LOC105160281 cDNA ORF clone, Sesamum indicum(sesame)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC105160281
Entrez Gene ID	105160281
Full Name	uncharacterized LOC105160281
Gene Type	protein-coding
Organism	Sesamum indicum(sesame)

mRNA and Protein(s)

mRNA	Protein	Name
XM_011077596.2	XP_011075898.1	uncharacterized protein LOC105160281

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Development and validation of genic-SSR markers in sesame by RNA-seq.
Zhang H, Wei L, Miao H, Zhang T, Wang C
BMC genomics13316(2012 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC105160281 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC105160281 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OSe118315	XM_011077596.2 Latest version!	Sesamum indicum uncharacterized LOC105160281 (LOC105160281), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$510.30 $729.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC105160281 ( XM_011077596.2 ) cDNA ORF clone, Sesamum indicum(sesame) -> XP_011075898.1 Sesamum indicum uncharacterized LOC105160281 (LOC105160281), mRNA.

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CloneID	OSe118315
Clone ID Related Accession (Same CDS sequence)	XM_011077596.2
Accession Version	XM_011077596.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2664bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-04-05
Organism	Sesamum indicum(sesame)
Product	uncharacterized protein LOC105160281
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_026148.1) and transcript sequence (JP645775.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 6, 2017 this sequence version replaced XM_011077596.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sesamum indicum Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 67 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGTCTTCCC GCTTCCAATC TGTCGTGCTT GGATCATCCC CCGTTTACCC TTCTGCCGTC 
GTTTGGTCCG ACGAGAACTT GGTGGCTGTG GCCTGTGGCA GTACTGTTTC AATCATGAAT 
CCTGGTAATC CTGTAGTTCG TGGTGTGATT ACCATCCCCT CCAGCGAGCC TTTTCCCCTT 
GGTGTGATTG ATGGTGGAGA GGAAGATTTG CTACATGGGT GCTTGCTACC ATTTCATTTA 
TCTCGGGATG CTCGCCCTTG TGTTAGATCA ATATCTTGGT CTCCTGTAGG CCTGGCCAAC 
AGTGCTGGTT GTTTGCTTGC TGTTTGTACC ACTGGGGGCC GTGTAAAGCT TTATCGCTTT 
CCTTTTTGCG AGTTTTCAGT GGAGTGGATA GAGGTTATGG ACGTATCTGA AATGCTGTAT 
AATTATTTCA AAACTACCAG TTTTGGGGAG TCAAACATAT CTTCAGAAAG TTCAGATGTG 
ACACTAAGAC GAGAGAGTGC AGATCATGAA TGTGCTAGTG ACCTGCCTGT TTCTAGTTTA 
GTAAAGGATT GCAAACGAAG AAAACGAAAT GCGGCTAGCG TAGCTGCACA AGATTGGCAA 
ATTATTCCTG TCTCTGGTCA TAATGGGAAG ACTCAGGAGA AAGTGAGTGC GGACTGCAAT 
CTCCCATTAA TAACTGTTCA GCAGTATGCT TCTCGCAGTG CAATGCTGAT GTCGCTTACA 
GTGGCTTGGT CTCCGATTCT GGGGACATCT GGGAATGGTG TTGCTATTCC TCATAACTCT 
TCCAATTACT GCTCTATTCT TGCCGTTGGA GGGAAGTGTG GTAGAATTTC GCTATGGAGG 
ATTCATGCAC CTGAGATCTA TTCTATTGAT TGTGCTAAGT GTTCAAGTAA AGTGTCACTT 
GTTGGCCTTC TGAAGGCACA TGATACTTGG ATCACAGCAA TTAATTGGGC ACTGTATGGC 
TCTGATGTTT CAAAACCCCA TCTCTTATTG GCTACGGGAA GTTCTGATGG TAGAGTGAAG 
ATCTGGCGGG TAAATGGTGA GGAACTGCTG ATGTCATCAG AAGTCATACA TGATTCATTT 
TCTTTGTTGA AGGAGGTTAT GATGGCTGAT TCTGCAACAA TCTCCGTGCT TTCACTTATT 
GTACCCATGC AAACGCCGTG GAAATTGCTC TTGGCTATTG GCAAAGGTTC TGGGTCAATT 
GAAGTCTGGA TGCTTGACAT GAGCATCACC AAATTTGAAA AAGTTGGTTG TTGTAATGCA 
CATCAGCGCA TTGTTACTGG TTTAGCTTGG GCTTTTGATG GATGTTGTTT GTACAGCTGC 
AGCCAGGACA ACTCTATGAA GAGCTGGATT TTAGTTGGAA ATTCCTTGTG TGAAGTGCCC 
AATCCTTCAC ATTCTCCTGG TTTGAAGAGC TCCCCAGATG TTCCTTATGT GTTTGACTCT 
TGCTTTGGCC TGGCAGTATC CCCTGGAAAT TTGGCAATTG CCGTGGCCCG CAAATATGAT 
GTTGATCTAT TAAATCCCAT GTACCAAGGA AGAACTCATA GAGCTGCTGT TGAGTTCCTT 
TGGATTGGAG GGCAGCAGCT GGATATTTCC TCCGAAGCCT GTCCAGATAT AGATATTGAA 
TCTTTTCCTG GATTACCTGA GAAAGTATTG ATTTGGTGGG AATGTAATAT GTTATGGTCT 
TTGAGCCAGT ATGAGAACCC CAGTAAGCTT CTGAATATTT GGGATATTGT GGCAGCTCTG 
CTGGCCTTCA AGCAGTCCGC ACCAGAGTAT GTAGAGCATA TCCTACTTAA GTGGCTGACA 
TCTTACTTTG GGTCCCAGTT TGGCAACTCT ACTACATTGT TATCTGAAGC CTTTAAGTTT 
CTGCCCAAGC TTTCATCCCG TCAGTTGCAC CTCATCAACA TTATCAGCAG GCATGTAGTG 
CTTAAAGAAA GTACACCAGA CCATATCAGT AGCAAACAGC AGGAATTAAA AGAAAGTACA 
CCAGACCATA TCAGTAGCAA ACAGCAGGAA TTAAAAGGGT TAAGTGTTAC CAAAGAACAG 
GTAAATTTAT GGATGGAGTT GCTTTTGAGC AGTGAAAATG AACTCTTGGA AAGACTTGTT 
GGTTTCAGTT TTTCTACTAT TTTGAGTCTG TTGTCCAATT CATCAGTGGA TTCTTTTGAA 
GTTGGTTGTG GGAGTCTAGA TGGATTGAGA CAAATGGAGC AGTGGGTATC ACACAATGAG 
AAAAATGTAA AGGATCAGAC CAAGTTTCTT GCAGCAAAAG TTGGAAAAGT TGAGAAAAGG 
AGATTACAGG GCATTATTGG ATATGAAATG GATGAGCAAT GTAATTTCTG TTCAGCTGTT 
GTCCCATTTG AATCAACAGA ATATGCAATT TGCTCTGGAG TAGACAGTGG TAATGGAGTT 
AGGCAGAGAC ATAAGCTAGA AAGATGTGCG ATTACTATGC GGATTCTCCC CACCAAACCT 
TCCTGGTATT GTATGTGTTG TCAAAGATGG GCAACGAGGT TGGCGCCTAG GATTTTATTC 
ACAATGTCTG AATATCCTTC TGATTTTAAA TCTTTTCTGG AGTCGCCTTC TTGCAAGGAC 
TCCTTACTAC CATGTTGTCT CTTTTGTGGG ATACTTCTAC AAAGATCACA GCCAGAACAT 
TCTCTGTCAC CATCTCCAGT ATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_011075898.1
CDS	158..2821
Translation	MSSRFQSVVLGSSPVYPSAVVWSDENLVAVACGSTVSIMNPGNPVVRGVITIPSSEPFPLGVIDGGEEDLLHGCLLPFHLSRDARPCVRSISWSPVGLANSAGCLLAVCTTGGRVKLYRFPFCEFSVEWIEVMDVSEMLYNYFKTTSFGESNISSESSDVTLRRESADHECASDLPVSSLVKDCKRRKRNAASVAAQDWQIIPVSGHNGKTQEKVSADCNLPLITVQQYASRSAMLMSLTVAWSPILGTSGNGVAIPHNSSNYCSILAVGGKCGRISLWRIHAPEIYSIDCAKCSSKVSLVGLLKAHDTWITAINWALYGSDVSKPHLLLATGSSDGRVKIWRVNGEELLMSSEVIHDSFSLLKEVMMADSATISVLSLIVPMQTPWKLLLAIGKGSGSIEVWMLDMSITKFEKVGCCNAHQRIVTGLAWAFDGCCLYSCSQDNSMKSWILVGNSLCEVPNPSHSPGLKSSPDVPYVFDSCFGLAVSPGNLAIAVARKYDVDLLNPMYQGRTHRAAVEFLWIGGQQLDISSEACPDIDIESFPGLPEKVLIWWECNMLWSLSQYENPSKLLNIWDIVAALLAFKQSAPEYVEHILLKWLTSYFGSQFGNSTTLLSEAFKFLPKLSSRQLHLINIISRHVVLKESTPDHISSKQQELKESTPDHISSKQQELKGLSVTKEQVNLWMELLLSSENELLERLVGFSFSTILSLLSNSSVDSFEVGCGSLDGLRQMEQWVSHNEKNVKDQTKFLAAKVGKVEKRRLQGIIGYEMDEQCNFCSAVVPFESTEYAICSGVDSGNGVRQRHKLERCAITMRILPTKPSWYCMCCQRWATRLAPRILFTMSEYPSDFKSFLESPSCKDSLLPCCLFCGILLQRSQPEHSLSPSPV

Target ORF information:

RefSeq Version	XM_011077596.2
Organism	Sesamum indicum(sesame)
Definition	Sesamum indicum uncharacterized LOC105160281 (LOC105160281), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_011077596.2

ORF Insert Sequence:

ATGTCTTCCC GCTTCCAATC TGTCGTGCTT GGATCATCCC CCGTTTACCC TTCTGCCGTC 
GTTTGGTCCG ACGAGAACTT GGTGGCTGTG GCCTGTGGCA GTACTGTTTC AATCATGAAT 
CCTGGTAATC CTGTAGTTCG TGGTGTGATT ACCATCCCCT CCAGCGAGCC TTTTCCCCTT 
GGTGTGATTG ATGGTGGAGA GGAAGATTTG CTACATGGGT GCTTGCTACC ATTTCATTTA 
TCTCGGGATG CTCGCCCTTG TGTTAGATCA ATATCTTGGT CTCCTGTAGG CCTGGCCAAC 
AGTGCTGGTT GTTTGCTTGC TGTTTGTACC ACTGGGGGCC GTGTAAAGCT TTATCGCTTT 
CCTTTTTGCG AGTTTTCAGT GGAGTGGATA GAGGTTATGG ACGTATCTGA AATGCTGTAT 
AATTATTTCA AAACTACCAG TTTTGGGGAG TCAAACATAT CTTCAGAAAG TTCAGATGTG 
ACACTAAGAC GAGAGAGTGC AGATCATGAA TGTGCTAGTG ACCTGCCTGT TTCTAGTTTA 
GTAAAGGATT GCAAACGAAG AAAACGAAAT GCGGCTAGCG TAGCTGCACA AGATTGGCAA 
ATTATTCCTG TCTCTGGTCA TAATGGGAAG ACTCAGGAGA AAGTGAGTGC GGACTGCAAT 
CTCCCATTAA TAACTGTTCA GCAGTATGCT TCTCGCAGTG CAATGCTGAT GTCGCTTACA 
GTGGCTTGGT CTCCGATTCT GGGGACATCT GGGAATGGTG TTGCTATTCC TCATAACTCT 
TCCAATTACT GCTCTATTCT TGCCGTTGGA GGGAAGTGTG GTAGAATTTC GCTATGGAGG 
ATTCATGCAC CTGAGATCTA TTCTATTGAT TGTGCTAAGT GTTCAAGTAA AGTGTCACTT 
GTTGGCCTTC TGAAGGCACA TGATACTTGG ATCACAGCAA TTAATTGGGC ACTGTATGGC 
TCTGATGTTT CAAAACCCCA TCTCTTATTG GCTACGGGAA GTTCTGATGG TAGAGTGAAG 
ATCTGGCGGG TAAATGGTGA GGAACTGCTG ATGTCATCAG AAGTCATACA TGATTCATTT 
TCTTTGTTGA AGGAGGTTAT GATGGCTGAT TCTGCAACAA TCTCCGTGCT TTCACTTATT 
GTACCCATGC AAACGCCGTG GAAATTGCTC TTGGCTATTG GCAAAGGTTC TGGGTCAATT 
GAAGTCTGGA TGCTTGACAT GAGCATCACC AAATTTGAAA AAGTTGGTTG TTGTAATGCA 
CATCAGCGCA TTGTTACTGG TTTAGCTTGG GCTTTTGATG GATGTTGTTT GTACAGCTGC 
AGCCAGGACA ACTCTATGAA GAGCTGGATT TTAGTTGGAA ATTCCTTGTG TGAAGTGCCC 
AATCCTTCAC ATTCTCCTGG TTTGAAGAGC TCCCCAGATG TTCCTTATGT GTTTGACTCT 
TGCTTTGGCC TGGCAGTATC CCCTGGAAAT TTGGCAATTG CCGTGGCCCG CAAATATGAT 
GTTGATCTAT TAAATCCCAT GTACCAAGGA AGAACTCATA GAGCTGCTGT TGAGTTCCTT 
TGGATTGGAG GGCAGCAGCT GGATATTTCC TCCGAAGCCT GTCCAGATAT AGATATTGAA 
TCTTTTCCTG GATTACCTGA GAAAGTATTG ATTTGGTGGG AATGTAATAT GTTATGGTCT 
TTGAGCCAGT ATGAGAACCC CAGTAAGCTT CTGAATATTT GGGATATTGT GGCAGCTCTG 
CTGGCCTTCA AGCAGTCCGC ACCAGAGTAT GTAGAGCATA TCCTACTTAA GTGGCTGACA 
TCTTACTTTG GGTCCCAGTT TGGCAACTCT ACTACATTGT TATCTGAAGC CTTTAAGTTT 
CTGCCCAAGC TTTCATCCCG TCAGTTGCAC CTCATCAACA TTATCAGCAG GCATGTAGTG 
CTTAAAGAAA GTACACCAGA CCATATCAGT AGCAAACAGC AGGAATTAAA AGAAAGTACA 
CCAGACCATA TCAGTAGCAA ACAGCAGGAA TTAAAAGGGT TAAGTGTTAC CAAAGAACAG 
GTAAATTTAT GGATGGAGTT GCTTTTGAGC AGTGAAAATG AACTCTTGGA AAGACTTGTT 
GGTTTCAGTT TTTCTACTAT TTTGAGTCTG TTGTCCAATT CATCAGTGGA TTCTTTTGAA 
GTTGGTTGTG GGAGTCTAGA TGGATTGAGA CAAATGGAGC AGTGGGTATC ACACAATGAG 
AAAAATGTAA AGGATCAGAC CAAGTTTCTT GCAGCAAAAG TTGGAAAAGT TGAGAAAAGG 
AGATTACAGG GCATTATTGG ATATGAAATG GATGAGCAAT GTAATTTCTG TTCAGCTGTT 
GTCCCATTTG AATCAACAGA ATATGCAATT TGCTCTGGAG TAGACAGTGG TAATGGAGTT 
AGGCAGAGAC ATAAGCTAGA AAGATGTGCG ATTACTATGC GGATTCTCCC CACCAAACCT 
TCCTGGTATT GTATGTGTTG TCAAAGATGG GCAACGAGGT TGGCGCCTAG GATTTTATTC 
ACAATGTCTG AATATCCTTC TGATTTTAAA TCTTTTCTGG AGTCGCCTTC TTGCAAGGAC 
TCCTTACTAC CATGTTGTCT CTTTTGTGGG ATACTTCTAC AAAGATCACA GCCAGAACAT 
TCTCTGTCAC CATCTCCAGT ATAA