Rbm38 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Rbm38
Entrez Gene ID	366262
Full Name	RNA binding motif protein 38
Synonyms	Rnpc1
General protein information	Preferred Names RNA binding motif protein 38 Names RNA-binding protein 38 RNA-binding region (RNP1, RRM) containing 1
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 3 Map Location: 3q42

mRNA and Protein(s)

mRNA	Protein	Name
XM_006235704.3	XP_006235766.1	RNA-binding protein 38 isoform X1
XM_008762528.2	XP_008760750.1	RNA-binding protein 38 isoform X2
NM_001108965.1	NP_001102435.1	RNA-binding protein 38

Pathways from BioSystems

Homologies

Rattus norvegicus (Norway rat)	Rbm38	NP_001102435.1
Canis lupus familiaris (dog)	RBM38	XP_005635266.1
Gallus gallus (chicken)	RBM38	XP_003642541.1

Gene Ontology
Bibliography

Related articles in PubMed

Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW
Cell149(6)1393-406(2012 Jun)

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Baltz AG, Munschauer M, Schwanh?usser B, Vasile A, Murakawa Y, Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E, Bonneau R, Selbach M, Dieterich C, Landthaler M
Molecular cell46(5)674-90(2012 Jun)

RNA-binding proteins Rbm38 and Rbm24 regulate myogenic differentiation via p21-dependent and -independent regulatory pathways.
Miyamoto S, Hidaka K, Jin D, Morisaki T
Genes to cells : devoted to molecular & cellular mechanisms14(11)1241-52(2009 Nov)

ESRP1 and ESRP2 are epithelial cell-type-specific regulators of FGFR2 splicing.
Warzecha CC, Sato TK, Nabet B, Hogenesch JB, Carstens RP
Molecular cell33(5)591-601(2009 Mar)

RNPC1, an RNA-binding protein and a target of the p53 family, is required for maintaining the stability of the basal and stress-induced p21 transcript.
Shu L, Yan W, Chen X
Genes & development20(21)2961-72(2006 Nov)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Rbm38 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Rbm38 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ORa00405	NM_001108965.1 Latest version!	Rattus norvegicus RNA binding motif protein 38 (Rbm38), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$69.30 $99.00
ORa26762	XM_006235704.3 Latest version!	Rattus norvegicus RNA binding motif protein 38 (Rbm38), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$139.30 $199.00
ORa48801	XM_008762528.2 Latest version!	Rattus norvegicus RNA binding motif protein 38 (Rbm38), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$139.30 $199.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Rbm38 ( NM_001108965.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001102435.1 Rattus norvegicus RNA binding motif protein 38 (Rbm38), mRNA.

Price & Availability↑

CloneID	ORa00405
Clone ID Related Accession (Same CDS sequence)	NM_001108965.1
Accession Version	NM_001108965.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 477bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-27
Organism	Rattus norvegicus(Norway rat)
Product	RNA-binding protein 38
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH474062.2. On or before Oct 4, 2007 this sequence version replaced XM_345477.3, XM_001054287.1. ##Evidence-Data-START## Transcript exon combination :: CO556461.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END##

ATGGCAGATC GGGCAGCAGC TGATAGGGCT TGCAAAGACC CTAACCCTAT CATCGATGGC 
CGCAAGGCCA ACGTGAACCT GGCCTACCTG GGTGCCAAGC CTAGGAGCCT GCAGACGGGC 
TTTGCCGTTG GTGTGCAGCA ACTACACCCC ACCTTGATCC AGCGCACCTA CGGGCTGACT 
CCCCACTACA TCTACCCACC AGCCATTGTA CAGCCCAGCG TGGTGATCCC TGCCACCCCT 
GTCCCGTCAC TGTCCTCGCC CTACCTTGAG TATACACCAG CCAGCCCAGC CTACGCTCAG 
TACCCTCCAG CCACTTACGA CCAGTACCCA TACGCCGCCT CGCCTGCCAC GGCCACCAGC 
TTCGTGGGCT ATGGCTACCC TGCCGCCATT CCCCCAGCCT TGTCTGCCAC GGCACCTGCA 
GGCACCACCT TCGTGCAGTA CCAGGCACCT CAGCTACAGC CTGACAGGAT GCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001102435.1
CDS	901..1377
Translation	MADRAAADRACKDPNPIIDGRKANVNLAYLGAKPRSLQTGFAVGVQQLHPTLIQRTYGLTPHYIYPPAIVQPSVVIPATPVPSLSSPYLEYTPASPAYAQYPPATYDQYPYAASPATATSFVGYGYPAAIPPALSATAPAGTTFVQYQAPQLQPDRMQ

Target ORF information:

RefSeq Version	NM_001108965.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus RNA binding motif protein 38 (Rbm38), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001108965.1

ORF Insert Sequence:

ATGGCAGATC GGGCAGCAGC TGATAGGGCT TGCAAAGACC CTAACCCTAT CATCGATGGC 
CGCAAGGCCA ACGTGAACCT GGCCTACCTG GGTGCCAAGC CTAGGAGCCT GCAGACGGGC 
TTTGCCGTTG GTGTGCAGCA ACTACACCCC ACCTTGATCC AGCGCACCTA CGGGCTGACT 
CCCCACTACA TCTACCCACC AGCCATTGTA CAGCCCAGCG TGGTGATCCC TGCCACCCCT 
GTCCCGTCAC TGTCCTCGCC CTACCTTGAG TATACACCAG CCAGCCCAGC CTACGCTCAG 
TACCCTCCAG CCACTTACGA CCAGTACCCA TACGCCGCCT CGCCTGCCAC GGCCACCAGC 
TTCGTGGGCT ATGGCTACCC TGCCGCCATT CCCCCAGCCT TGTCTGCCAC GGCACCTGCA 
GGCACCACCT TCGTGCAGTA CCAGGCACCT CAGCTACAGC CTGACAGGAT GCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Rbm38 ( XM_006235704.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006235766.1 Rattus norvegicus RNA binding motif protein 38 (Rbm38), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa26762
Clone ID Related Accession (Same CDS sequence)	XM_006235704.3
Accession Version	XM_006235704.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 714bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	RNA-binding protein 38 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006235704.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCTGCTGC AGCCCGCGTG CGCCCCGAGT GTGTTTCCGC GGCCGTCCGC CGCCCCCAGC 
GCCATGCACG GCTCACAGAA GGACACCACG TTCACCAAGA TCTTCGTGGG CGGCCTGCCC 
TACCACACCA CCGACGCATC GCTCAGAAAG TACTTCGAGG GCTTTGGAGA CATCGAGGAG 
GCCGTGGTCA TCACCGACCG CCAGACCGGC AAGTCCCGCG GCTACGGCTT CGTGACCATG 
GCAGATCGGG CAGCAGCTGA TAGGGCTTGC AAAGACCCTA ACCCTATCAT CGATGGCCGC 
AAGGCCAACG TGAACCTGGC CTACCTGGGT GCCAAGCCTA GGAGCCTGCA GACGGGCTTT 
GCCGTTGGTG TGCAGCAACT ACACCCCACC TTGATCCAGC GCACCTACGG GCTGACTCCC 
CACTACATCT ACCCACCAGC CATTGTACAG CCCAGCGTGG TGATCCCTGC CACCCCTGTC 
CCGTCACTGT CCTCGCCCTA CCTTGAGTAT ACACCAGCCA GCCCAGCCTA CGCTCAGTAC 
CCTCCAGCCA CTTACGACCA GTACCCATAC GCCGCCTCGC CTGCCACGGC CACCAGCTTC 
GTGGGCTATG GCTACCCTGC CGCCATTCCC CCAGCCTTGT CTGCCACGGC ACCTGCAGGC 
ACCACCTTCG TGCAGTACCA GGCACCTCAG CTACAGCCTG ACAGGATGCA GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006235766.1
CDS	135..848
Translation	MLLQPACAPSVFPRPSAAPSAMHGSQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKDPNPIIDGRKANVNLAYLGAKPRSLQTGFAVGVQQLHPTLIQRTYGLTPHYIYPPAIVQPSVVIPATPVPSLSSPYLEYTPASPAYAQYPPATYDQYPYAASPATATSFVGYGYPAAIPPALSATAPAGTTFVQYQAPQLQPDRMQ

Target ORF information:

RefSeq Version	XM_006235704.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus RNA binding motif protein 38 (Rbm38), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006235704.3

ORF Insert Sequence:

ATGCTGCTGC AGCCCGCGTG CGCCCCGAGT GTGTTTCCGC GGCCGTCCGC CGCCCCCAGC 
GCCATGCACG GCTCACAGAA GGACACCACG TTCACCAAGA TCTTCGTGGG CGGCCTGCCC 
TACCACACCA CCGACGCATC GCTCAGAAAG TACTTCGAGG GCTTTGGAGA CATCGAGGAG 
GCCGTGGTCA TCACCGACCG CCAGACCGGC AAGTCCCGCG GCTACGGCTT CGTGACCATG 
GCAGATCGGG CAGCAGCTGA TAGGGCTTGC AAAGACCCTA ACCCTATCAT CGATGGCCGC 
AAGGCCAACG TGAACCTGGC CTACCTGGGT GCCAAGCCTA GGAGCCTGCA GACGGGCTTT 
GCCGTTGGTG TGCAGCAACT ACACCCCACC TTGATCCAGC GCACCTACGG GCTGACTCCC 
CACTACATCT ACCCACCAGC CATTGTACAG CCCAGCGTGG TGATCCCTGC CACCCCTGTC 
CCGTCACTGT CCTCGCCCTA CCTTGAGTAT ACACCAGCCA GCCCAGCCTA CGCTCAGTAC 
CCTCCAGCCA CTTACGACCA GTACCCATAC GCCGCCTCGC CTGCCACGGC CACCAGCTTC 
GTGGGCTATG GCTACCCTGC CGCCATTCCC CCAGCCTTGT CTGCCACGGC ACCTGCAGGC 
ACCACCTTCG TGCAGTACCA GGCACCTCAG CTACAGCCTG ACAGGATGCA GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Rbm38 ( XM_008762528.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_008760750.1 Rattus norvegicus RNA binding motif protein 38 (Rbm38), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ORa48801
Clone ID Related Accession (Same CDS sequence)	XM_008762528.2
Accession Version	XM_008762528.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 801bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	RNA-binding protein 38 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008762528.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCTGCTGC AGCCCGCGTG CGCCCCGAGT GTGTTTCCGC GGCCGTCCGC CGCCCCCAGC 
GCCATGCACG GCTCACAGAA GGACACCACG TTCACCAAGA TCTTCGTGGG CGGCCTGCCC 
TACCACACCA CCGACGCATC GCTCAGAAAG TACTTCGAGG GCTTTGGAGA CATCGAGGAG 
GCCGTGGTCA TCACCGACCG CCAGACCGGC AAGTCCCGCG GCTACGGCTT CGGGATTGTC 
GCTGCCCTTG AAGGCACTCA GAACTTGAAC TCGGGAAGGA GCTGCAGTCC TGGAGGCAGA 
GAAGACAGTG CCCCAAGGGT GACCATGGCA GATCGGGCAG CAGCTGATAG GGCTTGCAAA 
GACCCTAACC CTATCATCGA TGGCCGCAAG GCCAACGTGA ACCTGGCCTA CCTGGGTGCC 
AAGCCTAGGA GCCTGCAGAC GGGCTTTGCC GTTGGTGTGC AGCAACTACA CCCCACCTTG 
ATCCAGCGCA CCTACGGGCT GACTCCCCAC TACATCTACC CACCAGCCAT TGTACAGCCC 
AGCGTGGTGA TCCCTGCCAC CCCTGTCCCG TCACTGTCCT CGCCCTACCT TGAGTATACA 
CCAGCCAGCC CAGCCTACGC TCAGTACCCT CCAGCCACTT ACGACCAGTA CCCATACGCC 
GCCTCGCCTG CCACGGCCAC CAGCTTCGTG GGCTATGGCT ACCCTGCCGC CATTCCCCCA 
GCCTTGTCTG CCACGGCACC TGCAGGCACC ACCTTCGTGC AGTACCAGGC ACCTCAGCTA 
CAGCCTGACA GGATGCAGTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008760750.1
CDS	144..944
Translation	MLLQPACAPSVFPRPSAAPSAMHGSQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFGIVAALEGTQNLNSGRSCSPGGREDSAPRVTMADRAAADRACKDPNPIIDGRKANVNLAYLGAKPRSLQTGFAVGVQQLHPTLIQRTYGLTPHYIYPPAIVQPSVVIPATPVPSLSSPYLEYTPASPAYAQYPPATYDQYPYAASPATATSFVGYGYPAAIPPALSATAPAGTTFVQYQAPQLQPDRMQ

Target ORF information:

RefSeq Version	XM_008762528.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus RNA binding motif protein 38 (Rbm38), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008762528.2

ORF Insert Sequence:

ATGCTGCTGC AGCCCGCGTG CGCCCCGAGT GTGTTTCCGC GGCCGTCCGC CGCCCCCAGC 
GCCATGCACG GCTCACAGAA GGACACCACG TTCACCAAGA TCTTCGTGGG CGGCCTGCCC 
TACCACACCA CCGACGCATC GCTCAGAAAG TACTTCGAGG GCTTTGGAGA CATCGAGGAG 
GCCGTGGTCA TCACCGACCG CCAGACCGGC AAGTCCCGCG GCTACGGCTT CGGGATTGTC 
GCTGCCCTTG AAGGCACTCA GAACTTGAAC TCGGGAAGGA GCTGCAGTCC TGGAGGCAGA 
GAAGACAGTG CCCCAAGGGT GACCATGGCA GATCGGGCAG CAGCTGATAG GGCTTGCAAA 
GACCCTAACC CTATCATCGA TGGCCGCAAG GCCAACGTGA ACCTGGCCTA CCTGGGTGCC 
AAGCCTAGGA GCCTGCAGAC GGGCTTTGCC GTTGGTGTGC AGCAACTACA CCCCACCTTG 
ATCCAGCGCA CCTACGGGCT GACTCCCCAC TACATCTACC CACCAGCCAT TGTACAGCCC 
AGCGTGGTGA TCCCTGCCAC CCCTGTCCCG TCACTGTCCT CGCCCTACCT TGAGTATACA 
CCAGCCAGCC CAGCCTACGC TCAGTACCCT CCAGCCACTT ACGACCAGTA CCCATACGCC 
GCCTCGCCTG CCACGGCCAC CAGCTTCGTG GGCTATGGCT ACCCTGCCGC CATTCCCCCA 
GCCTTGTCTG CCACGGCACC TGCAGGCACC ACCTTCGTGC AGTACCAGGC ACCTCAGCTA 
CAGCCTGACA GGATGCAGTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Cell149(6)1393-406(2012 Jun)
Castello A,Fischer B,Eichelbaum K,Horos R,Beckmann BM,Strein C,Davey NE,Humphreys DT,Preiss T,Steinmetz LM,Krijgsveld J,Hentze MW

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Molecular cell46(5)674-90(2012 Jun)
Baltz AG,Munschauer M,Schwanh?usser B,Vasile A,Murakawa Y,Schueler M,Youngs N,Penfold-Brown D,Drew K,Milek M,Wyler E,Bonneau R,Selbach M,Dieterich C,Landthaler M

RNA-binding proteins Rbm38 and Rbm24 regulate myogenic differentiation via p21-dependent and -independent regulatory pathways.
Genes to cells : devoted to molecular & cellular mechanisms14(11)1241-52(2009 Nov)
Miyamoto S,Hidaka K,Jin D,Morisaki T

ESRP1 and ESRP2 are epithelial cell-type-specific regulators of FGFR2 splicing.
Molecular cell33(5)591-601(2009 Mar)
Warzecha CC,Sato TK,Nabet B,Hogenesch JB,Carstens RP

RNPC1, an RNA-binding protein and a target of the p53 family, is required for maintaining the stability of the basal and stress-induced p21 transcript.
Genes & development20(21)2961-72(2006 Nov)
Shu L,Yan W,Chen X