LOC108823827 cDNA ORF clone, Raphanus sativus(radish)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC108823827
Entrez Gene ID	108823827
Full Name	pentatricopeptide repeat-containing protein At3g26782, mitochondrial
Gene Type	protein-coding
Organism	Raphanus sativus(radish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_018597109.1	XP_018452611.1	pentatricopeptide repeat-containing protein At3g26782, mitochondrial

Pathways from BioSystems
Gene Ontology

The following LOC108823827 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC108823827 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORc40562	XM_018597109.1 Latest version!	Raphanus sativus pentatricopeptide repeat-containing protein At3g26782, mitochondrial (LOC108823827), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC108823827 ( XM_018597109.1 ) cDNA ORF clone, Raphanus sativus(radish) -> XP_018452611.1 Raphanus sativus pentatricopeptide repeat-containing protein At3g26782, mitochondrial (LOC108823827), mRNA.

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CloneID	ORc40562
Clone ID Related Accession (Same CDS sequence)	XM_018597109.1
Accession Version	XM_018597109.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1983bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-10-03
Organism	Raphanus sativus(radish)
Product	pentatricopeptide repeat-containing protein At3g26782, mitochondrial
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017353147.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Raphanus sativus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAAGGTTC CAAGTAAAAA AACTCTCATC TCATCCGTCT CCCGTCTCCT TCACACGGAG 
AGACAACAAA CAGACAGACA AAACCTAACA ACTCTCTTCA ACAGATACGT CGACAAGACA 
GACGTCTTCT CATGGAACTC CGTCATCGCC GACCTCGCTC GCAGCAACGA CTCCTCCGAA 
GCTCTCCGCG CTTTTTCCTC CATGCGAAAG CTCTCACTCC ACCCTAACCG CTCCACTCTC 
CCCTGCGCCA TCAAAGCCTG CTCCTCTCTC CTCGATCTCT CCTCCGGCAA GCAGACCCAC 
CAGCAAGCCT TCGTCTTCGG CTACCACTCC GACGTCTTCG TGTCTTCCGC CTTGATCGCC 
ATGTACTCGA CTTGCGGCGA AGTCGACGAT GCGCGCAAGG TGTTCGACGA AATGACTGTG 
AGAAATATCG TTTGCTGGAC GTCGATGATT CGTGGGTATG ATCTTAACGG TAACGCCGTT 
AACGCCGTTT CTCTTTTCAA GGATTTGTTA ATCGATGAAA GTGATCATGA AGATGCGATG 
TTGGTGGATT CTAAGGGTAT GGTTTCGGTC ATCTCTGCTT GTTCTCGTGT GGCTGCTAAG 
GGCTTAACGG AGTCAATCCA CGGATTTGTG GTGAAGAGAG GGTTTGAGAG AGGAGTAAGC 
GTTGGTAACA CTCTCTTAGA TGCTTATGCT AAAGGCCGAG AAGGAGGTGT GGCTGTAGCT 
AGAAGAATCT TTGATCAGAT TGTGGGTAAA GACTCTGTTT CGTATAATTC GATTATGAGT 
GTTTATGCTC AGAACGGGAT GTCTAATGAG GCTTTCGATG TGTTCCGGAT ACTGATGAAG 
GATAAAGGTG TGACCTTTAA CTCGATCACG CTGTCTACTG TATTGCTCGC TGTTTCGCAC 
TCAGGTGCTC TGCGTGTAGG GAAGTGCGTG CATGATCAGG TGATTAGGAT GGGTCTCGAG 
GATGATGTGA TAGTCGGGAC TTCGATGATT GATATGTACT GCAAATGCGG GAGAGTTGAG 
ACGGCGAGGA AAGTGTTTGA TCGGATGAGA AAGAAGAATG TGAGGACGTG GACGGCCATG 
ATTGCTGGAT ACGGAATGCA CGGCCACGCG GGCAAGGCGT TAGAGTTGTT CCCTGTTATG 
ATAAGTTCAG GAGTTCGACC AAACTACATT ACTTTTGTCT CGGTGTTAGC TGCTTGCAGC 
CACGCTGGTC TTCACGTGGA AGGCTGGCGT TGGTTCAACG CGATGAAGGG GAGATTTGGG 
GTGGAACCGG GGCTAGAGCA CTACGGTTGT ATGGTTGATC TCTTAGGTCG GGCAGGGTAT 
CTTCAGAAGG CTTATGATTT GATACAGACG ATGAAGATGA AACCGGACTC TGTCATCTGG 
AGCTCGATTC TTGCAGCGTG TAGGGTTCAC AAGAACGTGG AGCTTGCTGA GATATCCGTG 
GCGCGTTTGT TTGAGCTGGA TCCTTCGAAC TGCGGTTACT ACATGTTGCT TTCGCATATT 
TACGCTGATG CGGGGCGTTG GAAAGACGTT GAGAGGGTGA GGACGGTGAT GAGGAAGCGT 
GGATTGGTGA AACCTCCAGG GTTTAGTCTG CTTGAGTTGA ACGGTGAGGT TCATGTGTTC 
TTGATCGGAG ACGAAGAGCA TCCCAAGCGC GACGAGATTT ACGAGTTTTT AGAGGAGTTG 
AACGTGAAGC TGTTGGAAGC GGGTTACGTG TCGAACACGG CGTCGGTGTG TCATGATGTT 
GATGAGGAAG AGAAGGAGAT GACGCTGAGG GTTCACAGCG AGAAGCTGGC GGTTGCGTTT 
GGGATCATGA ACACGGTCCC TGGCTCGACG GTGAATGTGG TTAAGAATCT GAGGGTTTGT 
AGTGATTGTC ATAATGTGAT CAAGTTGATT TCAAAGATTG TTGATAGAGA GTTTGTGGTT 
AGAGATGCGA AGCGGTTTCA CCATTTCAAA AATGGATTTT GTTCTTGTGG AGATTACTGG 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_018452611.1
CDS	15..1997
Translation	MKVPSKKTLISSVSRLLHTERQQTDRQNLTTLFNRYVDKTDVFSWNSVIADLARSNDSSEALRAFSSMRKLSLHPNRSTLPCAIKACSSLLDLSSGKQTHQQAFVFGYHSDVFVSSALIAMYSTCGEVDDARKVFDEMTVRNIVCWTSMIRGYDLNGNAVNAVSLFKDLLIDESDHEDAMLVDSKGMVSVISACSRVAAKGLTESIHGFVVKRGFERGVSVGNTLLDAYAKGREGGVAVARRIFDQIVGKDSVSYNSIMSVYAQNGMSNEAFDVFRILMKDKGVTFNSITLSTVLLAVSHSGALRVGKCVHDQVIRMGLEDDVIVGTSMIDMYCKCGRVETARKVFDRMRKKNVRTWTAMIAGYGMHGHAGKALELFPVMISSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGYLQKAYDLIQTMKMKPDSVIWSSILAACRVHKNVELAEISVARLFELDPSNCGYYMLLSHIYADAGRWKDVERVRTVMRKRGLVKPPGFSLLELNGEVHVFLIGDEEHPKRDEIYEFLEELNVKLLEAGYVSNTASVCHDVDEEEKEMTLRVHSEKLAVAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKNGFCSCGDYW

Target ORF information:

RefSeq Version	XM_018597109.1
Organism	Raphanus sativus(radish)
Definition	Raphanus sativus pentatricopeptide repeat-containing protein At3g26782, mitochondrial (LOC108823827), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_018597109.1

ORF Insert Sequence:

ATGAAGGTTC CAAGTAAAAA AACTCTCATC TCATCCGTCT CCCGTCTCCT TCACACGGAG 
AGACAACAAA CAGACAGACA AAACCTAACA ACTCTCTTCA ACAGATACGT CGACAAGACA 
GACGTCTTCT CATGGAACTC CGTCATCGCC GACCTCGCTC GCAGCAACGA CTCCTCCGAA 
GCTCTCCGCG CTTTTTCCTC CATGCGAAAG CTCTCACTCC ACCCTAACCG CTCCACTCTC 
CCCTGCGCCA TCAAAGCCTG CTCCTCTCTC CTCGATCTCT CCTCCGGCAA GCAGACCCAC 
CAGCAAGCCT TCGTCTTCGG CTACCACTCC GACGTCTTCG TGTCTTCCGC CTTGATCGCC 
ATGTACTCGA CTTGCGGCGA AGTCGACGAT GCGCGCAAGG TGTTCGACGA AATGACTGTG 
AGAAATATCG TTTGCTGGAC GTCGATGATT CGTGGGTATG ATCTTAACGG TAACGCCGTT 
AACGCCGTTT CTCTTTTCAA GGATTTGTTA ATCGATGAAA GTGATCATGA AGATGCGATG 
TTGGTGGATT CTAAGGGTAT GGTTTCGGTC ATCTCTGCTT GTTCTCGTGT GGCTGCTAAG 
GGCTTAACGG AGTCAATCCA CGGATTTGTG GTGAAGAGAG GGTTTGAGAG AGGAGTAAGC 
GTTGGTAACA CTCTCTTAGA TGCTTATGCT AAAGGCCGAG AAGGAGGTGT GGCTGTAGCT 
AGAAGAATCT TTGATCAGAT TGTGGGTAAA GACTCTGTTT CGTATAATTC GATTATGAGT 
GTTTATGCTC AGAACGGGAT GTCTAATGAG GCTTTCGATG TGTTCCGGAT ACTGATGAAG 
GATAAAGGTG TGACCTTTAA CTCGATCACG CTGTCTACTG TATTGCTCGC TGTTTCGCAC 
TCAGGTGCTC TGCGTGTAGG GAAGTGCGTG CATGATCAGG TGATTAGGAT GGGTCTCGAG 
GATGATGTGA TAGTCGGGAC TTCGATGATT GATATGTACT GCAAATGCGG GAGAGTTGAG 
ACGGCGAGGA AAGTGTTTGA TCGGATGAGA AAGAAGAATG TGAGGACGTG GACGGCCATG 
ATTGCTGGAT ACGGAATGCA CGGCCACGCG GGCAAGGCGT TAGAGTTGTT CCCTGTTATG 
ATAAGTTCAG GAGTTCGACC AAACTACATT ACTTTTGTCT CGGTGTTAGC TGCTTGCAGC 
CACGCTGGTC TTCACGTGGA AGGCTGGCGT TGGTTCAACG CGATGAAGGG GAGATTTGGG 
GTGGAACCGG GGCTAGAGCA CTACGGTTGT ATGGTTGATC TCTTAGGTCG GGCAGGGTAT 
CTTCAGAAGG CTTATGATTT GATACAGACG ATGAAGATGA AACCGGACTC TGTCATCTGG 
AGCTCGATTC TTGCAGCGTG TAGGGTTCAC AAGAACGTGG AGCTTGCTGA GATATCCGTG 
GCGCGTTTGT TTGAGCTGGA TCCTTCGAAC TGCGGTTACT ACATGTTGCT TTCGCATATT 
TACGCTGATG CGGGGCGTTG GAAAGACGTT GAGAGGGTGA GGACGGTGAT GAGGAAGCGT 
GGATTGGTGA AACCTCCAGG GTTTAGTCTG CTTGAGTTGA ACGGTGAGGT TCATGTGTTC 
TTGATCGGAG ACGAAGAGCA TCCCAAGCGC GACGAGATTT ACGAGTTTTT AGAGGAGTTG 
AACGTGAAGC TGTTGGAAGC GGGTTACGTG TCGAACACGG CGTCGGTGTG TCATGATGTT 
GATGAGGAAG AGAAGGAGAT GACGCTGAGG GTTCACAGCG AGAAGCTGGC GGTTGCGTTT 
GGGATCATGA ACACGGTCCC TGGCTCGACG GTGAATGTGG TTAAGAATCT GAGGGTTTGT 
AGTGATTGTC ATAATGTGAT CAAGTTGATT TCAAAGATTG TTGATAGAGA GTTTGTGGTT 
AGAGATGCGA AGCGGTTTCA CCATTTCAAA AATGGATTTT GTTCTTGTGG AGATTACTGG 
TGA