LOC7494456 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7494456 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7494456 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa21965 XM_002312981.2
Latest version!
Populus trichocarpa hypothetical protein (POPTR_0009s12570g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
OPa436059 XM_024608361.1
Latest version!
Populus trichocarpa protein DETOXIFICATION 46, chloroplastic (LOC7494456), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OPa21965
    Clone ID Related Accession (Same CDS sequence) XM_002312981.2
    Accession Version XM_002312981.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1668bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008475). On Dec 16, 2013 this sequence version replaced XM_002312981.1.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGCAAATCA AAACCCTAAT TCATTCTTCA ACAATTCCAT TTCAAAACCC TAATTTTAAA 
    AAACATCCAC AACCATCAAT TCTATTAAAA AACCCACCTA TCCATCTCCT TCAAAGTCCC
    AAAGTTCCTG CAAAATTAAA CATTTTGACA CCAAGAAATC ATCTTTATGG TTTGAAAGCC
    AATCTTAGTA GCCAAAGTCG AGAACTTTTC GATACTAACA ATGAAATTGA GGGAGAAAAT
    GACAGTAAAA CTGGCTCAAT TTTGGAAGAA GAGGAGATAA AAGTGGATAT GAATAGAGAG
    GGATTGGAGA ATCAGAGTTT ATGGAGTCAA ATAAAGGAGA TTGTTTTGTT TACAGGACCT
    GCTACAGGGC TTTGGTTATG TGGGCCATTA ATGAGTCTAA TTGATACTGT GGTTATTGGT
    CAAGGGAGTT ACATTGAACT TGCCGCTTTA GGACCTGCGA CGGTTTTATG TGATTATATG
    AGTTATGTGT TCATGTTCCT TTCAATTGCC ACTTCGAATA TGGTTGCAAC TTACCTTGCC
    AGACGGGATA AAAATCAAGT GCAGCATCAA ATATCTATCC TTCTCTTTGT CGGGATGACT
    TGTGGCTTGC TTATGCTCTT GTTTACAAGA TTATTTGGTT CATGGGCACT AACTGCTTTC
    TCAGGACCAA AAAATGCACA AATTCTACCT GCAGCAAATA CATACGTTCA GATTCGAGGC
    CTAGCATGGC CTGCAGTTCT TGTAGGATGG GTTGCTCAAA GTGCAAGTCT CGGCATGAAA
    GATTCGTGGG GGCCTCTGAA GGCTTTGGCG GTTTCTAGTG TTGTAAATGG TGTTGGTGAT
    GTAGTCCTCT GCAGCTTTTT AGGCTATGGA ATTGCTGGTG CTGCATGGGC CACAATGGTG
    TCACAGGTTA TTGCAGCTTA TATGATGATA GAAGCTTTGA ACAAAAAAGG ATACAATGCA
    TTTTCCATCT CTGTTCCAAC ACCTGACGAA ATCCTGACAG TAATTGGGCT TGCTGCTCCA
    GTGTTTGTGA CAATGATATC AAAGGTGGCT TTCTATTCTC TCATGATATA TTTTGCGACA
    TCTATGGGCA CACATTCCGT GGCTGCTCAT CAGGTCATGC TTCAAATAAT GGGTATGTGC
    ACAGTAATGG GCGAGCCTCT CTCACAAACT GCACAATCAT TTATGCCTGA GTTGATATAT
    GGTGTCAATC GAAGTTTGGA AAAGGCTCGA AGGCTGCTAA AATCACTTGT CACAATTGGG
    GCTACAATGG GATTGCTTCT AGGGACCATT GGTACATTTG CTCCTTGGTT GTTCCCAAAT
    ATCTTTACAC GCGATCAGAA GGTCATACAG GAGATGTACA AAGTGCTGTT ACCGTTCTTT
    ATGGCAATTG CTGTGACACC TAGCATTCAT TGCCTCGAGG GGACACTGTT GGCTGGACGG
    GATCTTAGAT TCCTTAGCTT TTCAATGACT GGATGCTTTT CTTTGGGTGC TATTGTACTG
    ATGCTTTTTA GCAGGAGAGG ATATGGTTTG CCTGGCTGTT GGTATGCACT TGTAGGATTT
    CAATGGGCCC GATTTTTCCT TTCTCTTCGG CGACTTCTTT CTCCTGATGG CATACTTTTC
    TCCGAGGACT TGAGCCGCTA TAAAATGGAG AAGCTGAAAG TTACTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002313017.2
    CDS104..1771
    Translation

    Target ORF information:

    RefSeq Version XM_002312981.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0009s12570g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002312981.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGCAAATCA AAACCCTAAT TCATTCTTCA ACAATTCCAT TTCAAAACCC TAATTTTAAA 
    AAACATCCAC AACCATCAAT TCTATTAAAA AACCCACCTA TCCATCTCCT TCAAAGTCCC
    AAAGTTCCTG CAAAATTAAA CATTTTGACA CCAAGAAATC ATCTTTATGG TTTGAAAGCC
    AATCTTAGTA GCCAAAGTCG AGAACTTTTC GATACTAACA ATGAAATTGA GGGAGAAAAT
    GACAGTAAAA CTGGCTCAAT TTTGGAAGAA GAGGAGATAA AAGTGGATAT GAATAGAGAG
    GGATTGGAGA ATCAGAGTTT ATGGAGTCAA ATAAAGGAGA TTGTTTTGTT TACAGGACCT
    GCTACAGGGC TTTGGTTATG TGGGCCATTA ATGAGTCTAA TTGATACTGT GGTTATTGGT
    CAAGGGAGTT ACATTGAACT TGCCGCTTTA GGACCTGCGA CGGTTTTATG TGATTATATG
    AGTTATGTGT TCATGTTCCT TTCAATTGCC ACTTCGAATA TGGTTGCAAC TTACCTTGCC
    AGACGGGATA AAAATCAAGT GCAGCATCAA ATATCTATCC TTCTCTTTGT CGGGATGACT
    TGTGGCTTGC TTATGCTCTT GTTTACAAGA TTATTTGGTT CATGGGCACT AACTGCTTTC
    TCAGGACCAA AAAATGCACA AATTCTACCT GCAGCAAATA CATACGTTCA GATTCGAGGC
    CTAGCATGGC CTGCAGTTCT TGTAGGATGG GTTGCTCAAA GTGCAAGTCT CGGCATGAAA
    GATTCGTGGG GGCCTCTGAA GGCTTTGGCG GTTTCTAGTG TTGTAAATGG TGTTGGTGAT
    GTAGTCCTCT GCAGCTTTTT AGGCTATGGA ATTGCTGGTG CTGCATGGGC CACAATGGTG
    TCACAGGTTA TTGCAGCTTA TATGATGATA GAAGCTTTGA ACAAAAAAGG ATACAATGCA
    TTTTCCATCT CTGTTCCAAC ACCTGACGAA ATCCTGACAG TAATTGGGCT TGCTGCTCCA
    GTGTTTGTGA CAATGATATC AAAGGTGGCT TTCTATTCTC TCATGATATA TTTTGCGACA
    TCTATGGGCA CACATTCCGT GGCTGCTCAT CAGGTCATGC TTCAAATAAT GGGTATGTGC
    ACAGTAATGG GCGAGCCTCT CTCACAAACT GCACAATCAT TTATGCCTGA GTTGATATAT
    GGTGTCAATC GAAGTTTGGA AAAGGCTCGA AGGCTGCTAA AATCACTTGT CACAATTGGG
    GCTACAATGG GATTGCTTCT AGGGACCATT GGTACATTTG CTCCTTGGTT GTTCCCAAAT
    ATCTTTACAC GCGATCAGAA GGTCATACAG GAGATGTACA AAGTGCTGTT ACCGTTCTTT
    ATGGCAATTG CTGTGACACC TAGCATTCAT TGCCTCGAGG GGACACTGTT GGCTGGACGG
    GATCTTAGAT TCCTTAGCTT TTCAATGACT GGATGCTTTT CTTTGGGTGC TATTGTACTG
    ATGCTTTTTA GCAGGAGAGG ATATGGTTTG CCTGGCTGTT GGTATGCACT TGTAGGATTT
    CAATGGGCCC GATTTTTCCT TTCTCTTCGG CGACTTCTTT CTCCTGATGG CATACTTTTC
    TCCGAGGACT TGAGCCGCTA TAAAATGGAG AAGCTGAAAG TTACTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa436059
    Clone ID Related Accession (Same CDS sequence) XM_024608361.1
    Accession Version XM_024608361.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1668bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product protein DETOXIFICATION 46, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037293.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGCAAATCA AAACCCTAAT TCATTCTTCA ACAATTCCAT TTCAAAACCC TAATTTTAAA 
    AAACATCCAC AACCATCAAT TCTATTAAAA AACCCACCTA TCCATCTCCT TCAAAGTCCC
    AAAGTTCCTG CAAAATTAAA CATTTTGACA CCAAGAAATC ATCTTTATGG TTTGAAAGCC
    AATCTTAGTA GCCAAAGTCG AGAACTTTTC GATACTAACA ATGAAATTGA GGGAGAAAAT
    GACAGTAAAA CTGGCTCAAT TTTGGAAGAA GAGGAGATAA AAGTGGATAT GAATAGAGAG
    GGATTGGAGA ATCAGAGTTT ATGGAGTCAA ATAAAGGAGA TTGTTTTGTT TACAGGACCT
    GCTACAGGGC TTTGGTTATG TGGGCCATTA ATGAGTCTAA TTGATACTGT GGTTATTGGT
    CAAGGGAGTT ACATTGAACT TGCCGCTTTA GGACCTGCGA CGGTTTTATG TGATTATATG
    AGTTATGTGT TCATGTTCCT TTCAATTGCC ACTTCGAATA TGGTTGCAAC TTACCTTGCC
    AGACGGGATA AAAATCAAGT GCAGCATCAA ATATCTATCC TTCTCTTTGT CGGGATGACT
    TGTGGCTTGC TTATGCTCTT GTTTACAAGA TTATTTGGTT CATGGGCACT AACTGCTTTC
    TCAGGACCAA AAAATGCACA AATTCTACCT GCAGCAAATA CATACGTTCA GATTCGAGGC
    CTAGCATGGC CTGCAGTTCT TGTAGGATGG GTTGCTCAAA GTGCAAGTCT CGGCATGAAA
    GATTCGTGGG GGCCTCTGAA GGCTTTGGCG GTTTCTAGTG TTGTAAATGG TGTTGGTGAT
    GTAGTCCTCT GCAGCTTTTT AGGCTATGGA ATTGCTGGTG CTGCATGGGC CACAATGGTG
    TCACAGGTTA TTGCAGCTTA TATGATGATA GAAGCTTTGA ACAAAAAAGG ATACAATGCA
    TTTTCCATCT CTGTTCCAAC ACCTGACGAA ATCCTGACAG TAATTGGGCT TGCTGCTCCA
    GTGTTTGTGA CAATGATATC AAAGGTGGCT TTCTATTCTC TCATGATATA TTTTGCGACA
    TCTATGGGCA CACATTCCGT GGCTGCTCAT CAGGTCATGC TTCAAATAAT GGGTATGTGC
    ACAGTAATGG GCGAGCCTCT CTCACAAACT GCACAATCAT TTATGCCTGA GTTGATATAT
    GGTGTCAATC GAAGTTTGGA AAAGGCTCGA AGGCTGCTAA AATCACTTGT CACAATTGGG
    GCTACAATGG GATTGCTTCT AGGGACCATT GGTACATTTG CTCCTTGGTT GTTCCCAAAT
    ATCTTTACAC GCGATCATCT TGCATCCATG CAGATGTACA AAGTGCTGTT ACCGTTCTTT
    ATGGCAATTG CTGTGACACC TAGCATTCAT TGCCTCGAGG GGACACTGTT GGCTGGACGG
    GATCTTAGAT TCCTTAGCTT TTCAATGACT GGATGCTTTT CTTTGGGTGC TATTGTACTG
    ATGCTTTTTA GCAGGAGAGG ATATGGTTTG CCTGGCTGTT GGTATGCACT TGTAGGATTT
    CAATGGGCCC GATTTTTCCT TTCTCTTCGG CGACTTCTTT CTCCTGATGG CATACTTTTC
    TCCGAGGACT TGAGCCGCTA TAAAATGGAG AAGCTGAAAG TTACTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024464129.1
    CDS152..1819
    Translation

    Target ORF information:

    RefSeq Version XM_024608361.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa protein DETOXIFICATION 46, chloroplastic (LOC7494456), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_024608361.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGCAAATCA AAACCCTAAT TCATTCTTCA ACAATTCCAT TTCAAAACCC TAATTTTAAA 
    AAACATCCAC AACCATCAAT TCTATTAAAA AACCCACCTA TCCATCTCCT TCAAAGTCCC
    AAAGTTCCTG CAAAATTAAA CATTTTGACA CCAAGAAATC ATCTTTATGG TTTGAAAGCC
    AATCTTAGTA GCCAAAGTCG AGAACTTTTC GATACTAACA ATGAAATTGA GGGAGAAAAT
    GACAGTAAAA CTGGCTCAAT TTTGGAAGAA GAGGAGATAA AAGTGGATAT GAATAGAGAG
    GGATTGGAGA ATCAGAGTTT ATGGAGTCAA ATAAAGGAGA TTGTTTTGTT TACAGGACCT
    GCTACAGGGC TTTGGTTATG TGGGCCATTA ATGAGTCTAA TTGATACTGT GGTTATTGGT
    CAAGGGAGTT ACATTGAACT TGCCGCTTTA GGACCTGCGA CGGTTTTATG TGATTATATG
    AGTTATGTGT TCATGTTCCT TTCAATTGCC ACTTCGAATA TGGTTGCAAC TTACCTTGCC
    AGACGGGATA AAAATCAAGT GCAGCATCAA ATATCTATCC TTCTCTTTGT CGGGATGACT
    TGTGGCTTGC TTATGCTCTT GTTTACAAGA TTATTTGGTT CATGGGCACT AACTGCTTTC
    TCAGGACCAA AAAATGCACA AATTCTACCT GCAGCAAATA CATACGTTCA GATTCGAGGC
    CTAGCATGGC CTGCAGTTCT TGTAGGATGG GTTGCTCAAA GTGCAAGTCT CGGCATGAAA
    GATTCGTGGG GGCCTCTGAA GGCTTTGGCG GTTTCTAGTG TTGTAAATGG TGTTGGTGAT
    GTAGTCCTCT GCAGCTTTTT AGGCTATGGA ATTGCTGGTG CTGCATGGGC CACAATGGTG
    TCACAGGTTA TTGCAGCTTA TATGATGATA GAAGCTTTGA ACAAAAAAGG ATACAATGCA
    TTTTCCATCT CTGTTCCAAC ACCTGACGAA ATCCTGACAG TAATTGGGCT TGCTGCTCCA
    GTGTTTGTGA CAATGATATC AAAGGTGGCT TTCTATTCTC TCATGATATA TTTTGCGACA
    TCTATGGGCA CACATTCCGT GGCTGCTCAT CAGGTCATGC TTCAAATAAT GGGTATGTGC
    ACAGTAATGG GCGAGCCTCT CTCACAAACT GCACAATCAT TTATGCCTGA GTTGATATAT
    GGTGTCAATC GAAGTTTGGA AAAGGCTCGA AGGCTGCTAA AATCACTTGT CACAATTGGG
    GCTACAATGG GATTGCTTCT AGGGACCATT GGTACATTTG CTCCTTGGTT GTTCCCAAAT
    ATCTTTACAC GCGATCATCT TGCATCCATG CAGATGTACA AAGTGCTGTT ACCGTTCTTT
    ATGGCAATTG CTGTGACACC TAGCATTCAT TGCCTCGAGG GGACACTGTT GGCTGGACGG
    GATCTTAGAT TCCTTAGCTT TTCAATGACT GGATGCTTTT CTTTGGGTGC TATTGTACTG
    ATGCTTTTTA GCAGGAGAGG ATATGGTTTG CCTGGCTGTT GGTATGCACT TGTAGGATTT
    CAATGGGCCC GATTTTTCCT TTCTCTTCGG CGACTTCTTT CTCCTGATGG CATACTTTTC
    TCCGAGGACT TGAGCCGCTA TAAAATGGAG AAGCTGAAAG TTACTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D