ORF » Species Summary » Populus trichocarpa » POPTR_0002s03610g cDNA ORF clone

POPTR_0002s03610g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0002s03610g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0002s03610g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa05981 XM_002301991.2
Latest version!		 Populus trichocarpa isoflavone reductase family protein (POPTR_0002s03610g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa424899 XM_002301991.3
Latest version!		 Populus trichocarpa mucin-5AC (LOC7479738), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0002s03610g ( XM_002301991.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002302027.2 Populus trichocarpa isoflavone reductase family protein (POPTR_0002s03610g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa05981
    Clone ID Related Accession (Same CDS sequence) XM_002301991.2
    Accession Version XM_002301991.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1659bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product isoflavone reductase family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008468). On Dec 16, 2013 this sequence version replaced XM_002301991.1. COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGCAGACC AGAGGCCATT CCGCTTTCGG CTCCCTTGGT TATCAGCACC TGTTGCTCCT 
    CCTCTACGTC CTACAGCTGA ACCCCAACCT CCTCGTCCTA GAGTTGAAAT TCAAGCACCA 
    GCACGGCCAA TCACCACCAT CCCCATTCAA CGGCCACCTT TCCGACCTGC TGGGATAACC 
    CCAGCAACGA CTCCTACTAC TCAGACTACA GCACAGGAAC AAACTGAACC TCAGCCAGTG 
    CCACCACGTC GTGCAGCCAT TGAGTCCCAA GTCAATGCCC AACCAGTATC ACAATCTCGA 
    GAAACACGGG CTGCCTCTGT GCCACCATCA CAATCTCGTG AAACTCCACA ATCAAGAGCT 
    GCATCTGTGC CCCCATCACC CTCTCGTGCG AAAACTCAAT CCCAAGCCGC CCCTCAAACC 
    CAGTCACCAT CTCGAGCAAC TCCACAATCA AGAGCTGCAT CTGTGGCTCC TTCTCCTTCT 
    CGCACCACTT CCCAGCCCCA ATCAGCAGCA GCAGTGACGG TCCCCCAAAC TCAATCCCCG 
    TCTCGTTTGG CCACTCAAGT TCCAGGTAGA AAATCTCCAC AGCTCTCTTC TCCATCTAAG 
    ACAGCTACCC AAGTGCAGCC AACAGTTTCT CAGTCCCCAT CAAAGAAATT ACAACTAGCA 
    ACACAAGAGA TCTCTCAGCC TCCTCCCAAG TCTACTCAAT CCGACACTCA ACAGGAAGAA 
    ACAAAACCAA CACCTGCAGC AGAGCCTGTA CAAGCATCAG ATGCTGTGAC AGCACCAACA 
    CCAACTCCTG AGCCAGCACT TGAGACGCCT GCATCATTAC AAAAATCAGA TTCCAGGACC 
    ATAGGTGCTG ATCATCCTAT GCCTCTTTCA CAACCAGTGA AACGAGTAAA GGAAGATATT 
    TTTGAAAGAA AGAAGACAAC GACCATTAGC CCTAATGGGG AAACTATCAA AACAGCAAGA 
    ACCCGGTCTG CCTTTGGCGA ATCTCATCAA AAAACATCCA TGTCCAGCGG AGAAAAAGTT 
    CCCCTGCAAA AAGAAATCAG GGAAGATATT TCCAAGTTCG TTCATAACCT GGGAATGGAG 
    CACATGGAGC ATCCCATAGG AGAAAAGCCT GTCAGCGTTG TTACTCTAGC AGGTGAAAAC 
    AGAGGAGCTA CCATGTATGT GGGCTCTGAA TCATCAAGAA AGGATGGGTC AGTCCACATT 
    CATCGTGGTT ATAAGATCAA TCCAGATGAG AGCAGCGAAG CTACTACTGA TGGAGAAGGA 
    AGCTCGAGGG GTAGAAGCTC CAAAGATCTG CTGACAAAAG AAGATCCGGC AAGGAAGGCA 
    TATATTAACA GTAACACACA AAGTGTCAAC AACTCGATAT TGTTTGAAAC TTCAGTAAGC 
    GAAAGAAGCC CTGGTGTACA GCTGAGTCTC TCTTATAACG ATGAAGAACC CAGCAAGAAC 
    AGCAGTAAAC CAGTGCGTCT GGAGACTCGC AAGGCTGAAT TCCAAGTCAC CCCTGCTGAG 
    AAGCTTAGTT ATGAGCCGAA GGTAAGAAGA CGATGCCTAA GAGGGCTTTT CTTGGAATCA 
    AGCGACTCCG ACCCTGATAA TCCAGAAAAG CCTCGAAGAC ATGGCTGTCG CTATAGTTGT 
    GGGCAGAAGA GAAAAGATAA GGACATAGGG GTTCTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002302027.2
    CDS1..1659
    Translation

    Target ORF information:

    RefSeq Version XM_002301991.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa isoflavone reductase family protein (POPTR_0002s03610g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002301991.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGCAGACC AGAGGCCATT CCGCTTTCGG CTCCCTTGGT TATCAGCACC TGTTGCTCCT 
    CCTCTACGTC CTACAGCTGA ACCCCAACCT CCTCGTCCTA GAGTTGAAAT TCAAGCACCA 
    GCACGGCCAA TCACCACCAT CCCCATTCAA CGGCCACCTT TCCGACCTGC TGGGATAACC 
    CCAGCAACGA CTCCTACTAC TCAGACTACA GCACAGGAAC AAACTGAACC TCAGCCAGTG 
    CCACCACGTC GTGCAGCCAT TGAGTCCCAA GTCAATGCCC AACCAGTATC ACAATCTCGA 
    GAAACACGGG CTGCCTCTGT GCCACCATCA CAATCTCGTG AAACTCCACA ATCAAGAGCT 
    GCATCTGTGC CCCCATCACC CTCTCGTGCG AAAACTCAAT CCCAAGCCGC CCCTCAAACC 
    CAGTCACCAT CTCGAGCAAC TCCACAATCA AGAGCTGCAT CTGTGGCTCC TTCTCCTTCT 
    CGCACCACTT CCCAGCCCCA ATCAGCAGCA GCAGTGACGG TCCCCCAAAC TCAATCCCCG 
    TCTCGTTTGG CCACTCAAGT TCCAGGTAGA AAATCTCCAC AGCTCTCTTC TCCATCTAAG 
    ACAGCTACCC AAGTGCAGCC AACAGTTTCT CAGTCCCCAT CAAAGAAATT ACAACTAGCA 
    ACACAAGAGA TCTCTCAGCC TCCTCCCAAG TCTACTCAAT CCGACACTCA ACAGGAAGAA 
    ACAAAACCAA CACCTGCAGC AGAGCCTGTA CAAGCATCAG ATGCTGTGAC AGCACCAACA 
    CCAACTCCTG AGCCAGCACT TGAGACGCCT GCATCATTAC AAAAATCAGA TTCCAGGACC 
    ATAGGTGCTG ATCATCCTAT GCCTCTTTCA CAACCAGTGA AACGAGTAAA GGAAGATATT 
    TTTGAAAGAA AGAAGACAAC GACCATTAGC CCTAATGGGG AAACTATCAA AACAGCAAGA 
    ACCCGGTCTG CCTTTGGCGA ATCTCATCAA AAAACATCCA TGTCCAGCGG AGAAAAAGTT 
    CCCCTGCAAA AAGAAATCAG GGAAGATATT TCCAAGTTCG TTCATAACCT GGGAATGGAG 
    CACATGGAGC ATCCCATAGG AGAAAAGCCT GTCAGCGTTG TTACTCTAGC AGGTGAAAAC 
    AGAGGAGCTA CCATGTATGT GGGCTCTGAA TCATCAAGAA AGGATGGGTC AGTCCACATT 
    CATCGTGGTT ATAAGATCAA TCCAGATGAG AGCAGCGAAG CTACTACTGA TGGAGAAGGA 
    AGCTCGAGGG GTAGAAGCTC CAAAGATCTG CTGACAAAAG AAGATCCGGC AAGGAAGGCA 
    TATATTAACA GTAACACACA AAGTGTCAAC AACTCGATAT TGTTTGAAAC TTCAGTAAGC 
    GAAAGAAGCC CTGGTGTACA GCTGAGTCTC TCTTATAACG ATGAAGAACC CAGCAAGAAC 
    AGCAGTAAAC CAGTGCGTCT GGAGACTCGC AAGGCTGAAT TCCAAGTCAC CCCTGCTGAG 
    AAGCTTAGTT ATGAGCCGAA GGTAAGAAGA CGATGCCTAA GAGGGCTTTT CTTGGAATCA 
    AGCGACTCCG ACCCTGATAA TCCAGAAAAG CCTCGAAGAC ATGGCTGTCG CTATAGTTGT 
    GGGCAGAAGA GAAAAGATAA GGACATAGGG GTTCTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0002s03610g ( XM_002301991.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002302027.3 Populus trichocarpa mucin-5AC (LOC7479738), mRNA.
    Price & Availability↑
    CloneID OPa424899
    Clone ID Related Accession (Same CDS sequence) XM_002301991.3
    Accession Version XM_002301991.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1659bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product mucin-5AC
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002301991.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGCAGACC AGAGGCCATT CCGCTTTCGG CTCCCTTGGT TATCAGCACC TGTTGCTCCT 
    CCTCTACGTC CTACAGCTGA ACCCCAACCT CCTCGTCCTA GAGTTGAAAT TCAAGCACCA 
    GCACGGCCAA TCACCACCAT CCCCATTCAA CGGCCACCTT TCCGACCTGC TGGGATAACC 
    CCAGCAACGA CTCCTACTAC TCAGACTACA GCACAGGAAC AAACTGAACC TCAGCCAGTG 
    CCACCACGTC GTGCAGCCAT TGAGTCCCAA GTCAATGCCC AACCAGTATC ACAATCTCGA 
    GAAACACGGG CTGCCTCTGT GCCACCATCA CAATCTCGTG AAACTCCACA ATCAAGAGCT 
    GCATCTGTGC CCCCATCACC CTCTCGTGCG AAAACTCAAT CCCAAGCCGC CCCTCAAACC 
    CAGTCACCAT CTCGAGCAAC TCCACAATCA AGAGCTGCAT CTGTGGCTCC TTCTCCTTCT 
    CGCACCACTT CCCAGCCCCA ATCAGCAGCA GCAGTGACGG TCCCCCAAAC TCAATCCCCG 
    TCTCGTTTGG CCACTCAAGT TCCAGGTAGA AAATCTCCAC AGCTCTCTTC TCCATCTAAG 
    ACAGCTACCC AAGTGCAGCC AACAGTTTCT CAGTCCCCAT CAAAGAAATT ACAACTAGCA 
    ACACAAGAGA TCTCTCAGCC TCCTCCCAAG TCTACTCAAT CCGACACTCA ACAGGAAGAA 
    ACAAAACCAA CACCTGCAGC AGAGCCTGTA CAAGCATCAG ATGCTGTGAC AGCACCAACA 
    CCAACTCCTG AGCCAGCACT TGAGACGCCT GCATCATTAC AAAAATCAGA TTCCAGGACC 
    ATAGGTGCTG ATCATCCTAT GCCTCTTTCA CAACCAGTGA AACGAGTAAA GGAAGATATT 
    TTTGAAAGAA AGAAGACAAC GACCATTAGC CCTAATGGGG AAACTATCAA AACAGCAAGA 
    ACCCGGTCTG CCTTTGGCGA ATCTCATCAA AAAACATCCA TGTCCAGCGG AGAAAAAGTT 
    CCCCTGCAAA AAGAAATCAG GGAAGATATT TCCAAGTTCG TTCATAACCT GGGAATGGAG 
    CACATGGAGC ATCCCATAGG AGAAAAGCCT GTCAGCGTTG TTACTCTAGC AGGTGAAAAC 
    AGAGGAGCTA CCATGTATGT GGGCTCTGAA TCATCAAGAA AGGATGGGTC AGTCCACATT 
    CATCGTGGTT ATAAGATCAA TCCAGATGAG AGCAGCGAAG CTACTACTGA TGGAGAAGGA 
    AGCTCGAGGG GTAGAAGCTC CAAAGATCTG CTGACAAAAG AAGATCCGGC AAGGAAGGCA 
    TATATTAACA GTAACACACA AAGTGTCAAC AACTCGATAT TGTTTGAAAC TTCAGTAAGC 
    GAAAGAAGCC CTGGTGTACA GCTGAGTCTC TCTTATAACC ATGAAGAACC CAGCAAGAAC 
    AGCAGTAAAC CAGTGCGTCT GGAGACTCGC AAGGCTGAAT TCCAAGTCAC CCCTGCTGAG 
    AAGCTTAGTT ATGAGCCGAA GGTAAGAAGA CGATGCCTAA GAGGGCTTTT CTTGGAATCA 
    AGCGACTCCG ACCCTGATAA TCCAGAAAAG CCTCGAAGAC ATGGCTGTCG CTATAGTTGT 
    GGGCAGAAGA GAAAAGATAA GGACATAGGG GTTCTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002302027.3
    CDS358..2016
    Translation

    Target ORF information:

    RefSeq Version XM_002301991.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa mucin-5AC (LOC7479738), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002301991.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGCAGACC AGAGGCCATT CCGCTTTCGG CTCCCTTGGT TATCAGCACC TGTTGCTCCT 
    CCTCTACGTC CTACAGCTGA ACCCCAACCT CCTCGTCCTA GAGTTGAAAT TCAAGCACCA 
    GCACGGCCAA TCACCACCAT CCCCATTCAA CGGCCACCTT TCCGACCTGC TGGGATAACC 
    CCAGCAACGA CTCCTACTAC TCAGACTACA GCACAGGAAC AAACTGAACC TCAGCCAGTG 
    CCACCACGTC GTGCAGCCAT TGAGTCCCAA GTCAATGCCC AACCAGTATC ACAATCTCGA 
    GAAACACGGG CTGCCTCTGT GCCACCATCA CAATCTCGTG AAACTCCACA ATCAAGAGCT 
    GCATCTGTGC CCCCATCACC CTCTCGTGCG AAAACTCAAT CCCAAGCCGC CCCTCAAACC 
    CAGTCACCAT CTCGAGCAAC TCCACAATCA AGAGCTGCAT CTGTGGCTCC TTCTCCTTCT 
    CGCACCACTT CCCAGCCCCA ATCAGCAGCA GCAGTGACGG TCCCCCAAAC TCAATCCCCG 
    TCTCGTTTGG CCACTCAAGT TCCAGGTAGA AAATCTCCAC AGCTCTCTTC TCCATCTAAG 
    ACAGCTACCC AAGTGCAGCC AACAGTTTCT CAGTCCCCAT CAAAGAAATT ACAACTAGCA 
    ACACAAGAGA TCTCTCAGCC TCCTCCCAAG TCTACTCAAT CCGACACTCA ACAGGAAGAA 
    ACAAAACCAA CACCTGCAGC AGAGCCTGTA CAAGCATCAG ATGCTGTGAC AGCACCAACA 
    CCAACTCCTG AGCCAGCACT TGAGACGCCT GCATCATTAC AAAAATCAGA TTCCAGGACC 
    ATAGGTGCTG ATCATCCTAT GCCTCTTTCA CAACCAGTGA AACGAGTAAA GGAAGATATT 
    TTTGAAAGAA AGAAGACAAC GACCATTAGC CCTAATGGGG AAACTATCAA AACAGCAAGA 
    ACCCGGTCTG CCTTTGGCGA ATCTCATCAA AAAACATCCA TGTCCAGCGG AGAAAAAGTT 
    CCCCTGCAAA AAGAAATCAG GGAAGATATT TCCAAGTTCG TTCATAACCT GGGAATGGAG 
    CACATGGAGC ATCCCATAGG AGAAAAGCCT GTCAGCGTTG TTACTCTAGC AGGTGAAAAC 
    AGAGGAGCTA CCATGTATGT GGGCTCTGAA TCATCAAGAA AGGATGGGTC AGTCCACATT 
    CATCGTGGTT ATAAGATCAA TCCAGATGAG AGCAGCGAAG CTACTACTGA TGGAGAAGGA 
    AGCTCGAGGG GTAGAAGCTC CAAAGATCTG CTGACAAAAG AAGATCCGGC AAGGAAGGCA 
    TATATTAACA GTAACACACA AAGTGTCAAC AACTCGATAT TGTTTGAAAC TTCAGTAAGC 
    GAAAGAAGCC CTGGTGTACA GCTGAGTCTC TCTTATAACC ATGAAGAACC CAGCAAGAAC 
    AGCAGTAAAC CAGTGCGTCT GGAGACTCGC AAGGCTGAAT TCCAAGTCAC CCCTGCTGAG 
    AAGCTTAGTT ATGAGCCGAA GGTAAGAAGA CGATGCCTAA GAGGGCTTTT CTTGGAATCA 
    AGCGACTCCG ACCCTGATAA TCCAGAAAAG CCTCGAAGAC ATGGCTGTCG CTATAGTTGT 
    GGGCAGAAGA GAAAAGATAA GGACATAGGG GTTCTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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