ORF » Species Summary » Populus trichocarpa » LOC7468560 cDNA ORF clone

LOC7468560 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7468560 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7468560 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa21009 XM_002314066.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0009s05090g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
OPa436397 XM_002314066.3
Latest version!		 Populus trichocarpa SMR domain-containing protein At5g58720 (LOC7468560), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7468560 ( XM_002314066.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002314102.2 Populus trichocarpa hypothetical protein (POPTR_0009s05090g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa21009
    Clone ID Related Accession (Same CDS sequence) XM_002314066.2
    Accession Version XM_002314066.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1581bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008475). On Dec 16, 2013 this sequence version replaced XM_002314066.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGATGCAAC AACACAATAA GAAGAAGAAG AAGCGATCCG CTTCACGTGC CTCTAAACCC 
    ATCTCACTTG ACGGAGGTCA GGGTCAACAA TCGCAACGGC AACAAAATCC GGAGCAGAGA 
    CAGGAAGGAA CCAAAGTAGT TGAGGCTTTA ATGGAAGCAT TTGACTCGAT CTCTGTAGAA 
    GAAGCCGAAG AGGCTTATAG GGAAGCGAAG GGAGATATTA ACAAAGCGGC GCAGATTTTG 
    GAGAATTTCA TGGAAAATAG TGAGGATCCA TCGACAAGTT CCTTTTCGAG TGGGTTATCG 
    GGTTTTGGTT TGGGTTCGAG CTCGAGTAGT AGTGCGGGTT CGAGTTCGGC TTCAAGGGAT 
    GGGTTTTTGG AGGGGAATTT GGTGAATAGG AAAGGGTTTC GAGGAGGGAA CAAGCAGAAG 
    AGAGTTTTGG CGGTTACGGG GACGGTCTCG ACGGTTTTAG GGAAGGAGTA TGTTAAGGCC 
    AGCCCGAGAA GGGATTCTAT GAAAGCAAAG GACTTTGGGA ATGGTGTTGT GGAGAAAGAA 
    GAGGCGGAAC AGTTTTTGTG TTCGATGCTT GGTAATGATT GTGAGCTCAG CATGGGTGTT 
    GTTAGAGATG TTCTTTGTCA GTGCGGATAT GATGTTGAAA AGGCGTTGGA TGTGTTGCTT 
    GATTTATCAG CTTCCTCCCA TGAACAGTCA AGAAGTGGTA GACATGTTAA AGATTCTGTA 
    AACTATAAAG AAGATGCCAG ATTTCTTGCT GAGCGCAGTG ACAATTCGAC TGATGTGGCT 
    TCTGATTGCA CTTCCCATTC TTCTGAAAGT GAACTTCAGG ATAGTGTTTG GGGCTGTGGT 
    TACAGGAACT ATTATCAGGC CCTTACTAGT TTCGAAGCTC CATCTTCAAC TACCCCAATA 
    AGCAATGAGT CAAATCTCCC TCAAAAGGTT TTGGAATGTT TGTTCAATGT TCCCATGAGT 
    TCTGAACATG AACCAAGCAC TATGAATTGG AGGAATGTAG TAAAGAAAAT GCAATCACTG 
    GGGCCTGCTG TTGATGTCTT TCCATCTATT GATGCACTTC CTCAGCAGAA TAACTATGCC 
    AATGGTGAAG AATATCATCT TCTTAGAGAA TCTGCAAAGC GACACTGGAA TTCAAGGACC 
    TCATACTATC AAAAAGCTGC AGCAGCATAT TCAAAGGGAG AGAGGGGGTA TGCAGCTTAC 
    CTTTCAGATC AGGGGAGGAT ACAAACTAAG TTGGCGCAGG AGGCAGATAA AAAGGCAAGC 
    CAGGATATCT TTAAAGCTAG AAACAAGGGC ATAACAAATG TCATAACAAT TGATTTGCAT 
    GGGCAACATG TCAAACAAGC AATGAGGGTT TTGAAACTTC ATCTTCTATT TGGAACTTAT 
    GTGCGCTCAA TTCAAACTCT CAGAGTAATC ACAGGATGTG GGAGTCGTGG TCTGGGAAAG 
    TCAAAAGTCA AACAAGCGGT CACAAGACTC CTGGAGAATG AAGGTATTGA ATGGAGTGAA 
    GAAAACCAAG GAGTGTTGTT AATCAAGATT GATGGATACA AAGAGTATAG CTTTCCAGAT 
    ATAGATAGCG ATACTGACTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002314102.2
    CDS237..1817
    Translation

    Target ORF information:

    RefSeq Version XM_002314066.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0009s05090g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002314066.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGATGCAAC AACACAATAA GAAGAAGAAG AAGCGATCCG CTTCACGTGC CTCTAAACCC 
    ATCTCACTTG ACGGAGGTCA GGGTCAACAA TCGCAACGGC AACAAAATCC GGAGCAGAGA 
    CAGGAAGGAA CCAAAGTAGT TGAGGCTTTA ATGGAAGCAT TTGACTCGAT CTCTGTAGAA 
    GAAGCCGAAG AGGCTTATAG GGAAGCGAAG GGAGATATTA ACAAAGCGGC GCAGATTTTG 
    GAGAATTTCA TGGAAAATAG TGAGGATCCA TCGACAAGTT CCTTTTCGAG TGGGTTATCG 
    GGTTTTGGTT TGGGTTCGAG CTCGAGTAGT AGTGCGGGTT CGAGTTCGGC TTCAAGGGAT 
    GGGTTTTTGG AGGGGAATTT GGTGAATAGG AAAGGGTTTC GAGGAGGGAA CAAGCAGAAG 
    AGAGTTTTGG CGGTTACGGG GACGGTCTCG ACGGTTTTAG GGAAGGAGTA TGTTAAGGCC 
    AGCCCGAGAA GGGATTCTAT GAAAGCAAAG GACTTTGGGA ATGGTGTTGT GGAGAAAGAA 
    GAGGCGGAAC AGTTTTTGTG TTCGATGCTT GGTAATGATT GTGAGCTCAG CATGGGTGTT 
    GTTAGAGATG TTCTTTGTCA GTGCGGATAT GATGTTGAAA AGGCGTTGGA TGTGTTGCTT 
    GATTTATCAG CTTCCTCCCA TGAACAGTCA AGAAGTGGTA GACATGTTAA AGATTCTGTA 
    AACTATAAAG AAGATGCCAG ATTTCTTGCT GAGCGCAGTG ACAATTCGAC TGATGTGGCT 
    TCTGATTGCA CTTCCCATTC TTCTGAAAGT GAACTTCAGG ATAGTGTTTG GGGCTGTGGT 
    TACAGGAACT ATTATCAGGC CCTTACTAGT TTCGAAGCTC CATCTTCAAC TACCCCAATA 
    AGCAATGAGT CAAATCTCCC TCAAAAGGTT TTGGAATGTT TGTTCAATGT TCCCATGAGT 
    TCTGAACATG AACCAAGCAC TATGAATTGG AGGAATGTAG TAAAGAAAAT GCAATCACTG 
    GGGCCTGCTG TTGATGTCTT TCCATCTATT GATGCACTTC CTCAGCAGAA TAACTATGCC 
    AATGGTGAAG AATATCATCT TCTTAGAGAA TCTGCAAAGC GACACTGGAA TTCAAGGACC 
    TCATACTATC AAAAAGCTGC AGCAGCATAT TCAAAGGGAG AGAGGGGGTA TGCAGCTTAC 
    CTTTCAGATC AGGGGAGGAT ACAAACTAAG TTGGCGCAGG AGGCAGATAA AAAGGCAAGC 
    CAGGATATCT TTAAAGCTAG AAACAAGGGC ATAACAAATG TCATAACAAT TGATTTGCAT 
    GGGCAACATG TCAAACAAGC AATGAGGGTT TTGAAACTTC ATCTTCTATT TGGAACTTAT 
    GTGCGCTCAA TTCAAACTCT CAGAGTAATC ACAGGATGTG GGAGTCGTGG TCTGGGAAAG 
    TCAAAAGTCA AACAAGCGGT CACAAGACTC CTGGAGAATG AAGGTATTGA ATGGAGTGAA 
    GAAAACCAAG GAGTGTTGTT AATCAAGATT GATGGATACA AAGAGTATAG CTTTCCAGAT 
    ATAGATAGCG ATACTGACTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7468560 ( XM_002314066.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002314102.3 Populus trichocarpa SMR domain-containing protein At5g58720 (LOC7468560), mRNA.
    Price & Availability↑
    CloneID OPa436397
    Clone ID Related Accession (Same CDS sequence) XM_002314066.3
    Accession Version XM_002314066.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1578bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product SMR domain-containing protein At5g58720
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037293.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002314066.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGATGCAAC AACACAATAA GAAGAAGAAG AAGCGATCCG CTTCACGTGC CTCTAAACCC 
    ATCTCACTTG ACGGAGGTCA GGGTCAACAA TCGCAACGGC AACAAAATCC GGAGCAGAGA 
    CAGGAAGGAA CCAAAGTAGT TGAGGCTTTA ATGGAAGCTT TTGACTCGAT CTCTGTAGAA 
    GAAGCCGAAG AGGCTTATAG GGAAGCGAAG GGAGATATTA ACAAAGCGGC GCAGATTTTG 
    GAGAATTTCA TGGAAAATAG TGAGGATCCA TCGACAAGTT CCTTTTCGAG TGGGTTATCG 
    GGTTTTGGTT TGGGTTCGAG CTCGAGTAGT AGTGCGGGTT CGAGTTCGGC TTCAAGGGAT 
    GGGTTTTTGG AGGGGAATTT GGTGAATAGG AAAGGGTTTC GAGGAGGGAA CAAGCAGAAG 
    AGAGTTTTGG CGGTTACGGG GACGGTCTCG ACGGTTTTAG GGAAGGAGTA TGTTAAGGCC 
    AGCCCGAGAA GGGATTCTAT GAAAGCAAAG GACTTTGGGA ATGGTGTTGT GGAGAAAGAA 
    GAGGCGGAAC AGTTTTTGTG TTCGATGCTT GGTAATGATT GTGAGCTCAG CATGGGTGTT 
    GTTAGAGATG TTCTTTGTCA GTGCGGATAT GATGTTGAAA AGGCGTTGGA TGTGTTGCTT 
    GATTTATCAG CTTCCTCCCA TGAACAGTCA AGTGGTAGAC ATGTTAAAGA TTCTGTAAAC 
    TATAAAGAAG ATGCCAGATT TCTTGCTGAG CGCAGTGACA ATTCGACTGA TGTGGCTTCT 
    GATTGCACTT CCCATTCTTC TGAAAGTGAA CTTCAGGATA GTGTTTGGGG CTGTGGTTAC 
    AGGAACTATT ATCAGGCCCT TACTAGTTTC GAAGCTCCAT CTTCAACTAC CCCAATAAGC 
    AATGAGTCAA ATCTCCCTCA AAAGGTTTTG GAATGTTTGT TCAATGTTCC CATGAGTTCT 
    GAACATGAAC CAAGCACTAT GAATTGGAGG AATGTAGTAA AGAAAATGCA ATCACTGGGG 
    CCTGCTGTTG ATGTCTTTCC ATCTATTGAT GCACTTCCTC AGCAGAATAA CTATGCCAAT 
    GGTGAAGAAT ATCATCTTCT TAGAGAATCT GCAAAGCGAC ACTGGAATTC AAGGACCTCA 
    TACTATCAAA AAGCTGCAGC AGCATATTCA AAGGGAGAGA GGGGGTATGC AGCTTACCTT 
    TCAGATCAGG GGAGGATACA AACTAAGTTG GCGCAGGAGG CAGATAAAAA GGCAAGCCAG 
    GATATCTTTA AAGCTAGAAA CAAGGGCATA ACAAATGTCA TAACAATTGA TTTGCATGGG 
    CAACATGTCA AACAAGCAAT GAGGGTTTTG AAACTTCATC TTCTATTTGG AACTTATGTG 
    CGCTCAATTC AAACTCTCAG AGTAATCACA GGATGTGGGA GTCGTGGTCT GGGAAAGTCA 
    AAAGTCAAAC AAGCGGTCAC AAGACTCCTG GAGAATGAAG GTATTGAATG GAGTGAAGAA 
    AACCAAGGAG TGTTGTTAAT CAAGATTGAT GGATACAAAG AGTATAGCTT TCCAGATATA 
    GATAGCGATA CCGACTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002314102.3
    CDS254..1831
    Translation

    Target ORF information:

    RefSeq Version XM_002314066.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa SMR domain-containing protein At5g58720 (LOC7468560), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002314066.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGATGCAAC AACACAATAA GAAGAAGAAG AAGCGATCCG CTTCACGTGC CTCTAAACCC 
    ATCTCACTTG ACGGAGGTCA GGGTCAACAA TCGCAACGGC AACAAAATCC GGAGCAGAGA 
    CAGGAAGGAA CCAAAGTAGT TGAGGCTTTA ATGGAAGCTT TTGACTCGAT CTCTGTAGAA 
    GAAGCCGAAG AGGCTTATAG GGAAGCGAAG GGAGATATTA ACAAAGCGGC GCAGATTTTG 
    GAGAATTTCA TGGAAAATAG TGAGGATCCA TCGACAAGTT CCTTTTCGAG TGGGTTATCG 
    GGTTTTGGTT TGGGTTCGAG CTCGAGTAGT AGTGCGGGTT CGAGTTCGGC TTCAAGGGAT 
    GGGTTTTTGG AGGGGAATTT GGTGAATAGG AAAGGGTTTC GAGGAGGGAA CAAGCAGAAG 
    AGAGTTTTGG CGGTTACGGG GACGGTCTCG ACGGTTTTAG GGAAGGAGTA TGTTAAGGCC 
    AGCCCGAGAA GGGATTCTAT GAAAGCAAAG GACTTTGGGA ATGGTGTTGT GGAGAAAGAA 
    GAGGCGGAAC AGTTTTTGTG TTCGATGCTT GGTAATGATT GTGAGCTCAG CATGGGTGTT 
    GTTAGAGATG TTCTTTGTCA GTGCGGATAT GATGTTGAAA AGGCGTTGGA TGTGTTGCTT 
    GATTTATCAG CTTCCTCCCA TGAACAGTCA AGTGGTAGAC ATGTTAAAGA TTCTGTAAAC 
    TATAAAGAAG ATGCCAGATT TCTTGCTGAG CGCAGTGACA ATTCGACTGA TGTGGCTTCT 
    GATTGCACTT CCCATTCTTC TGAAAGTGAA CTTCAGGATA GTGTTTGGGG CTGTGGTTAC 
    AGGAACTATT ATCAGGCCCT TACTAGTTTC GAAGCTCCAT CTTCAACTAC CCCAATAAGC 
    AATGAGTCAA ATCTCCCTCA AAAGGTTTTG GAATGTTTGT TCAATGTTCC CATGAGTTCT 
    GAACATGAAC CAAGCACTAT GAATTGGAGG AATGTAGTAA AGAAAATGCA ATCACTGGGG 
    CCTGCTGTTG ATGTCTTTCC ATCTATTGAT GCACTTCCTC AGCAGAATAA CTATGCCAAT 
    GGTGAAGAAT ATCATCTTCT TAGAGAATCT GCAAAGCGAC ACTGGAATTC AAGGACCTCA 
    TACTATCAAA AAGCTGCAGC AGCATATTCA AAGGGAGAGA GGGGGTATGC AGCTTACCTT 
    TCAGATCAGG GGAGGATACA AACTAAGTTG GCGCAGGAGG CAGATAAAAA GGCAAGCCAG 
    GATATCTTTA AAGCTAGAAA CAAGGGCATA ACAAATGTCA TAACAATTGA TTTGCATGGG 
    CAACATGTCA AACAAGCAAT GAGGGTTTTG AAACTTCATC TTCTATTTGG AACTTATGTG 
    CGCTCAATTC AAACTCTCAG AGTAATCACA GGATGTGGGA GTCGTGGTCT GGGAAAGTCA 
    AAAGTCAAAC AAGCGGTCAC AAGACTCCTG GAGAATGAAG GTATTGAATG GAGTGAAGAA 
    AACCAAGGAG TGTTGTTAAT CAAGATTGAT GGATACAAAG AGTATAGCTT TCCAGATATA 
    GATAGCGATA CCGACTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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