POPTR_0008s07940g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0008s07940g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0008s07940g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa18644 XM_002311239.2
Latest version!
Populus trichocarpa hypothetical protein (POPTR_0008s07940g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
OPa434285 XM_024606309.1
Latest version!
Populus trichocarpa protease Do-like 10, mitochondrial (LOC7462128), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OPa18644
    Clone ID Related Accession (Same CDS sequence) XM_002311239.2
    Accession Version XM_002311239.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1764bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008474). On Dec 16, 2013 this sequence version replaced XM_002311239.1. COMPLETENESS: incomplete on the 5' end.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGTTGTCTT CATCAGGTCG TGCAGTGAGG AAGCTATGCT CCTCTTCTTC TTGCACCGCC 
    GCCTCTGTTA TCAGAAACCG TAACTTGTTG CTCAGAGAAA GATACATTTC CCCTCTTGTA
    TCATCAAATT TAGCAAAATA TTCGAAAACA ACACAACACA GAGCCATTCC TTCCCTTTTC
    AATAACTTTT CATTATATTC TACAACAGCA GAAGCATCAA CCGCAGCAAT AACATCAGCC
    TCAGCAGCAA CAGCTAACAA TCATTTGGAG GAGGCATCAC AACCAAACCT GAGTGATGCA
    TATTCTGCTA TAGAGCTTGC ATTAGATTCA GTTGTCAAGA TTTTTACTGT TTCAAGTAGC
    CCCAATTACT TCCTTCCATG GCAAAACAAG TCACAGCGTG AAACCATGGG TTCTGGATTT
    GTTATTACTG GAAAAAAAAT TCTTACAAAT GCTCATGTGG TGGCTGATCA TACATTTGTA
    CTCGTAAGAA AGCACGGGTC TCCCACCAAA TACAGAGCTG AAGTTCAAGC TGTTGGTCAT
    GAATGTGATT TAGCTATTCT AGTTGTTGAA AATGAAGAAT TCTGGAAGGG TATGAATTTC
    TTGGAGCTAG GAGACATCCC ATTTCTGCAG GAAGCTGTTG CAGTAGTCGG GTATCCTCAA
    GGTGGGGACA ACATATCTGT TACCAAAGGT GTTGTCTCCA GAGTTGAACC AACACAATAT
    GTACATGGAG CATCCCAGTT AATGGCAATA CAGATTGATG CTGCCATAAA TCCTGGGAAT
    AGCGGTGGTC CAGCAATAAT GGGAAATAAA GTTGCCGGTG TGGCTTTCCA GAACCTATCA
    GGTGCTGAAA ATATTGGCTA TATAATTCCT GTTCCTGTAA TCAAGCATTT TATAAATGGT
    GTGGAAGAAA GTGGAAAATA TGTTGGATTC TGCTCTATGG GCCTATCATG CCAACCAACT
    GAAAATGTTC AACTGAGAAA GCACTTTGGT ATGCGCCCTG AAATGACAGG TGTGCTTGTG
    AGCAAAATTA ATCCACTGTC AGATGCACAC AGAGTCCTAA AAACAGATGA TATTATCCTT
    GCCTTTGATG GAGTGCCTAT AGCAAACGAT GGAACAGTGC CTTTCCGAAA CAGAGAGCGG
    ATAACTTTTG ATCACTTAGT GTCTATGAAG AAACCCAATG AAACAGCTTC AGTTAGACTT
    TTGAGGGGTG GTGAAGAGCA TGAATTCAGT ATCACCCTTA GACCTTTGCA GCCCCTAGTT
    CCTGTTCATC AATTTGATAA GCTTCCTAGT TATTACATTT TTGCTGGTCT GGTCTTTGTT
    CCACTAACAC AACCATATCT TCATGAGTAT GGAGAAGAAT GGTATAATAC ATCACCTCGT
    CGATTATGTG AACGTGCATT GAAAGAGCTG CCAAAAAAGG CTGACCAACA ACTTATCATT
    CTTTCTCAGG CATGCTTGCG CTTTTTCTTT GTGCTCATGG ACGATATAAA TGCTGGGTAT
    GAGCGTCTTG CAGAACTACA GGTTAAGAAA GTCAATGGAG TAGAAATCGA CAATTTGAAG
    CACCTGTGCC AACTTATCAG GGACTGTAGT TCAGAGAGCT TGAGGTTTGA TTTAGATGAT
    GATAGGGTAA TTGCGTTGAA TTATCAGTCT GCAAAAGTAG CTACTTCCAG AATTTTGAAA
    CGTCACAGGA TACCTTCCGC CATGTCCAGC GACCTTAGTG CTGAACAAAA TATACCAGAA
    AGTGAGTCGG CCAGCTCAAG CTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002311275.1
    CDS1..1764
    Translation

    Target ORF information:

    RefSeq Version XM_002311239.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0008s07940g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002311239.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGTTGTCTT CATCAGGTCG TGCAGTGAGG AAGCTATGCT CCTCTTCTTC TTGCACCGCC 
    GCCTCTGTTA TCAGAAACCG TAACTTGTTG CTCAGAGAAA GATACATTTC CCCTCTTGTA
    TCATCAAATT TAGCAAAATA TTCGAAAACA ACACAACACA GAGCCATTCC TTCCCTTTTC
    AATAACTTTT CATTATATTC TACAACAGCA GAAGCATCAA CCGCAGCAAT AACATCAGCC
    TCAGCAGCAA CAGCTAACAA TCATTTGGAG GAGGCATCAC AACCAAACCT GAGTGATGCA
    TATTCTGCTA TAGAGCTTGC ATTAGATTCA GTTGTCAAGA TTTTTACTGT TTCAAGTAGC
    CCCAATTACT TCCTTCCATG GCAAAACAAG TCACAGCGTG AAACCATGGG TTCTGGATTT
    GTTATTACTG GAAAAAAAAT TCTTACAAAT GCTCATGTGG TGGCTGATCA TACATTTGTA
    CTCGTAAGAA AGCACGGGTC TCCCACCAAA TACAGAGCTG AAGTTCAAGC TGTTGGTCAT
    GAATGTGATT TAGCTATTCT AGTTGTTGAA AATGAAGAAT TCTGGAAGGG TATGAATTTC
    TTGGAGCTAG GAGACATCCC ATTTCTGCAG GAAGCTGTTG CAGTAGTCGG GTATCCTCAA
    GGTGGGGACA ACATATCTGT TACCAAAGGT GTTGTCTCCA GAGTTGAACC AACACAATAT
    GTACATGGAG CATCCCAGTT AATGGCAATA CAGATTGATG CTGCCATAAA TCCTGGGAAT
    AGCGGTGGTC CAGCAATAAT GGGAAATAAA GTTGCCGGTG TGGCTTTCCA GAACCTATCA
    GGTGCTGAAA ATATTGGCTA TATAATTCCT GTTCCTGTAA TCAAGCATTT TATAAATGGT
    GTGGAAGAAA GTGGAAAATA TGTTGGATTC TGCTCTATGG GCCTATCATG CCAACCAACT
    GAAAATGTTC AACTGAGAAA GCACTTTGGT ATGCGCCCTG AAATGACAGG TGTGCTTGTG
    AGCAAAATTA ATCCACTGTC AGATGCACAC AGAGTCCTAA AAACAGATGA TATTATCCTT
    GCCTTTGATG GAGTGCCTAT AGCAAACGAT GGAACAGTGC CTTTCCGAAA CAGAGAGCGG
    ATAACTTTTG ATCACTTAGT GTCTATGAAG AAACCCAATG AAACAGCTTC AGTTAGACTT
    TTGAGGGGTG GTGAAGAGCA TGAATTCAGT ATCACCCTTA GACCTTTGCA GCCCCTAGTT
    CCTGTTCATC AATTTGATAA GCTTCCTAGT TATTACATTT TTGCTGGTCT GGTCTTTGTT
    CCACTAACAC AACCATATCT TCATGAGTAT GGAGAAGAAT GGTATAATAC ATCACCTCGT
    CGATTATGTG AACGTGCATT GAAAGAGCTG CCAAAAAAGG CTGACCAACA ACTTATCATT
    CTTTCTCAGG CATGCTTGCG CTTTTTCTTT GTGCTCATGG ACGATATAAA TGCTGGGTAT
    GAGCGTCTTG CAGAACTACA GGTTAAGAAA GTCAATGGAG TAGAAATCGA CAATTTGAAG
    CACCTGTGCC AACTTATCAG GGACTGTAGT TCAGAGAGCT TGAGGTTTGA TTTAGATGAT
    GATAGGGTAA TTGCGTTGAA TTATCAGTCT GCAAAAGTAG CTACTTCCAG AATTTTGAAA
    CGTCACAGGA TACCTTCCGC CATGTCCAGC GACCTTAGTG CTGAACAAAA TATACCAGAA
    AGTGAGTCGG CCAGCTCAAG CTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa434285
    Clone ID Related Accession (Same CDS sequence) XM_024606309.1
    Accession Version XM_024606309.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1743bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product protease Do-like 10, mitochondrial
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037292.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGTTGTCTT CATCAGGTCG TGCAGTGAGG AAGCTATGCT CCTCTTCTTC TTGCACCGCC 
    GCCTCTGTTA TCAGAAACCG TAACTTGTTG CTCAGAGAAA GATACATTTC CCCTCTTGTA
    TCATCAAATT TAGCAAAATA TTCGAAAACA ACACAACACA GAGCCATTCC TTCCCTTTTC
    AATAACTTTT CATTATATTC TACAACAGCA GAAGCATCAA CCGCAGCAAT AACATCAGCC
    TCAGCAGCAA CAGCTAACAA TCATTTGGAG GAGGCATCAC AACCAAACCT GAGTGATGCA
    TATTCTGCTA TAGAGCTTGC ATTAGATTCA GTTGTCAAGA TTTTTACTGT TTCAAGTAGC
    CCCAATTACT TCCTTCCATG GCAAAACAAG TCACAGCGTG AAACCATGGG TTCTGGATTT
    GTTATTACTG GAAAAAAAAT TCTTACAAAT GCTCATGTGG TGGCTGATCA TACATTTGTA
    CTCGTAAGAA AGCACGGGTC TCCCACCAAA TACAGAGCTG AAGTTCAAGC TGTTGGTCAT
    GAATGTGATT TAGCTATTCT AGTTGTTGAA AATGAAGAAT TCTGGAAGGG TATGAATTTC
    TTGGAGCTAG GAGACATCCC ATTTCTGCAG GAAGCTGTTG CAGTAGTCGG GTATCCTCAA
    GGTGGGGACA ACATATCTGT TACCAAAGGT GTTGTCTCCA GAGTTGAACC AACACAATAT
    GTACATGGAG CATCCCAGTT AATGGCAATA CAGATTGATG CTGCCATAAA TCCTGGGAAT
    AGCGGTGGTC CAGCAATAAT GGGAAATAAA GTTGCCGGTG TGGCTTTCCA GAACCTATCA
    GGTGCTGAAA ATATTGGCTA TATAATTCCT GTTCCTGTAA TCAAGCATTT TATAAATGGT
    GTGGAAGAAA GTGGAAAATA TGTTGGATTC TGCTCTATGG GCCTATCATG CCAACCAACT
    GAAAATGTTC AACTGAGAAA GCACTTTGGT ATGCGCCCTG AAATGACAGG TGTGCTTGTG
    AGCAAAATTA ATCCACTGTC AGATGCACAC AGAGTCCTAA AAACAGATGA TATTATCCTT
    GCCTTTGATG GAGTGCCTAT AGCAAACGAT GGAACAGTGC CTTTCCGAAA CAGAGAGCGG
    ATAACTTTTG ATCACTTAGT GTCTATGAAG AAACCCAATG AAACAGCTTC AGTTAGACTT
    TTGAGGGGTG GTGAAGAGCA TGAATTCAGT ATCACCCTTA GACCTTTGCA GCCCCTAGTT
    CCTGTTCATC AATTTGATAA GCTTCCTAGT TATTACATTT TTGCTGGTCT GGTCTTTGTT
    CCACTAACAC AACCATATCT TCATGAGTAT GGAGAAGAAT GGTATAATAC ATCACCTCGT
    CGATTATGTG AACGTGCATT GAAAGAGCTG CCAAAAAAGG CTGACCAACA ACTTATCATT
    CTTTCTCAGG TGCTCATGGA CGATATAAAT GCTGGGTATG AGCGTCTTGC AGAACTACAG
    GTTAAGAAAG TCAATGGAGT AGAAATCGAC AATTTGAAGC ACCTGTGCCA ACTTATCAGG
    GACTGTAGTT CAGAGAGCTT GAGGTTTGAT TTAGATGATG ATAGGGTAAT TGCGTTGAAT
    TATCAGTCTG CAAAAGTAGC TACTTCCAGA ATTTTGAAAC GTCACAGGAT ACCTTCCGCC
    ATGTCCAGCG ACCTTAGTGC TGAACAAAAT ATACCAGAAA GTGAGTCGGC CAGCTCAAGC
    TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024462077.1
    CDS129..1871
    Translation

    Target ORF information:

    RefSeq Version XM_024606309.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa protease Do-like 10, mitochondrial (LOC7462128), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_024606309.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGTTGTCTT CATCAGGTCG TGCAGTGAGG AAGCTATGCT CCTCTTCTTC TTGCACCGCC 
    GCCTCTGTTA TCAGAAACCG TAACTTGTTG CTCAGAGAAA GATACATTTC CCCTCTTGTA
    TCATCAAATT TAGCAAAATA TTCGAAAACA ACACAACACA GAGCCATTCC TTCCCTTTTC
    AATAACTTTT CATTATATTC TACAACAGCA GAAGCATCAA CCGCAGCAAT AACATCAGCC
    TCAGCAGCAA CAGCTAACAA TCATTTGGAG GAGGCATCAC AACCAAACCT GAGTGATGCA
    TATTCTGCTA TAGAGCTTGC ATTAGATTCA GTTGTCAAGA TTTTTACTGT TTCAAGTAGC
    CCCAATTACT TCCTTCCATG GCAAAACAAG TCACAGCGTG AAACCATGGG TTCTGGATTT
    GTTATTACTG GAAAAAAAAT TCTTACAAAT GCTCATGTGG TGGCTGATCA TACATTTGTA
    CTCGTAAGAA AGCACGGGTC TCCCACCAAA TACAGAGCTG AAGTTCAAGC TGTTGGTCAT
    GAATGTGATT TAGCTATTCT AGTTGTTGAA AATGAAGAAT TCTGGAAGGG TATGAATTTC
    TTGGAGCTAG GAGACATCCC ATTTCTGCAG GAAGCTGTTG CAGTAGTCGG GTATCCTCAA
    GGTGGGGACA ACATATCTGT TACCAAAGGT GTTGTCTCCA GAGTTGAACC AACACAATAT
    GTACATGGAG CATCCCAGTT AATGGCAATA CAGATTGATG CTGCCATAAA TCCTGGGAAT
    AGCGGTGGTC CAGCAATAAT GGGAAATAAA GTTGCCGGTG TGGCTTTCCA GAACCTATCA
    GGTGCTGAAA ATATTGGCTA TATAATTCCT GTTCCTGTAA TCAAGCATTT TATAAATGGT
    GTGGAAGAAA GTGGAAAATA TGTTGGATTC TGCTCTATGG GCCTATCATG CCAACCAACT
    GAAAATGTTC AACTGAGAAA GCACTTTGGT ATGCGCCCTG AAATGACAGG TGTGCTTGTG
    AGCAAAATTA ATCCACTGTC AGATGCACAC AGAGTCCTAA AAACAGATGA TATTATCCTT
    GCCTTTGATG GAGTGCCTAT AGCAAACGAT GGAACAGTGC CTTTCCGAAA CAGAGAGCGG
    ATAACTTTTG ATCACTTAGT GTCTATGAAG AAACCCAATG AAACAGCTTC AGTTAGACTT
    TTGAGGGGTG GTGAAGAGCA TGAATTCAGT ATCACCCTTA GACCTTTGCA GCCCCTAGTT
    CCTGTTCATC AATTTGATAA GCTTCCTAGT TATTACATTT TTGCTGGTCT GGTCTTTGTT
    CCACTAACAC AACCATATCT TCATGAGTAT GGAGAAGAAT GGTATAATAC ATCACCTCGT
    CGATTATGTG AACGTGCATT GAAAGAGCTG CCAAAAAAGG CTGACCAACA ACTTATCATT
    CTTTCTCAGG TGCTCATGGA CGATATAAAT GCTGGGTATG AGCGTCTTGC AGAACTACAG
    GTTAAGAAAG TCAATGGAGT AGAAATCGAC AATTTGAAGC ACCTGTGCCA ACTTATCAGG
    GACTGTAGTT CAGAGAGCTT GAGGTTTGAT TTAGATGATG ATAGGGTAAT TGCGTTGAAT
    TATCAGTCTG CAAAAGTAGC TACTTCCAGA ATTTTGAAAC GTCACAGGAT ACCTTCCGCC
    ATGTCCAGCG ACCTTAGTGC TGAACAAAAT ATACCAGAAA GTGAGTCGGC CAGCTCAAGC
    TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D