ORF » Species Summary » Populus trichocarpa » POPTR_0013s10240g cDNA ORF clone

POPTR_0013s10240g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0013s10240g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0013s10240g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa28723 XM_006376086.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0013s10240g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
OPa441406 XM_006376086.2
Latest version!		 Populus trichocarpa glucuronoxylan 4-O-methyltransferase 3 (LOC18104325), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0013s10240g ( XM_006376086.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006376148.1 Populus trichocarpa hypothetical protein (POPTR_0013s10240g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa28723
    Clone ID Related Accession (Same CDS sequence) XM_006376086.1
    Accession Version XM_006376086.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 915bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008479). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGAGACCCA ACAAAAACCA ATCTCCCATT AACATCAAGA TCATCACCCT CAGTTTATTC 
    TTTCTTCTCT TCCTTGTGCT GGTAGCTTGG TCAAGCTTCT CATCTCCGAG ATCAAATCCA 
    TCCCCCAAAG CAGAAAATGA TGACCTAACA AACCCATCAT CAAGTCTGTC CACTGATGAA 
    GAAGATCAGC CCAAACCATC AACACCAGCC TGCCCTTCTC TTCCCCTGAC ACCAACATGC 
    ACCAAAACCC CACCTTCTTT AGCCAATGCT CTTGTCCATT ACGTTACAAC GAACATCACC 
    CCACAACAAA CCCTCAAAGA AATCTCGGTC ACATTAAGGG TCCTGGAGAA AAAGTCACCT 
    TGCAATTTCC TAGTCTTTGG TCTTGGTCAT GACAGTCTAA TGTGGACATC TCTAAATCAT 
    GGTGGCCGAA CTGTTTTCCT GGAAGAAGAC AAGGCTTGGA TTGAGCAAAT CACAGAGAAA 
    CTGCCCTCTT TAGAGGCCTA CCATGTGACG TACGACACCA GAGTGCATCA GGCAGATGGG 
    CTCATGGAGA CAGGAATGGG AGATGAATGC AAAGTTGTAA GCGACCCCAG ATTCTCCAAG 
    TGCCAGCTTT CTCTTAAAGG GTTCCCTAGT GATATTTATG ACATGGAATG GGACTTGATC 
    ATGGTGGATG CACCCACTGG GTATCATGAC GAGGCACCAG GGAGGATGAC TGCAATCTAC 
    ACGGCTGGAT TGATGGCTAG GAACAGAGAG AATGGAGAGA CTGATGTGTT TGTGCATGAT 
    GTTGATAGAG TTGTGGAGGA TAAATTCTCC AAGGCTTTTC TTTGTGAAGG ATACTTGACT 
    GAGCAGGAAG GGAGGTTAAG GCATTTCATC ATTCCTAGTC ATAGAACTCG TTCGGGCAGA 
    CCTTTTTGTC CTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006376148.1
    CDS52..966
    Translation

    Target ORF information:

    RefSeq Version XM_006376086.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0013s10240g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006376086.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGAGACCCA ACAAAAACCA ATCTCCCATT AACATCAAGA TCATCACCCT CAGTTTATTC 
    TTTCTTCTCT TCCTTGTGCT GGTAGCTTGG TCAAGCTTCT CATCTCCGAG ATCAAATCCA 
    TCCCCCAAAG CAGAAAATGA TGACCTAACA AACCCATCAT CAAGTCTGTC CACTGATGAA 
    GAAGATCAGC CCAAACCATC AACACCAGCC TGCCCTTCTC TTCCCCTGAC ACCAACATGC 
    ACCAAAACCC CACCTTCTTT AGCCAATGCT CTTGTCCATT ACGTTACAAC GAACATCACC 
    CCACAACAAA CCCTCAAAGA AATCTCGGTC ACATTAAGGG TCCTGGAGAA AAAGTCACCT 
    TGCAATTTCC TAGTCTTTGG TCTTGGTCAT GACAGTCTAA TGTGGACATC TCTAAATCAT 
    GGTGGCCGAA CTGTTTTCCT GGAAGAAGAC AAGGCTTGGA TTGAGCAAAT CACAGAGAAA 
    CTGCCCTCTT TAGAGGCCTA CCATGTGACG TACGACACCA GAGTGCATCA GGCAGATGGG 
    CTCATGGAGA CAGGAATGGG AGATGAATGC AAAGTTGTAA GCGACCCCAG ATTCTCCAAG 
    TGCCAGCTTT CTCTTAAAGG GTTCCCTAGT GATATTTATG ACATGGAATG GGACTTGATC 
    ATGGTGGATG CACCCACTGG GTATCATGAC GAGGCACCAG GGAGGATGAC TGCAATCTAC 
    ACGGCTGGAT TGATGGCTAG GAACAGAGAG AATGGAGAGA CTGATGTGTT TGTGCATGAT 
    GTTGATAGAG TTGTGGAGGA TAAATTCTCC AAGGCTTTTC TTTGTGAAGG ATACTTGACT 
    GAGCAGGAAG GGAGGTTAAG GCATTTCATC ATTCCTAGTC ATAGAACTCG TTCGGGCAGA 
    CCTTTTTGTC CTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0013s10240g ( XM_006376086.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006376148.2 Populus trichocarpa glucuronoxylan 4-O-methyltransferase 3 (LOC18104325), mRNA.
    Price & Availability↑
    CloneID OPa441406
    Clone ID Related Accession (Same CDS sequence) XM_006376086.2
    Accession Version XM_006376086.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 924bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product glucuronoxylan 4-O-methyltransferase 3
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037297.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006376086.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGAGACCCA ACAAAAACCA ATCTCCCATT AACATCAAGA ACATCAAGAT CATCACCCTC 
    AGTTTATTCT TTCTTCTCTT CCTTGTGCTG GTAGCTTGGT CAAGCTTCTC ATCTCCGAGA 
    TCAAATCCAT CCCCCAAAGC AGAAAATGAT GACCTAACAA ACCCATCATC AAGTCTATCC 
    ACTGATGAAG AAGATCAGCC CAAACCATCA ACACCAGCCT GCCCTTCTCT TCCCCTGACA 
    CCAACATGCA CCAAAACCCC ACCTTCTTTA GCCAATGCTC TTGTCCATTA CGTTACAACG 
    AACATCACCC CACAACAAAC CCTCAAAGAA ATCTCGGTCA CATTAAGGGT CCTGGAGAAA 
    AAGTCACCTT GCAATTTCCT AGTCTTTGGT CTTGGTCATG ACAGTCTAAT GTGGACATCT 
    CTAAATCATG GTGGCCGAAC TGTTTTCCTG GAAGAAGACA AGGCTTGGAT TGAGCAAATC 
    ACAGAGAAAC TGCCCTCTTT AGAGGCCTAC CATGTGACGT ACGACACCAG AGTGCATCAG 
    GCAGATGGGC TCATGGAGAC AGGAATGGGA GATGAATGCA AAGTTGTAAG CGACCCCAGA 
    TTCTCCAAGT GCCAGCTTTC TCTTAAAGGG TTCCCTAGTG ATATTTATGA CATGGAATGG 
    GACTTGATCA TGGTGGATGC ACCCACTGGG TATCATGACG AGGCACCAGG GAGGATGACT 
    GCAATCTACA CGGCTGGATT GATGGCTAGG AACAGAGAGA ATGGAGAGAC TGATGTGTTT 
    GTGCATGATG TTGATAGAGT TGTGGAGGAT AAATTCTCCA AGGCTTTTCT TTGTGAAGGA 
    TACTTGACTG AGCAGGAAGG GAGGTTAAGG CATTTCATCA TTCCTAGTCA TAGAACTCGT 
    TCGGGCAGAC CTTTTTGTCC TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006376148.2
    CDS171..1094
    Translation

    Target ORF information:

    RefSeq Version XM_006376086.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa glucuronoxylan 4-O-methyltransferase 3 (LOC18104325), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006376086.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGAGACCCA ACAAAAACCA ATCTCCCATT AACATCAAGA ACATCAAGAT CATCACCCTC 
    AGTTTATTCT TTCTTCTCTT CCTTGTGCTG GTAGCTTGGT CAAGCTTCTC ATCTCCGAGA 
    TCAAATCCAT CCCCCAAAGC AGAAAATGAT GACCTAACAA ACCCATCATC AAGTCTATCC 
    ACTGATGAAG AAGATCAGCC CAAACCATCA ACACCAGCCT GCCCTTCTCT TCCCCTGACA 
    CCAACATGCA CCAAAACCCC ACCTTCTTTA GCCAATGCTC TTGTCCATTA CGTTACAACG 
    AACATCACCC CACAACAAAC CCTCAAAGAA ATCTCGGTCA CATTAAGGGT CCTGGAGAAA 
    AAGTCACCTT GCAATTTCCT AGTCTTTGGT CTTGGTCATG ACAGTCTAAT GTGGACATCT 
    CTAAATCATG GTGGCCGAAC TGTTTTCCTG GAAGAAGACA AGGCTTGGAT TGAGCAAATC 
    ACAGAGAAAC TGCCCTCTTT AGAGGCCTAC CATGTGACGT ACGACACCAG AGTGCATCAG 
    GCAGATGGGC TCATGGAGAC AGGAATGGGA GATGAATGCA AAGTTGTAAG CGACCCCAGA 
    TTCTCCAAGT GCCAGCTTTC TCTTAAAGGG TTCCCTAGTG ATATTTATGA CATGGAATGG 
    GACTTGATCA TGGTGGATGC ACCCACTGGG TATCATGACG AGGCACCAGG GAGGATGACT 
    GCAATCTACA CGGCTGGATT GATGGCTAGG AACAGAGAGA ATGGAGAGAC TGATGTGTTT 
    GTGCATGATG TTGATAGAGT TGTGGAGGAT AAATTCTCCA AGGCTTTTCT TTGTGAAGGA 
    TACTTGACTG AGCAGGAAGG GAGGTTAAGG CATTTCATCA TTCCTAGTCA TAGAACTCGT 
    TCGGGCAGAC CTTTTTGTCC TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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