LOC111001222 cDNA ORF clone, Pieris rapae(cabbage white)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC111001222
Entrez Gene ID	111001222
Full Name	tetratricopeptide repeat protein 17
Gene Type	protein-coding
Organism	Pieris rapae(cabbage white)

mRNA and Protein(s)

mRNA	Protein	Name
XM_022271020.1	XP_022126712.1	tetratricopeptide repeat protein 17

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Genomic adaptation to agricultural environments: cabbage white butterflies (Pieris rapae) as a case study.
Sikkink KL, Kobiela ME, Snell-Rood EC
BMC genomics18(1)412(2017 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC111001222 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC111001222 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPi86923	XM_022271020.1 Latest version!	Pieris rapae tetratricopeptide repeat protein 17 (LOC111001222), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$629.30 $899.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC111001222 ( XM_022271020.1 ) cDNA ORF clone, Pieris rapae(cabbage white) -> XP_022126712.1 Pieris rapae tetratricopeptide repeat protein 17 (LOC111001222), mRNA.

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CloneID	OPi86923
Clone ID Related Accession (Same CDS sequence)	XM_022271020.1
Accession Version	XM_022271020.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3372bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-08-09
Organism	Pieris rapae(cabbage white)
Product	tetratricopeptide repeat protein 17
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_019093981.1) and transcript sequence (GFMO01013891.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pieris rapae Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 157 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGATTTGTT GTAAATTTAT TTTGTGCGTT CGTTTCTTAA TTTTAATAAC ATGCGCTGAA 
AGAGTGCAGG CTTCGTCCCA CTGGATGGTT ACTGAAAGCG GATTAATTCA GCCCAGGCTG 
GATTCTCCAT TTGAAATGGC TCGACCTTAT GACTTTTTAT CATTTTTAAA ACAAGAAACT 
CGTTGGGATG AAATTATTAA GATGCACCAT GAGTTATCAA AAAAGCAAAA ATTTCTTGAT 
GACCTCTGGA CAGATATTGA AAAAGATACA GATTTAGGTG TTGATGTTGG AAAGGATGAA 
AATTGCATGA GGGCAGGCCC TCTTAACATG ATTGATTGGT ATCATACACC TTTAGAAGAT 
GGTACCATAA AAAATATTGC AGAAGAAGAA TTTTTGCTCC CAAGCAGTTA TGGGCCAAGT 
ATTGATGTAC CTGATTGTAA AAAGATATCA TCCCTGACCT TCAGTATGTT TACTTTTGAA 
CATTTGAGTA GTATGATAAA AAGAACAAAT ATTTCAATTA CACCAGAGTA CCCTTCACTG 
GATATTATAT CACCTGCAGC ATCTGTTGAG CAATTTGGAC ATTGGTTAGC AGGTGCCTTA 
AGAAAAAATA GTTCATCATG GCTGCATTAT AATTTAGCAG CTTTATTTTG GAGAATTAAA 
GGAAATGCAC CGAAAGCTTT AGAGTGCTGC CGTCGAGCAG TGCATTATGC ACCAAGACAA 
TATAAAGATA TAGCCTTATT AAACTTAGGA TCTCTGCTGT ATCGTGCCAA AAAGTATGCT 
GATGCTATAA CAATATTAAA TGGTGCCCTT GACCATGATT CTCACAACTC TATTGCACAT 
TTTGTGCTTG GGAATATTTA TACGTATTTG GGTGAATTTA ATATATCACT TGCTCACTAT 
AAAGTGTCCT TGGGAATTAA TCCAAAGATG GATATAGCTA AGAAACACAA ATATGCAACA 
TTATGTCATG TACATTTGGG TGGAAGAATA CGGAATTTAA AAGTTAAAAT AGATAAACTG 
CGCGAAGGAT TGAGTGAATA TATTCTTAAA GAATCAATGT GGATTAAAAC GCAGAGCGAA 
TTTTTAAAGA CGATGAAACC AATTGATGGA TACGACTATA AAAACGTAGA AAAAAACTGC 
GCAAAGATGT CAGAATTGAC AGGACTCAGG ATCAGTGAAG TAAAAATGTT GGGTGATAGA 
TACTCTTTGA TAAAATACTT TTTTGATGGT CCGATATACA ATGATAGGTT AATGGAAGTG 
ACTGGTACTG CCAATTTGGA CGCTATTTAC ACGTTGCAAA GGATCGTAAG TCATATACAG 
AGACATGCCA ATATGGCGGA CATATTAGTG CATTTCAATA AGGACGAACC GATTGAAGAC 
CAAACTGCTA AGCCCGAACA AATTGCACAG AGTGAAGAAG TCCAATCGGA TGTTGAAAAG 
AAAACTCAAA CGAGTGATCA ATTCTCTGAA TTTGAAAGTG GAATATTTTT ATACCCACCA 
ACACTAAAAA TAAACAGAAA TGTCGAAGAT TTTGACAAAG ACGCGAATTG GCCGTCAGAT 
GCAATGTGTG CACAGGCGTT GCATACGTTT CCTGATAATA TGGAGGCGAT GTACCCGGTC 
TTCTTGCCAT TGGAGAATAA AGGAATAAGA GTGAAGACAC TTCTTACTGA CAAGATCGGA 
GTTCCTCTTG ACGAAGAGCA TGAGTTGCCG TGGCATCCGC CCGTCTGCCC CACTGATAAG 
GAAGGAAGGA AATCTTTTAA GCAACAATTA ATAACTGAAG TCGTCGAATC GGATATTCTA 
AGACAGAAGT TGCTAGAATA TGTCGGCGAT GGAGATATAG AGAAAGCGGA ACATATGCAA 
GATGCTGAAA TTGGGCACCG AATATATGTA GCAATGAAGA CGAAATCAGC CCCAAAATGG 
ATAACTCAAG TTTTAGCGTC TCTCTATTGG CGTGTTCGTG GTAATAGGGT TAATGCTTTG 
CATTGCCTTC AAGCGGCGAA TAAAGTTGTC CCCCCGAAGT ACAAAGAAGT GGTTTTGGTG 
TCTTTGGGCT CCGTACTTAT TGAGATGGGT TGCTTTGAGG AGGCAGTGGC AGCCACCGAA 
GAAGCCTTTA GGTTGAATTT GTATGAGCCA GCAACAAATT TCCTGTTAGG CGAACTAAAC 
ATGATAAAGC GGCACAGATG GACACACATG TTCCACCTAC AACAAGTAGT GCGAGTGGAG 
CCGGGGTTCA TGAATGGTCT GGCGAAGAAT CTCCTAAATG CGTGGGCCTG CATCATGAAG 
GAAGTCAACA AGTTTCAAGA GATGGATTTC ATAGAAGGAG ACATATGTAC ACAAGTGGAG 
CCAGGAATGA ATATGGTGTG TGAGAAGGGA GGAGAAAATT GTCATATGAC TAACATCCAG 
TGCTTCAGTA GTCAGGATAG ATCGGATACG AGTATGATAA TGAAGCTTCT AGAACAACAT 
GATAAGACGT ATCAATCAAA GGATATGATG AGCGATGACT TCTTCAATTT CGTGATACAG 
AGAATGCCGA GCGATAGAAC GGACAGGCTT GCGCATCAAG CGAATTACGA CCATATGATG 
AAGGCAGTAG AGACGGTTTT GCATGGATGT GGGCCTTTGG GGTGTAAGAG TCTGCAACCC 
GCTGATTTAG CGCTTACAGA AGAAGAATGC TCGCATCATT ATATACAACT TGGATATTGG 
TTGCACATTG TCAGTTTTAA ACAACTCTTT TCTGATACAA ATATACGAAT ACCGTCAGAC 
ATTATAACAA TGAATCCGTC GAATAAGAAA ATACCAGAAT GCAAGGTGGT ATCCGAGCCA 
TTGGAAGATT TTTACTACGA GAGACTCAGT CGCATCGATA CAGAAGGCTG GCAACCCATC 
ATGACGCTTA CTCATCAGTT CGCTGAACTG TTCAACTACT TTGACTATGT TACGTTGGGA 
GCTAAAATCG CTAAATACGT GGAAGCTCGG CCGTCGTCGT GGGTGGCGGC TCTAAGCGCT 
AGTTGGTGGT GCGGGGCAGG CGGACACGGC GCCTGCGCAG TACGCTGCGC GGCCGCCGCC 
CACGCCCTTG CACCGCAGCA TTATTCCTCA TACCCCCTTC GGGCATTGGT CGCCTTGTTG 
CATATGCATT CCAAAGGAAA AGACGCCAAG GACGTGGCCT ATCTCTCCTT CTATGGATCA 
CCAAAGAGCA AAATCGAAGC ATTTTTAGTC GCCATCTCTC ATACATATCT TGAAGAATTC 
GATCAAGCAG TGTGGATGTA TCGCTACTCC CTGGTATTTG ACGAACAGTT TAAACCTGCC 
AAAGCCTGTC TCCACGCTAC CATGTGTCTT ATGTTAATTC CGGAACCAAA TAAGGGTATA 
AAAAATAAAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_022126712.1
CDS	171..3542
Translation	MICCKFILCVRFLILITCAERVQASSHWMVTESGLIQPRLDSPFEMARPYDFLSFLKQETRWDEIIKMHHELSKKQKFLDDLWTDIEKDTDLGVDVGKDENCMRAGPLNMIDWYHTPLEDGTIKNIAEEEFLLPSSYGPSIDVPDCKKISSLTFSMFTFEHLSSMIKRTNISITPEYPSLDIISPAASVEQFGHWLAGALRKNSSSWLHYNLAALFWRIKGNAPKALECCRRAVHYAPRQYKDIALLNLGSLLYRAKKYADAITILNGALDHDSHNSIAHFVLGNIYTYLGEFNISLAHYKVSLGINPKMDIAKKHKYATLCHVHLGGRIRNLKVKIDKLREGLSEYILKESMWIKTQSEFLKTMKPIDGYDYKNVEKNCAKMSELTGLRISEVKMLGDRYSLIKYFFDGPIYNDRLMEVTGTANLDAIYTLQRIVSHIQRHANMADILVHFNKDEPIEDQTAKPEQIAQSEEVQSDVEKKTQTSDQFSEFESGIFLYPPTLKINRNVEDFDKDANWPSDAMCAQALHTFPDNMEAMYPVFLPLENKGIRVKTLLTDKIGVPLDEEHELPWHPPVCPTDKEGRKSFKQQLITEVVESDILRQKLLEYVGDGDIEKAEHMQDAEIGHRIYVAMKTKSAPKWITQVLASLYWRVRGNRVNALHCLQAANKVVPPKYKEVVLVSLGSVLIEMGCFEEAVAATEEAFRLNLYEPATNFLLGELNMIKRHRWTHMFHLQQVVRVEPGFMNGLAKNLLNAWACIMKEVNKFQEMDFIEGDICTQVEPGMNMVCEKGGENCHMTNIQCFSSQDRSDTSMIMKLLEQHDKTYQSKDMMSDDFFNFVIQRMPSDRTDRLAHQANYDHMMKAVETVLHGCGPLGCKSLQPADLALTEEECSHHYIQLGYWLHIVSFKQLFSDTNIRIPSDIITMNPSNKKIPECKVVSEPLEDFYYERLSRIDTEGWQPIMTLTHQFAELFNYFDYVTLGAKIAKYVEARPSSWVAALSASWWCGAGGHGACAVRCAAAAHALAPQHYSSYPLRALVALLHMHSKGKDAKDVAYLSFYGSPKSKIEAFLVAISHTYLEEFDQAVWMYRYSLVFDEQFKPAKACLHATMCLMLIPEPNKGIKNK

Target ORF information:

RefSeq Version	XM_022271020.1
Organism	Pieris rapae(cabbage white)
Definition	Pieris rapae tetratricopeptide repeat protein 17 (LOC111001222), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_022271020.1

ORF Insert Sequence:

ATGATTTGTT GTAAATTTAT TTTGTGCGTT CGTTTCTTAA TTTTAATAAC ATGCGCTGAA 
AGAGTGCAGG CTTCGTCCCA CTGGATGGTT ACTGAAAGCG GATTAATTCA GCCCAGGCTG 
GATTCTCCAT TTGAAATGGC TCGACCTTAT GACTTTTTAT CATTTTTAAA ACAAGAAACT 
CGTTGGGATG AAATTATTAA GATGCACCAT GAGTTATCAA AAAAGCAAAA ATTTCTTGAT 
GACCTCTGGA CAGATATTGA AAAAGATACA GATTTAGGTG TTGATGTTGG AAAGGATGAA 
AATTGCATGA GGGCAGGCCC TCTTAACATG ATTGATTGGT ATCATACACC TTTAGAAGAT 
GGTACCATAA AAAATATTGC AGAAGAAGAA TTTTTGCTCC CAAGCAGTTA TGGGCCAAGT 
ATTGATGTAC CTGATTGTAA AAAGATATCA TCCCTGACCT TCAGTATGTT TACTTTTGAA 
CATTTGAGTA GTATGATAAA AAGAACAAAT ATTTCAATTA CACCAGAGTA CCCTTCACTG 
GATATTATAT CACCTGCAGC ATCTGTTGAG CAATTTGGAC ATTGGTTAGC AGGTGCCTTA 
AGAAAAAATA GTTCATCATG GCTGCATTAT AATTTAGCAG CTTTATTTTG GAGAATTAAA 
GGAAATGCAC CGAAAGCTTT AGAGTGCTGC CGTCGAGCAG TGCATTATGC ACCAAGACAA 
TATAAAGATA TAGCCTTATT AAACTTAGGA TCTCTGCTGT ATCGTGCCAA AAAGTATGCT 
GATGCTATAA CAATATTAAA TGGTGCCCTT GACCATGATT CTCACAACTC TATTGCACAT 
TTTGTGCTTG GGAATATTTA TACGTATTTG GGTGAATTTA ATATATCACT TGCTCACTAT 
AAAGTGTCCT TGGGAATTAA TCCAAAGATG GATATAGCTA AGAAACACAA ATATGCAACA 
TTATGTCATG TACATTTGGG TGGAAGAATA CGGAATTTAA AAGTTAAAAT AGATAAACTG 
CGCGAAGGAT TGAGTGAATA TATTCTTAAA GAATCAATGT GGATTAAAAC GCAGAGCGAA 
TTTTTAAAGA CGATGAAACC AATTGATGGA TACGACTATA AAAACGTAGA AAAAAACTGC 
GCAAAGATGT CAGAATTGAC AGGACTCAGG ATCAGTGAAG TAAAAATGTT GGGTGATAGA 
TACTCTTTGA TAAAATACTT TTTTGATGGT CCGATATACA ATGATAGGTT AATGGAAGTG 
ACTGGTACTG CCAATTTGGA CGCTATTTAC ACGTTGCAAA GGATCGTAAG TCATATACAG 
AGACATGCCA ATATGGCGGA CATATTAGTG CATTTCAATA AGGACGAACC GATTGAAGAC 
CAAACTGCTA AGCCCGAACA AATTGCACAG AGTGAAGAAG TCCAATCGGA TGTTGAAAAG 
AAAACTCAAA CGAGTGATCA ATTCTCTGAA TTTGAAAGTG GAATATTTTT ATACCCACCA 
ACACTAAAAA TAAACAGAAA TGTCGAAGAT TTTGACAAAG ACGCGAATTG GCCGTCAGAT 
GCAATGTGTG CACAGGCGTT GCATACGTTT CCTGATAATA TGGAGGCGAT GTACCCGGTC 
TTCTTGCCAT TGGAGAATAA AGGAATAAGA GTGAAGACAC TTCTTACTGA CAAGATCGGA 
GTTCCTCTTG ACGAAGAGCA TGAGTTGCCG TGGCATCCGC CCGTCTGCCC CACTGATAAG 
GAAGGAAGGA AATCTTTTAA GCAACAATTA ATAACTGAAG TCGTCGAATC GGATATTCTA 
AGACAGAAGT TGCTAGAATA TGTCGGCGAT GGAGATATAG AGAAAGCGGA ACATATGCAA 
GATGCTGAAA TTGGGCACCG AATATATGTA GCAATGAAGA CGAAATCAGC CCCAAAATGG 
ATAACTCAAG TTTTAGCGTC TCTCTATTGG CGTGTTCGTG GTAATAGGGT TAATGCTTTG 
CATTGCCTTC AAGCGGCGAA TAAAGTTGTC CCCCCGAAGT ACAAAGAAGT GGTTTTGGTG 
TCTTTGGGCT CCGTACTTAT TGAGATGGGT TGCTTTGAGG AGGCAGTGGC AGCCACCGAA 
GAAGCCTTTA GGTTGAATTT GTATGAGCCA GCAACAAATT TCCTGTTAGG CGAACTAAAC 
ATGATAAAGC GGCACAGATG GACACACATG TTCCACCTAC AACAAGTAGT GCGAGTGGAG 
CCGGGGTTCA TGAATGGTCT GGCGAAGAAT CTCCTAAATG CGTGGGCCTG CATCATGAAG 
GAAGTCAACA AGTTTCAAGA GATGGATTTC ATAGAAGGAG ACATATGTAC ACAAGTGGAG 
CCAGGAATGA ATATGGTGTG TGAGAAGGGA GGAGAAAATT GTCATATGAC TAACATCCAG 
TGCTTCAGTA GTCAGGATAG ATCGGATACG AGTATGATAA TGAAGCTTCT AGAACAACAT 
GATAAGACGT ATCAATCAAA GGATATGATG AGCGATGACT TCTTCAATTT CGTGATACAG 
AGAATGCCGA GCGATAGAAC GGACAGGCTT GCGCATCAAG CGAATTACGA CCATATGATG 
AAGGCAGTAG AGACGGTTTT GCATGGATGT GGGCCTTTGG GGTGTAAGAG TCTGCAACCC 
GCTGATTTAG CGCTTACAGA AGAAGAATGC TCGCATCATT ATATACAACT TGGATATTGG 
TTGCACATTG TCAGTTTTAA ACAACTCTTT TCTGATACAA ATATACGAAT ACCGTCAGAC 
ATTATAACAA TGAATCCGTC GAATAAGAAA ATACCAGAAT GCAAGGTGGT ATCCGAGCCA 
TTGGAAGATT TTTACTACGA GAGACTCAGT CGCATCGATA CAGAAGGCTG GCAACCCATC 
ATGACGCTTA CTCATCAGTT CGCTGAACTG TTCAACTACT TTGACTATGT TACGTTGGGA 
GCTAAAATCG CTAAATACGT GGAAGCTCGG CCGTCGTCGT GGGTGGCGGC TCTAAGCGCT 
AGTTGGTGGT GCGGGGCAGG CGGACACGGC GCCTGCGCAG TACGCTGCGC GGCCGCCGCC 
CACGCCCTTG CACCGCAGCA TTATTCCTCA TACCCCCTTC GGGCATTGGT CGCCTTGTTG 
CATATGCATT CCAAAGGAAA AGACGCCAAG GACGTGGCCT ATCTCTCCTT CTATGGATCA 
CCAAAGAGCA AAATCGAAGC ATTTTTAGTC GCCATCTCTC ATACATATCT TGAAGAATTC 
GATCAAGCAG TGTGGATGTA TCGCTACTCC CTGGTATTTG ACGAACAGTT TAAACCTGCC 
AAAGCCTGTC TCCACGCTAC CATGTGTCTT ATGTTAATTC CGGAACCAAA TAAGGGTATA 
AAAAATAAAT GA