LOC110995433 cDNA ORF clone, Pieris rapae(cabbage white)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC110995433
Entrez Gene ID	110995433
Full Name	homogentisate 1,2-dioxygenase
Gene Type	protein-coding
Organism	Pieris rapae(cabbage white)

mRNA and Protein(s)

mRNA	Protein	Name
XM_022262598.1	XP_022118290.1	homogentisate 1,2-dioxygenase

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Genomic adaptation to agricultural environments: cabbage white butterflies (Pieris rapae) as a case study.
Sikkink KL, Kobiela ME, Snell-Rood EC
BMC genomics18(1)412(2017 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC110995433 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC110995433 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPi80240	XM_022262598.1 Latest version!	Pieris rapae homogentisate 1,2-dioxygenase (LOC110995433), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC110995433 ( XM_022262598.1 ) cDNA ORF clone, Pieris rapae(cabbage white) -> XP_022118290.1 Pieris rapae homogentisate 1,2-dioxygenase (LOC110995433), mRNA.

Price & Availability↑

CloneID	OPi80240
Clone ID Related Accession (Same CDS sequence)	XM_022262598.1
Accession Version	XM_022262598.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1314bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-08-09
Organism	Pieris rapae(cabbage white)
Product	homogentisate 1,2-dioxygenase
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_019093327.1) and transcript sequence (GFMO01009937.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pieris rapae Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 464 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGACGGAGT TAAAGTATCT GTCTGGCTTT GGTTCGGAAT TCTTAAGTGA AGACCCGCGT 
AGGCCTGGGG CCCTACCAGT GGGACAGAAT AGTCCTCAAA GATGTCCATA CGGACTTTAC 
GCAGAACAGC TGTCTGGTAG TGCGTTTACT GCTCCGAGAA ATGAAAACAA ACGTTCGTGG 
CTTTACAGGA TCCGTCCATC TGTGGTGCAT AAGCCGTTCA AAAGGTCGAA TATTGCTAAG 
TACTTAACAC ACAACTGGAA TGAAGTCGAA CCGGATCCTA ATCAATCTCG CTGGTCACCT 
TTCGATATAC CAAATGAAAA GGTGGATTTC GTTGCCGGCT TGCATACAGT TTGCGGCGCG 
GGCGACCCTC GAGCACGTAA TGGAATCGCC ATCCATGTTT ACCTTTGTAA TAGCGCAATG 
GATAAAAGTG CTTTTTACAG CAGCGATGGT GATCTACTTA TTGTACCACA ACAAGGAGTT 
CTGAAGATCA CAACCGAGTT TGGGAAAATG GAGGTGGCAC CAAATGAAAT CGCTGTCATT 
CAACTTGGAA TGAGATTTGC TGTAGAAGTT GATGGACCTA CAAGGGGATA CATCCTCGAA 
GTATTCGATG GTCATTTTAA GCTACCAGAC CTTGGACCCA TTGGTGCCAA TGGGCTAGCC 
AACCCCCGTG ACTTTCTTAC CCCAGTCGCT TGTTACCATG ATGAAGAAAT ACCAGGATTC 
AAAATAATAA ACAAATACCA TGGAGTGTTG TTCGAAGCTG AACAAAATCA TTCACCATTC 
GACGTTGTGG CATGGCATGG CAACTATGTA CCTTACAAAT ACGACCTGAG CAAGTTTATG 
GTCATCAATT CTGTATCTTT TGACCACTGT GATCCATCAA TATTCACAGT TCTGACTTGC 
CAATCCACCA AACCAGGGGT CGCTATAGCA GATTTTGTTA TCTTCCCGCC GAGGTGGTCG 
GTTCAAGAGA ACACTTTTAG ACCCCCGTAC TACCACAGAA ACTGTATGAG CGAATTCATG 
GGTCTGATCC TGGGGTCATA TGAGGCAAAG GAAGGTGGCT TTCTTCCCGG CGGAGCATCT 
TTACACTCCA TGATGACTCC ACATGGTCCT GATACCCAAT GCTTTACGGC TGCTTCATCA 
GGTGAACTTA CTCCACAGAA AATTGCAGTC GGGACTCAGG CATTCATGTT CGAGTCATCT 
CTGAGTATGG CCATCACGAA GTGGGGAGCT GAAACGTGCC AAAAACTCGA CCCAGAATAT 
CATCAATGTT GGCAGCAATT GCCCAAATTG TTTTCAAATC ATTTTAATGT CTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_022118290.1
CDS	133..1446
Translation	MTELKYLSGFGSEFLSEDPRRPGALPVGQNSPQRCPYGLYAEQLSGSAFTAPRNENKRSWLYRIRPSVVHKPFKRSNIAKYLTHNWNEVEPDPNQSRWSPFDIPNEKVDFVAGLHTVCGAGDPRARNGIAIHVYLCNSAMDKSAFYSSDGDLLIVPQQGVLKITTEFGKMEVAPNEIAVIQLGMRFAVEVDGPTRGYILEVFDGHFKLPDLGPIGANGLANPRDFLTPVACYHDEEIPGFKIINKYHGVLFEAEQNHSPFDVVAWHGNYVPYKYDLSKFMVINSVSFDHCDPSIFTVLTCQSTKPGVAIADFVIFPPRWSVQENTFRPPYYHRNCMSEFMGLILGSYEAKEGGFLPGGASLHSMMTPHGPDTQCFTAASSGELTPQKIAVGTQAFMFESSLSMAITKWGAETCQKLDPEYHQCWQQLPKLFSNHFNV

Target ORF information:

RefSeq Version	XM_022262598.1
Organism	Pieris rapae(cabbage white)
Definition	Pieris rapae homogentisate 1,2-dioxygenase (LOC110995433), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_022262598.1

ORF Insert Sequence:

ATGACGGAGT TAAAGTATCT GTCTGGCTTT GGTTCGGAAT TCTTAAGTGA AGACCCGCGT 
AGGCCTGGGG CCCTACCAGT GGGACAGAAT AGTCCTCAAA GATGTCCATA CGGACTTTAC 
GCAGAACAGC TGTCTGGTAG TGCGTTTACT GCTCCGAGAA ATGAAAACAA ACGTTCGTGG 
CTTTACAGGA TCCGTCCATC TGTGGTGCAT AAGCCGTTCA AAAGGTCGAA TATTGCTAAG 
TACTTAACAC ACAACTGGAA TGAAGTCGAA CCGGATCCTA ATCAATCTCG CTGGTCACCT 
TTCGATATAC CAAATGAAAA GGTGGATTTC GTTGCCGGCT TGCATACAGT TTGCGGCGCG 
GGCGACCCTC GAGCACGTAA TGGAATCGCC ATCCATGTTT ACCTTTGTAA TAGCGCAATG 
GATAAAAGTG CTTTTTACAG CAGCGATGGT GATCTACTTA TTGTACCACA ACAAGGAGTT 
CTGAAGATCA CAACCGAGTT TGGGAAAATG GAGGTGGCAC CAAATGAAAT CGCTGTCATT 
CAACTTGGAA TGAGATTTGC TGTAGAAGTT GATGGACCTA CAAGGGGATA CATCCTCGAA 
GTATTCGATG GTCATTTTAA GCTACCAGAC CTTGGACCCA TTGGTGCCAA TGGGCTAGCC 
AACCCCCGTG ACTTTCTTAC CCCAGTCGCT TGTTACCATG ATGAAGAAAT ACCAGGATTC 
AAAATAATAA ACAAATACCA TGGAGTGTTG TTCGAAGCTG AACAAAATCA TTCACCATTC 
GACGTTGTGG CATGGCATGG CAACTATGTA CCTTACAAAT ACGACCTGAG CAAGTTTATG 
GTCATCAATT CTGTATCTTT TGACCACTGT GATCCATCAA TATTCACAGT TCTGACTTGC 
CAATCCACCA AACCAGGGGT CGCTATAGCA GATTTTGTTA TCTTCCCGCC GAGGTGGTCG 
GTTCAAGAGA ACACTTTTAG ACCCCCGTAC TACCACAGAA ACTGTATGAG CGAATTCATG 
GGTCTGATCC TGGGGTCATA TGAGGCAAAG GAAGGTGGCT TTCTTCCCGG CGGAGCATCT 
TTACACTCCA TGATGACTCC ACATGGTCCT GATACCCAAT GCTTTACGGC TGCTTCATCA 
GGTGAACTTA CTCCACAGAA AATTGCAGTC GGGACTCAGG CATTCATGTT CGAGTCATCT 
CTGAGTATGG CCATCACGAA GTGGGGAGCT GAAACGTGCC AAAAACTCGA CCCAGAATAT 
CATCAATGTT GGCAGCAATT GCCCAAATTG TTTTCAAATC ATTTTAATGT CTAA