HOXD9 cDNA ORF clone, Lepidothrix coronata(blue-crowned manakin)

Gene
Clones
gRNAs

Summary

Gene Symbol	HOXD9
Entrez Gene ID	108508696
Full Name	homeobox D9
Gene Type	protein-coding
Organism	Lepidothrix coronata(blue-crowned manakin)

mRNA and Protein(s)

mRNA	Protein	Name
XM_017837703.1	XP_017693192.1	homeobox protein Hox-D9 isoform X2
XM_017837693.1	XP_017693182.1	homeobox protein Hox-D9 isoform X1

Pathways from BioSystems
Gene Ontology

The following HOXD9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HOXD9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLe50364	XM_017837693.1 Latest version!	Lepidothrix coronata homeobox D9 (HOXD9), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00
OLe50365	XM_017837703.1 Latest version!	Lepidothrix coronata homeobox D9 (HOXD9), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

HOXD9 ( XM_017837693.1 ) cDNA ORF clone, Lepidothrix coronata(blue-crowned manakin) -> XP_017693182.1 Lepidothrix coronata homeobox D9 (HOXD9), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OLe50364
Clone ID Related Accession (Same CDS sequence)	XM_017837693.1
Accession Version	XM_017837693.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 894bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-08-10
Organism	Lepidothrix coronata(blue-crowned manakin)
Product	homeobox protein Hox-D9 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_016690187.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Lepidothrix coronata Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTCGTCTA GTGGCACCAT AAGTAACTAT TATGTCGATT CTCTCATAGG CCATGAAAGC 
GAAGAAGTTT ACGGGAGTAG ATTCGTCCAG GGAGGTCACA GTGCGACCTC CAGGCCATCA 
GGTGTTGCAG AGAGTTCAGA TTTTTCCTCT TGTAGCTTTG CACCAAAATC CACGGTGTTC 
TCCACCTCCT GGTCCGCGGT TCACCCTCAG CCGTCTGCGG CAATGACCGG GATCTACCAC 
CCCTACATGC ACCAGCCCCA TTTAGGGGCA GCCGACGCTG GCCGCTACGT GCGCTCCTGG 
ATTGAGCCCT TCCCGGGCTT CCCGGGTGGC GGCGGCGGAG GCAGCAGCAG CAGCGGCGGC 
TCTGCGTCCA GCTCCGGCTC CTCCAACGGG CGCCACTACG GGATAAAGCC GGAGACGGGA 
GCAGCCGCCT CCTCGTCTTC CTCCTCCTCT TCCTCCTCCT CCAAAAGGAC TGAGTGCTCC 
TCATCTCGGG AGTCCCAGGG GATCGGTGTG CCCGAGTACA CGTGCAGCTC CTTCCTCCAG 
GAGCCCCGGG AGAAAGCGGC TGCCGGCAGC TCCAAGGACC CCGCCGCTTG CAGTCACAAC 
CCCAGCCCGG GCAGCGATCT GAAGGAGGAG AAACAGCAGC AACTTGACCC AAATAACCCT 
GCAGCAAACT GGATCCACGC TCGTTCAACG AGGAAAAAGC GTTGTCCCTA CACAAAGTAT 
CAAACTCTGG AACTGGAAAA GGAATTTCTC TTTAACATGT ACCTCACCCG AGACCGCCGT 
TACGAAGTAG CTAGGATTTT AAACCTCACA GAGAGACAGG TCAAAATCTG GTTTCAGAAC 
AGAAGAATGA AAATGAAAAA GATGAACAAG GAGAAAGGCA ATAAAGGAGA CTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017693182.1
CDS	237..1130
Translation	MSSSGTISNYYVDSLIGHESEEVYGSRFVQGGHSATSRPSGVAESSDFSSCSFAPKSTVFSTSWSAVHPQPSAAMTGIYHPYMHQPHLGAADAGRYVRSWIEPFPGFPGGGGGGSSSSGGSASSSGSSNGRHYGIKPETGAAASSSSSSSSSSSKRTECSSSRESQGIGVPEYTCSSFLQEPREKAAAGSSKDPAACSHNPSPGSDLKEEKQQQLDPNNPAANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMNKEKGNKGD

Target ORF information:

RefSeq Version	XM_017837693.1
Organism	Lepidothrix coronata(blue-crowned manakin)
Definition	Lepidothrix coronata homeobox D9 (HOXD9), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017837693.1

ORF Insert Sequence:

ATGTCGTCTA GTGGCACCAT AAGTAACTAT TATGTCGATT CTCTCATAGG CCATGAAAGC 
GAAGAAGTTT ACGGGAGTAG ATTCGTCCAG GGAGGTCACA GTGCGACCTC CAGGCCATCA 
GGTGTTGCAG AGAGTTCAGA TTTTTCCTCT TGTAGCTTTG CACCAAAATC CACGGTGTTC 
TCCACCTCCT GGTCCGCGGT TCACCCTCAG CCGTCTGCGG CAATGACCGG GATCTACCAC 
CCCTACATGC ACCAGCCCCA TTTAGGGGCA GCCGACGCTG GCCGCTACGT GCGCTCCTGG 
ATTGAGCCCT TCCCGGGCTT CCCGGGTGGC GGCGGCGGAG GCAGCAGCAG CAGCGGCGGC 
TCTGCGTCCA GCTCCGGCTC CTCCAACGGG CGCCACTACG GGATAAAGCC GGAGACGGGA 
GCAGCCGCCT CCTCGTCTTC CTCCTCCTCT TCCTCCTCCT CCAAAAGGAC TGAGTGCTCC 
TCATCTCGGG AGTCCCAGGG GATCGGTGTG CCCGAGTACA CGTGCAGCTC CTTCCTCCAG 
GAGCCCCGGG AGAAAGCGGC TGCCGGCAGC TCCAAGGACC CCGCCGCTTG CAGTCACAAC 
CCCAGCCCGG GCAGCGATCT GAAGGAGGAG AAACAGCAGC AACTTGACCC AAATAACCCT 
GCAGCAAACT GGATCCACGC TCGTTCAACG AGGAAAAAGC GTTGTCCCTA CACAAAGTAT 
CAAACTCTGG AACTGGAAAA GGAATTTCTC TTTAACATGT ACCTCACCCG AGACCGCCGT 
TACGAAGTAG CTAGGATTTT AAACCTCACA GAGAGACAGG TCAAAATCTG GTTTCAGAAC 
AGAAGAATGA AAATGAAAAA GATGAACAAG GAGAAAGGCA ATAAAGGAGA CTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

HOXD9 ( XM_017837703.1 ) cDNA ORF clone, Lepidothrix coronata(blue-crowned manakin) -> XP_017693192.1 Lepidothrix coronata homeobox D9 (HOXD9), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OLe50365
Clone ID Related Accession (Same CDS sequence)	XM_017837703.1
Accession Version	XM_017837703.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 849bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-08-10
Organism	Lepidothrix coronata(blue-crowned manakin)
Product	homeobox protein Hox-D9 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_016690187.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Lepidothrix coronata Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGGCCATG AAAGCGAAGA AGTTTACGGG AGTAGATTCG TCCAGGGAGG TCACAGTGCG 
ACCTCCAGGC CATCAGGTGT TGCAGAGAGT TCAGATTTTT CCTCTTGTAG CTTTGCACCA 
AAATCCACGG TGTTCTCCAC CTCCTGGTCC GCGGTTCACC CTCAGCCGTC TGCGGCAATG 
ACCGGGATCT ACCACCCCTA CATGCACCAG CCCCATTTAG GGGCAGCCGA CGCTGGCCGC 
TACGTGCGCT CCTGGATTGA GCCCTTCCCG GGCTTCCCGG GTGGCGGCGG CGGAGGCAGC 
AGCAGCAGCG GCGGCTCTGC GTCCAGCTCC GGCTCCTCCA ACGGGCGCCA CTACGGGATA 
AAGCCGGAGA CGGGAGCAGC CGCCTCCTCG TCTTCCTCCT CCTCTTCCTC CTCCTCCAAA 
AGGACTGAGT GCTCCTCATC TCGGGAGTCC CAGGGGATCG GTGTGCCCGA GTACACGTGC 
AGCTCCTTCC TCCAGGAGCC CCGGGAGAAA GCGGCTGCCG GCAGCTCCAA GGACCCCGCC 
GCTTGCAGTC ACAACCCCAG CCCGGGCAGC GATCTGAAGG AGGAGAAACA GCAGCAACTT 
GACCCAAATA ACCCTGCAGC AAACTGGATC CACGCTCGTT CAACGAGGAA AAAGCGTTGT 
CCCTACACAA AGTATCAAAC TCTGGAACTG GAAAAGGAAT TTCTCTTTAA CATGTACCTC 
ACCCGAGACC GCCGTTACGA AGTAGCTAGG ATTTTAAACC TCACAGAGAG ACAGGTCAAA 
ATCTGGTTTC AGAACAGAAG AATGAAAATG AAAAAGATGA ACAAGGAGAA AGGCAATAAA 
GGAGACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017693192.1
CDS	148..996
Translation	MGHESEEVYGSRFVQGGHSATSRPSGVAESSDFSSCSFAPKSTVFSTSWSAVHPQPSAAMTGIYHPYMHQPHLGAADAGRYVRSWIEPFPGFPGGGGGGSSSSGGSASSSGSSNGRHYGIKPETGAAASSSSSSSSSSSKRTECSSSRESQGIGVPEYTCSSFLQEPREKAAAGSSKDPAACSHNPSPGSDLKEEKQQQLDPNNPAANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMNKEKGNKGD

Target ORF information:

RefSeq Version	XM_017837703.1
Organism	Lepidothrix coronata(blue-crowned manakin)
Definition	Lepidothrix coronata homeobox D9 (HOXD9), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017837703.1

ORF Insert Sequence:

ATGGGCCATG AAAGCGAAGA AGTTTACGGG AGTAGATTCG TCCAGGGAGG TCACAGTGCG 
ACCTCCAGGC CATCAGGTGT TGCAGAGAGT TCAGATTTTT CCTCTTGTAG CTTTGCACCA 
AAATCCACGG TGTTCTCCAC CTCCTGGTCC GCGGTTCACC CTCAGCCGTC TGCGGCAATG 
ACCGGGATCT ACCACCCCTA CATGCACCAG CCCCATTTAG GGGCAGCCGA CGCTGGCCGC 
TACGTGCGCT CCTGGATTGA GCCCTTCCCG GGCTTCCCGG GTGGCGGCGG CGGAGGCAGC 
AGCAGCAGCG GCGGCTCTGC GTCCAGCTCC GGCTCCTCCA ACGGGCGCCA CTACGGGATA 
AAGCCGGAGA CGGGAGCAGC CGCCTCCTCG TCTTCCTCCT CCTCTTCCTC CTCCTCCAAA 
AGGACTGAGT GCTCCTCATC TCGGGAGTCC CAGGGGATCG GTGTGCCCGA GTACACGTGC 
AGCTCCTTCC TCCAGGAGCC CCGGGAGAAA GCGGCTGCCG GCAGCTCCAA GGACCCCGCC 
GCTTGCAGTC ACAACCCCAG CCCGGGCAGC GATCTGAAGG AGGAGAAACA GCAGCAACTT 
GACCCAAATA ACCCTGCAGC AAACTGGATC CACGCTCGTT CAACGAGGAA AAAGCGTTGT 
CCCTACACAA AGTATCAAAC TCTGGAACTG GAAAAGGAAT TTCTCTTTAA CATGTACCTC 
ACCCGAGACC GCCGTTACGA AGTAGCTAGG ATTTTAAACC TCACAGAGAG ACAGGTCAAA 
ATCTGGTTTC AGAACAGAAG AATGAAAATG AAAAAGATGA ACAAGGAGAA AGGCAATAAA 
GGAGACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.