LOC108893516 cDNA ORF clone, Lates calcarifer(barramundi perch)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC108893516
Entrez Gene ID	108893516
Full Name	interferon regulatory factor 1-like
Gene Type	protein-coding
Organism	Lates calcarifer(barramundi perch)

mRNA and Protein(s)

mRNA	Protein	Name
XM_018691610.1	XP_018547126.1	interferon regulatory factor 1-like isoform X2
XM_018691609.1	XP_018547125.1	interferon regulatory factor 1-like isoform X1

Pathways from BioSystems
Gene Ontology

The following LOC108893516 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC108893516 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLa63529	XM_018691609.1 Latest version!	Lates calcarifer interferon regulatory factor 1-like (LOC108893516), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00
OLa63530	XM_018691610.1 Latest version!	Lates calcarifer interferon regulatory factor 1-like (LOC108893516), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC108893516 ( XM_018691609.1 ) cDNA ORF clone, Lates calcarifer(barramundi perch) -> XP_018547125.1 Lates calcarifer interferon regulatory factor 1-like (LOC108893516), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OLa63529
Clone ID Related Accession (Same CDS sequence)	XM_018691609.1
Accession Version	XM_018691609.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 873bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-10-13
Organism	Lates calcarifer(barramundi perch)
Product	interferon regulatory factor 1-like isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017365383.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Lates calcarifer Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCCGTGT CAAGGATGAG GATGAGGCCG TGGCTGGAGA GGATGATCGA CTCTAACACC 
ATCTCTGGAT TGGCTTGGGT GGACAAGGAT AAGACCATGT TCTCGATTCC CTGGAAGCAC 
GCAGCTCGGC ACGGCTGGGA GATGGACAAG GACGCGTGCC TGTTCAAGCA GTGGGCCATC 
CACACAGGGA AATACGTGGA GGGCCAGACC TCTGACCCCA AGACATGGAA AGCCAACTTC 
CGCTGTGCGA TGAACTCACT GCCCGACATC GAAGAGGTGA AAGACAGGAG CATCAACAAG 
GGCCACCAAG CCATGCGCGT CTTCAGGATG CTGCCTGCCA CCCCAAAATC TAGAGATAAA 
CGAAGCAAAG CAAAGGAGGC AAAGCAAAGG AACAAGGGCC CAGTGGTAAA GATGGAGGAA 
GACACAGACT CCAGTGATAC TCAGTCCACA CTGTCAGAGG AGATCCTGTC TACTCAGGAA 
AACAGAGTCG ACAGCACGGT GCACACAGAT CAGCAAGATT TCCCCTTGAT TGCTTATTCC 
GATGTTCCTG ACTATTCTTC GTCGGTGGAG ATTGAGAATG ACAACTTTTC AGCCTTCTGC 
CAGAGATTTG AAGTTTCACC GGATCACAGC CCTGAGTACG ACGACATTAT TGAGATTTGC 
CAGCAACTGG AGAAAGAAAC ACACTGGCTG TCAAGCAGTT TAGACGGCAC GGGGTTCCTG 
AGCAATGAAG CATGCACCAG TCCAGGGAGC CAGTGGAGTG ACTCTTCCTC AGCCGACGAA 
CTAGATGAAC TGCCACAGTA CACAACTCTG GTCTCAGACT TCACAAGCCA CACAGACAAC 
CTCTGGAAAC CCTTTTACCC TCCCATGCTC TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_018547125.1
CDS	169..1041
Translation	MPVSRMRMRPWLERMIDSNTISGLAWVDKDKTMFSIPWKHAARHGWEMDKDACLFKQWAIHTGKYVEGQTSDPKTWKANFRCAMNSLPDIEEVKDRSINKGHQAMRVFRMLPATPKSRDKRSKAKEAKQRNKGPVVKMEEDTDSSDTQSTLSEEILSTQENRVDSTVHTDQQDFPLIAYSDVPDYSSSVEIENDNFSAFCQRFEVSPDHSPEYDDIIEICQQLEKETHWLSSSLDGTGFLSNEACTSPGSQWSDSSSADELDELPQYTTLVSDFTSHTDNLWKPFYPPML

Target ORF information:

RefSeq Version	XM_018691609.1
Organism	Lates calcarifer(barramundi perch)
Definition	Lates calcarifer interferon regulatory factor 1-like (LOC108893516), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_018691609.1

ORF Insert Sequence:

ATGCCCGTGT CAAGGATGAG GATGAGGCCG TGGCTGGAGA GGATGATCGA CTCTAACACC 
ATCTCTGGAT TGGCTTGGGT GGACAAGGAT AAGACCATGT TCTCGATTCC CTGGAAGCAC 
GCAGCTCGGC ACGGCTGGGA GATGGACAAG GACGCGTGCC TGTTCAAGCA GTGGGCCATC 
CACACAGGGA AATACGTGGA GGGCCAGACC TCTGACCCCA AGACATGGAA AGCCAACTTC 
CGCTGTGCGA TGAACTCACT GCCCGACATC GAAGAGGTGA AAGACAGGAG CATCAACAAG 
GGCCACCAAG CCATGCGCGT CTTCAGGATG CTGCCTGCCA CCCCAAAATC TAGAGATAAA 
CGAAGCAAAG CAAAGGAGGC AAAGCAAAGG AACAAGGGCC CAGTGGTAAA GATGGAGGAA 
GACACAGACT CCAGTGATAC TCAGTCCACA CTGTCAGAGG AGATCCTGTC TACTCAGGAA 
AACAGAGTCG ACAGCACGGT GCACACAGAT CAGCAAGATT TCCCCTTGAT TGCTTATTCC 
GATGTTCCTG ACTATTCTTC GTCGGTGGAG ATTGAGAATG ACAACTTTTC AGCCTTCTGC 
CAGAGATTTG AAGTTTCACC GGATCACAGC CCTGAGTACG ACGACATTAT TGAGATTTGC 
CAGCAACTGG AGAAAGAAAC ACACTGGCTG TCAAGCAGTT TAGACGGCAC GGGGTTCCTG 
AGCAATGAAG CATGCACCAG TCCAGGGAGC CAGTGGAGTG ACTCTTCCTC AGCCGACGAA 
CTAGATGAAC TGCCACAGTA CACAACTCTG GTCTCAGACT TCACAAGCCA CACAGACAAC 
CTCTGGAAAC CCTTTTACCC TCCCATGCTC TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC108893516 ( XM_018691610.1 ) cDNA ORF clone, Lates calcarifer(barramundi perch) -> XP_018547126.1 Lates calcarifer interferon regulatory factor 1-like (LOC108893516), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OLa63530
Clone ID Related Accession (Same CDS sequence)	XM_018691610.1
Accession Version	XM_018691610.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 666bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-10-13
Organism	Lates calcarifer(barramundi perch)
Product	interferon regulatory factor 1-like isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017365383.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Lates calcarifer Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCCGTGT CAAGGATGAG GATGAGGCCG TGGCTGGAGA GGATGATCGA CTCTAACACC 
ATCTCTGGAT TGGCTTGGGT GGACAAGGAT AAGACCATGT TCTCGATTCC CTGGAAGCAC 
GCAGCTCGGC ACGGCTGGGA GATGGACAAG GACGCGTGCC TGTTCAAGCA GTGGGCCATC 
CACACAGGGA AATACGTGGA GGGCCAGACC TCTGACCCCA AGACATGGAA AGCCAACTTC 
CGCTGTGCGA TGAACTCACT GCCCGACATC GAAGAGGTGA AAGACAGGAG CATCAACAAG 
GGCCACCAAG CCATGCGCGT CTTCAGGATG CTGCCTGCCA CCCCAAAATC TAGAGATAAA 
CGAAGCAAAG CAAAGGAGGC AAAGCAAAGG AACAAGGGCC CAGTGGTAAA GATGGAGGAA 
GACACAGACT CCAGTGATAC TCAGTCCACA CTGTCAGAGG AGATCCTGTC TACTCAGGAA 
AACAGAGTCG ACAGCACGGT GCACACAGAT CAGCAAGATT TCCCCTTGAT TGCTTATTCC 
GATGTTCCTG ACTATTCTTC GTCGGTGGAG ATTGAGAATG ACAACTTTTC AGCCTTCTGC 
CAGAGATTTG AAGTTTCACC GGATCACAGC CCTGAGTACG ACGACATTAT TGAGCCGACG 
AACTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_018547126.1
CDS	169..834
Translation	MPVSRMRMRPWLERMIDSNTISGLAWVDKDKTMFSIPWKHAARHGWEMDKDACLFKQWAIHTGKYVEGQTSDPKTWKANFRCAMNSLPDIEEVKDRSINKGHQAMRVFRMLPATPKSRDKRSKAKEAKQRNKGPVVKMEEDTDSSDTQSTLSEEILSTQENRVDSTVHTDQQDFPLIAYSDVPDYSSSVEIENDNFSAFCQRFEVSPDHSPEYDDIIEPTN

Target ORF information:

RefSeq Version	XM_018691610.1
Organism	Lates calcarifer(barramundi perch)
Definition	Lates calcarifer interferon regulatory factor 1-like (LOC108893516), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_018691610.1

ORF Insert Sequence:

ATGCCCGTGT CAAGGATGAG GATGAGGCCG TGGCTGGAGA GGATGATCGA CTCTAACACC 
ATCTCTGGAT TGGCTTGGGT GGACAAGGAT AAGACCATGT TCTCGATTCC CTGGAAGCAC 
GCAGCTCGGC ACGGCTGGGA GATGGACAAG GACGCGTGCC TGTTCAAGCA GTGGGCCATC 
CACACAGGGA AATACGTGGA GGGCCAGACC TCTGACCCCA AGACATGGAA AGCCAACTTC 
CGCTGTGCGA TGAACTCACT GCCCGACATC GAAGAGGTGA AAGACAGGAG CATCAACAAG 
GGCCACCAAG CCATGCGCGT CTTCAGGATG CTGCCTGCCA CCCCAAAATC TAGAGATAAA 
CGAAGCAAAG CAAAGGAGGC AAAGCAAAGG AACAAGGGCC CAGTGGTAAA GATGGAGGAA 
GACACAGACT CCAGTGATAC TCAGTCCACA CTGTCAGAGG AGATCCTGTC TACTCAGGAA 
AACAGAGTCG ACAGCACGGT GCACACAGAT CAGCAAGATT TCCCCTTGAT TGCTTATTCC 
GATGTTCCTG ACTATTCTTC GTCGGTGGAG ATTGAGAATG ACAACTTTTC AGCCTTCTGC 
CAGAGATTTG AAGTTTCACC GGATCACAGC CCTGAGTACG ACGACATTAT TGAGCCGACG 
AACTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.