LOC108272839 cDNA ORF clone, Ictalurus punctatus(channel catfish)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC108272839
Entrez Gene ID	108272839
Full Name	thyrotroph embryonic factor-like
Synonyms	TEF
Gene Type	protein-coding
Organism	Ictalurus punctatus(channel catfish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_017481635.1	XP_017337124.1	thyrotroph embryonic factor-like isoform X1
XM_017481636.1	XP_017337125.1	thyrotroph embryonic factor-like isoform X2

Pathways from BioSystems
Gene Ontology

The following LOC108272839 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC108272839 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OIc05789	XM_017481635.1 Latest version!	Ictalurus punctatus thyrotroph embryonic factor-like (LOC108272839), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00
OIc05790	XM_017481636.1 Latest version!	Ictalurus punctatus thyrotroph embryonic factor-like (LOC108272839), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC108272839 ( XM_017481635.1 ) cDNA ORF clone, Ictalurus punctatus(channel catfish) -> XP_017337124.1 Ictalurus punctatus thyrotroph embryonic factor-like (LOC108272839), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OIc05789
Clone ID Related Accession (Same CDS sequence)	XM_017481635.1
Accession Version	XM_017481635.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 954bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-05
Organism	Ictalurus punctatus(channel catfish)
Product	thyrotroph embryonic factor-like isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030427.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ictalurus punctatus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCCGGAC AGACGACGGT TACTCTCTCC GTTGCTCCTA GCAACAGCAG CCCGCAAAAG 
CCTTTGCCTT TAGTTTTGAA GAAGATAATG GAGATCCTAC CGCCTAACAT ACTCGACGAC 
GGGGATGATG AGATAGAGAA GGAGAAGCTG AGCTCCATCG GAGACGGGGA GTCTTGCGGA 
GATGGAGGCG GTGGAGGATC CGGGGGCGCG GGCGGAGTTT CGGCCTCGCT CACTCCCACG 
ATTTGGGACA AGACCATCCC GTACGACGGC GAGAACTTCC ACCTGGAGTA CATGGACCTG 
GACGAGTTCC TGCTGGAGAA TCAAATTCCT GCAGCTCTGG AGGAGGAGCT GCACAAGAGC 
CTGGAGCAGG AGGCCCAAGG TTCCCCCGCA GTCCCGGAAG TCTCGGCGGC CGTCCCACAG 
GTGCCTGGGG AAACAGAAAA AGCTGCAGAA GTGCAGAAGA TAAAAGGGGA GGACGAGAGT 
GAAATAGCTG AGGCGCAGGT GATGGAGAAT GCCACAGAGC CCGAAGATAA GCCAGAGCGC 
GCCACTCCGT CTCCAGTCAA CCCAGAGGAG ATCGAGGTGA GTGTGAATTT CCAGCCAGAC 
CCAGCGGACC TGGTGCTGTC CAGCATTCCG GGAGGAGAGC TGTTCAACCC GCGCAAACAC 
CGCTTCAGCG AGGACGAGCT CAAACCGCAG CCCATGATCA AGAAGGCCAA GAAGGTGTTC 
ATTCCCGAAG ATGCCAAGGA CGAAAGGTAC TGGTCGAGGA GGAAGAAGAA CAACCTGGCG 
GCGAAGCGTT CGCGGGACGC GCGGCGTGTA AAGGAGAACC AGATCGCCGT GCGCGCCAAT 
TTCCTGGAGC GGGAAAACGC GGCACTGCGT CAGGAAGTGG CCGAGCTCAG GAAGACCTGC 
AGCCGCTGCA AGAAGATCAT GGCTCTCTAC GAGGCCAAGT ACGGCCCTCT GTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017337124.1
CDS	197..1150
Translation	MPGQTTVTLSVAPSNSSPQKPLPLVLKKIMEILPPNILDDGDDEIEKEKLSSIGDGESCGDGGGGGSGGAGGVSASLTPTIWDKTIPYDGENFHLEYMDLDEFLLENQIPAALEEELHKSLEQEAQGSPAVPEVSAAVPQVPGETEKAAEVQKIKGEDESEIAEAQVMENATEPEDKPERATPSPVNPEEIEVSVNFQPDPADLVLSSIPGGELFNPRKHRFSEDELKPQPMIKKAKKVFIPEDAKDERYWSRRKKNNLAAKRSRDARRVKENQIAVRANFLERENAALRQEVAELRKTCSRCKKIMALYEAKYGPL

Target ORF information:

RefSeq Version	XM_017481635.1
Organism	Ictalurus punctatus(channel catfish)
Definition	Ictalurus punctatus thyrotroph embryonic factor-like (LOC108272839), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017481635.1

ORF Insert Sequence:

ATGCCCGGAC AGACGACGGT TACTCTCTCC GTTGCTCCTA GCAACAGCAG CCCGCAAAAG 
CCTTTGCCTT TAGTTTTGAA GAAGATAATG GAGATCCTAC CGCCTAACAT ACTCGACGAC 
GGGGATGATG AGATAGAGAA GGAGAAGCTG AGCTCCATCG GAGACGGGGA GTCTTGCGGA 
GATGGAGGCG GTGGAGGATC CGGGGGCGCG GGCGGAGTTT CGGCCTCGCT CACTCCCACG 
ATTTGGGACA AGACCATCCC GTACGACGGC GAGAACTTCC ACCTGGAGTA CATGGACCTG 
GACGAGTTCC TGCTGGAGAA TCAAATTCCT GCAGCTCTGG AGGAGGAGCT GCACAAGAGC 
CTGGAGCAGG AGGCCCAAGG TTCCCCCGCA GTCCCGGAAG TCTCGGCGGC CGTCCCACAG 
GTGCCTGGGG AAACAGAAAA AGCTGCAGAA GTGCAGAAGA TAAAAGGGGA GGACGAGAGT 
GAAATAGCTG AGGCGCAGGT GATGGAGAAT GCCACAGAGC CCGAAGATAA GCCAGAGCGC 
GCCACTCCGT CTCCAGTCAA CCCAGAGGAG ATCGAGGTGA GTGTGAATTT CCAGCCAGAC 
CCAGCGGACC TGGTGCTGTC CAGCATTCCG GGAGGAGAGC TGTTCAACCC GCGCAAACAC 
CGCTTCAGCG AGGACGAGCT CAAACCGCAG CCCATGATCA AGAAGGCCAA GAAGGTGTTC 
ATTCCCGAAG ATGCCAAGGA CGAAAGGTAC TGGTCGAGGA GGAAGAAGAA CAACCTGGCG 
GCGAAGCGTT CGCGGGACGC GCGGCGTGTA AAGGAGAACC AGATCGCCGT GCGCGCCAAT 
TTCCTGGAGC GGGAAAACGC GGCACTGCGT CAGGAAGTGG CCGAGCTCAG GAAGACCTGC 
AGCCGCTGCA AGAAGATCAT GGCTCTCTAC GAGGCCAAGT ACGGCCCTCT GTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC108272839 ( XM_017481636.1 ) cDNA ORF clone, Ictalurus punctatus(channel catfish) -> XP_017337125.1 Ictalurus punctatus thyrotroph embryonic factor-like (LOC108272839), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OIc05790
Clone ID Related Accession (Same CDS sequence)	XM_017481636.1
Accession Version	XM_017481636.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 900bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-05
Organism	Ictalurus punctatus(channel catfish)
Product	thyrotroph embryonic factor-like isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030427.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ictalurus punctatus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTTTGCTC TCGGGGATCT GGGAGACATC GAGCAGGTTT ATCGAACTTT CCTGCAGCAC 
CGGAGTGATG AAGGGGAGAT AGAGAAGGAG AAGCTGAGCT CCATCGGAGA CGGGGAGTCT 
TGCGGAGATG GAGGCGGTGG AGGATCCGGG GGCGCGGGCG GAGTTTCGGC CTCGCTCACT 
CCCACGATTT GGGACAAGAC CATCCCGTAC GACGGCGAGA ACTTCCACCT GGAGTACATG 
GACCTGGACG AGTTCCTGCT GGAGAATCAA ATTCCTGCAG CTCTGGAGGA GGAGCTGCAC 
AAGAGCCTGG AGCAGGAGGC CCAAGGTTCC CCCGCAGTCC CGGAAGTCTC GGCGGCCGTC 
CCACAGGTGC CTGGGGAAAC AGAAAAAGCT GCAGAAGTGC AGAAGATAAA AGGGGAGGAC 
GAGAGTGAAA TAGCTGAGGC GCAGGTGATG GAGAATGCCA CAGAGCCCGA AGATAAGCCA 
GAGCGCGCCA CTCCGTCTCC AGTCAACCCA GAGGAGATCG AGGTGAGTGT GAATTTCCAG 
CCAGACCCAG CGGACCTGGT GCTGTCCAGC ATTCCGGGAG GAGAGCTGTT CAACCCGCGC 
AAACACCGCT TCAGCGAGGA CGAGCTCAAA CCGCAGCCCA TGATCAAGAA GGCCAAGAAG 
GTGTTCATTC CCGAAGATGC CAAGGACGAA AGGTACTGGT CGAGGAGGAA GAAGAACAAC 
CTGGCGGCGA AGCGTTCGCG GGACGCGCGG CGTGTAAAGG AGAACCAGAT CGCCGTGCGC 
GCCAATTTCC TGGAGCGGGA AAACGCGGCA CTGCGTCAGG AAGTGGCCGA GCTCAGGAAG 
ACCTGCAGCC GCTGCAAGAA GATCATGGCT CTCTACGAGG CCAAGTACGG CCCTCTGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017337125.1
CDS	88..987
Translation	MFALGDLGDIEQVYRTFLQHRSDEGEIEKEKLSSIGDGESCGDGGGGGSGGAGGVSASLTPTIWDKTIPYDGENFHLEYMDLDEFLLENQIPAALEEELHKSLEQEAQGSPAVPEVSAAVPQVPGETEKAAEVQKIKGEDESEIAEAQVMENATEPEDKPERATPSPVNPEEIEVSVNFQPDPADLVLSSIPGGELFNPRKHRFSEDELKPQPMIKKAKKVFIPEDAKDERYWSRRKKNNLAAKRSRDARRVKENQIAVRANFLERENAALRQEVAELRKTCSRCKKIMALYEAKYGPL

Target ORF information:

RefSeq Version	XM_017481636.1
Organism	Ictalurus punctatus(channel catfish)
Definition	Ictalurus punctatus thyrotroph embryonic factor-like (LOC108272839), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017481636.1

ORF Insert Sequence:

ATGTTTGCTC TCGGGGATCT GGGAGACATC GAGCAGGTTT ATCGAACTTT CCTGCAGCAC 
CGGAGTGATG AAGGGGAGAT AGAGAAGGAG AAGCTGAGCT CCATCGGAGA CGGGGAGTCT 
TGCGGAGATG GAGGCGGTGG AGGATCCGGG GGCGCGGGCG GAGTTTCGGC CTCGCTCACT 
CCCACGATTT GGGACAAGAC CATCCCGTAC GACGGCGAGA ACTTCCACCT GGAGTACATG 
GACCTGGACG AGTTCCTGCT GGAGAATCAA ATTCCTGCAG CTCTGGAGGA GGAGCTGCAC 
AAGAGCCTGG AGCAGGAGGC CCAAGGTTCC CCCGCAGTCC CGGAAGTCTC GGCGGCCGTC 
CCACAGGTGC CTGGGGAAAC AGAAAAAGCT GCAGAAGTGC AGAAGATAAA AGGGGAGGAC 
GAGAGTGAAA TAGCTGAGGC GCAGGTGATG GAGAATGCCA CAGAGCCCGA AGATAAGCCA 
GAGCGCGCCA CTCCGTCTCC AGTCAACCCA GAGGAGATCG AGGTGAGTGT GAATTTCCAG 
CCAGACCCAG CGGACCTGGT GCTGTCCAGC ATTCCGGGAG GAGAGCTGTT CAACCCGCGC 
AAACACCGCT TCAGCGAGGA CGAGCTCAAA CCGCAGCCCA TGATCAAGAA GGCCAAGAAG 
GTGTTCATTC CCGAAGATGC CAAGGACGAA AGGTACTGGT CGAGGAGGAA GAAGAACAAC 
CTGGCGGCGA AGCGTTCGCG GGACGCGCGG CGTGTAAAGG AGAACCAGAT CGCCGTGCGC 
GCCAATTTCC TGGAGCGGGA AAACGCGGCA CTGCGTCAGG AAGTGGCCGA GCTCAGGAAG 
ACCTGCAGCC GCTGCAAGAA GATCATGGCT CTCTACGAGG CCAAGTACGG CCCTCTGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.