| Gene Symbol | LOC110250228 |
| Entrez Gene ID | 110250228 |
| Full Name | UPF0676 protein C1494.01-like |
| Gene Type | protein-coding |
| Organism | Exaiptasia pallida |
ORF » Species Summary » Exaiptasia pallida » LOC110250228 cDNA ORF clone
| Gene Symbol | LOC110250228 |
| Entrez Gene ID | 110250228 |
| Full Name | UPF0676 protein C1494.01-like |
| Gene Type | protein-coding |
| Organism | Exaiptasia pallida |
| mRNA | Protein | Name |
|---|---|---|
| XM_021056837.1 | XP_020912496.1 | UPF0676 protein C1494.01-like |
| XM_021056837.2 | XP_020912496.1 | 2-oxoglutarate-dependent dioxygenase ecdK |
Developing the anemone Aiptasia as a tractable model for cnidarian-dinoflagellate symbiosis: the transcriptome of aposymbiotic A. pallida.
Lehnert EM, Burriesci MS, Pringle JR
BMC genomics13271(2012 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC110250228 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC110250228 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OEx88683 | |
| Clone ID Related Accession (Same CDS sequence) | XM_021056837.1 , XM_021056837.2 | |
| Accession Version | XM_021056837.1 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 999bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-11 | |
| Organism | Exaiptasia pallida | |
| Product | UPF0676 protein C1494.01-like | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_018388019.1) and transcript sequence (JV100887.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Exaiptasia pallida Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 111 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## | |
1 | ATGGCGGCTG TCGAGGCCGA AATGGTCTCT GGCATTCCTG TAGTAGATTT TACTGCATTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020912496.1 |
| CDS | 133..1131 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021056837.1 |
1 | ATGGCGGCTG TCGAGGCCGA AATGGTCTCT GGCATTCCTG TAGTAGATTT TACTGCATTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OEx88683 | |
| Clone ID Related Accession (Same CDS sequence) | XM_021056837.1 , XM_021056837.2 | |
| Accession Version | XM_021056837.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 999bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-04-16 | |
| Organism | Exaiptasia pallida | |
| Product | 2-oxoglutarate-dependent dioxygenase ecdK | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_018388019.1) and transcript sequence (JV100887.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 17, 2019 this sequence version replaced XM_021056837.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Exaiptasia pallida Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 111 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## | |
1 | ATGGCGGCTG TCGAGGCCGA AATGGTCTCT GGCATTCCTG TAGTAGATTT TACTGCATTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020912496.1 |
| CDS | 39..1037 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021056837.2 |
1 | ATGGCGGCTG TCGAGGCCGA AATGGTCTCT GGCATTCCTG TAGTAGATTT TACTGCATTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Developing the anemone Aiptasia as a tractable model for cnidarian-dinoflagellate symbiosis: the transcriptome of aposymbiotic A. pallida. |