c1qtnf5 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	c1qtnf5
Entrez Gene ID	555815
Full Name	C1q and TNF related 5
Synonyms	wu:fb02c10,wu:fb02f05,zgc:112378
General protein information	Preferred Names C1q and TNF related 5 Names complement C1q tumor necrosis factor-related protein 5 C1q and tumor necrosis factor related protein 5
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001029953.1	NP_001025124.1	complement C1q tumor necrosis factor-related protein 5 precursor

Pathways from BioSystems

Homologies

Homo sapiens (human)	C1QTNF5	NP_056460.1
Canis lupus familiaris (dog)	C1QTNF5	XP_853180.3
Mus musculus (house mouse)	C1qtnf5	NP_001177242.1
	C1QTNF5	XP_001105035.2
Bos taurus (cattle)	C1QTNF5	NP_001092608.1
Rattus norvegicus (Norway rat)	C1qtnf5	NP_001012123.1
Danio rerio (zebrafish)	c1qtnf5	NP_001025124.1
Gallus gallus (chicken)	C1QTNF5	XP_001232467.2
Xenopus tropicalis (tropical clawed frog)	c1qtnf5	XP_002935065.2

Gene Ontology
Bibliography

Related articles in PubMed

Loss of Zebrafish Mfrp Causes Nanophthalmia, Hyperopia, and Accumulation of Subretinal Macrophages.
Collery RF, Volberding PJ, Bostrom JR, Link BA, Besharse JC
Investigative ophthalmology & visual science57(15)6805-6814(2016 12)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Dynamic gene expression by putative hair-cell progenitors during regeneration in the zebrafish lateral line.
Steiner AB, Kim T, Cabot V, Hudspeth AJ
Proceedings of the National Academy of Sciences of the United States of America111(14)E1393-401(2014 Apr)

Transcriptional signature of accessory cells in the lateral line, using the Tnk1bp1:EGFP transgenic zebrafish line.
Behra M, Gallardo VE, Bradsher J, Torrado A, Elkahloun A, Idol J, Sheehy J, Zonies S, Xu L, Shaw KM, Satou C, Higashijima S, Weinstein BM, Burgess SM
BMC developmental biology126(2012 Jan)

Characterization of C1q in teleosts: insight into the molecular and functional evolution of C1q family and classical pathway.
Hu YL, Pan XM, Xiang LX, Shao JZ
The Journal of biological chemistry285(37)28777-86(2010 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following c1qtnf5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the c1qtnf5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa33484	NM_001029953.1 Latest version!	Danio rerio C1q and TNF related 5 (c1qtnf5), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

c1qtnf5 ( NM_001029953.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001025124.1 Danio rerio C1q and TNF related 5 (c1qtnf5), mRNA.

Price & Availability↑

CloneID	ODa33484
Clone ID Related Accession (Same CDS sequence)	NM_001029953.1
Accession Version	NM_001029953.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 747bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	complement C1q tumor necrosis factor-related protein 5 precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC098626.1. On or before Jul 30, 2005 this sequence version replaced XM_677593.1, XM_701544.1. ##Evidence-Data-START## Transcript exon combination :: BC098626.1, BQ419058.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476801, SAMN01765705 [ECO:0000348] ##Evidence-Data-END##

ATGACATCTC TGCAGACATG GCCTCTCTCA TTGCTGCTTG TTTTTGCAGT ACATTGTTCG 
AATTCACTTG AAGATAACAA GATTCCCAGT TTGTGCACAG GAAGCCCAGG TATCCCAGGA 
TCCCCTGGGT TGCACGGGAG CCCCGGTCAG CCTGGCAGGG ATGGACGAGA TGGCCGTGAT 
GCTCAACCAG GAGAGAAAGG AGAAAGAGGG GAGAGCGGAG AACTAGGTCA ACCGGGCGTG 
AGGGGCCTCA CAGGAGACCG AGGGGATCCA GGAGAAAAAG GTGAGCGAGG AGCCCCAGGC 
GAGTGTGCAG TGGCCCCTAA ATCAGCCTTT AGCGCCAAAC TGTCAGAGGC TCGCACGACT 
CCATTGACTG TAGGTGACTC GGTGCGCTTC GACAAGGTCA TTTTGAACGA GCAGGGTGAC 
TACAATCCAG AAACCGGACG TTTCACCTGC AGAGTGCCAG GTGTTTATTA CTTTGCCGTT 
CACGCCACCG TCTACCGCTC CAGCTTGCAG TTTGACCTCA TGAAGAACGG GCACACCGTG 
GCTTCCTACT TTCAGATTTT TGGGAACTGG TCCAAACCAG CGTCACTGTC TGGAGGAACA 
CTAGTGCACT TGATTCCTGG TGATCAGGTT TGGGTGCAGA TGGCTCTGGG CGAGTACATC 
GGTTTTTACT CCAGCTCAAA GACAGACAGC ACGTTCACTG GTTTCCTAGT GTACTCAGAC 
TGGAAAAACT CTGCTGTTTT TGCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001025124.1
CDS	110..856
Translation	MTSLQTWPLSLLLVFAVHCSNSLEDNKIPSLCTGSPGIPGSPGLHGSPGQPGRDGRDGRDAQPGEKGERGESGELGQPGVRGLTGDRGDPGEKGERGAPGECAVAPKSAFSAKLSEARTTPLTVGDSVRFDKVILNEQGDYNPETGRFTCRVPGVYYFAVHATVYRSSLQFDLMKNGHTVASYFQIFGNWSKPASLSGGTLVHLIPGDQVWVQMALGEYIGFYSSSKTDSTFTGFLVYSDWKNSAVFA

Target ORF information:

RefSeq Version	NM_001029953.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio C1q and TNF related 5 (c1qtnf5), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001029953.1

ORF Insert Sequence:

ATGACATCTC TGCAGACATG GCCTCTCTCA TTGCTGCTTG TTTTTGCAGT ACATTGTTCG 
AATTCACTTG AAGATAACAA GATTCCCAGT TTGTGCACAG GAAGCCCAGG TATCCCAGGA 
TCCCCTGGGT TGCACGGGAG CCCCGGTCAG CCTGGCAGGG ATGGACGAGA TGGCCGTGAT 
GCTCAACCAG GAGAGAAAGG AGAAAGAGGG GAGAGCGGAG AACTAGGTCA ACCGGGCGTG 
AGGGGCCTCA CAGGAGACCG AGGGGATCCA GGAGAAAAAG GTGAGCGAGG AGCCCCAGGC 
GAGTGTGCAG TGGCCCCTAA ATCAGCCTTT AGCGCCAAAC TGTCAGAGGC TCGCACGACT 
CCATTGACTG TAGGTGACTC GGTGCGCTTC GACAAGGTCA TTTTGAACGA GCAGGGTGAC 
TACAATCCAG AAACCGGACG TTTCACCTGC AGAGTGCCAG GTGTTTATTA CTTTGCCGTT 
CACGCCACCG TCTACCGCTC CAGCTTGCAG TTTGACCTCA TGAAGAACGG GCACACCGTG 
GCTTCCTACT TTCAGATTTT TGGGAACTGG TCCAAACCAG CGTCACTGTC TGGAGGAACA 
CTAGTGCACT TGATTCCTGG TGATCAGGTT TGGGTGCAGA TGGCTCTGGG CGAGTACATC 
GGTTTTTACT CCAGCTCAAA GACAGACAGC ACGTTCACTG GTTTCCTAGT GTACTCAGAC 
TGGAAAAACT CTGCTGTTTT TGCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Loss of Zebrafish Mfrp Causes Nanophthalmia, Hyperopia, and Accumulation of Subretinal Macrophages.
Investigative ophthalmology & visual science57(15)6805-6814(2016 12)
Collery RF,Volberding PJ,Bostrom JR,Link BA,Besharse JC

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Dynamic gene expression by putative hair-cell progenitors during regeneration in the zebrafish lateral line.
Proceedings of the National Academy of Sciences of the United States of America111(14)E1393-401(2014 Apr)
Steiner AB,Kim T,Cabot V,Hudspeth AJ

Transcriptional signature of accessory cells in the lateral line, using the Tnk1bp1:EGFP transgenic zebrafish line.
BMC developmental biology126(2012 Jan)
Behra M,Gallardo VE,Bradsher J,Torrado A,Elkahloun A,Idol J,Sheehy J,Zonies S,Xu L,Shaw KM,Satou C,Higashijima S,Weinstein BM,Burgess SM

Characterization of C1q in teleosts: insight into the molecular and functional evolution of C1q family and classical pathway.
The Journal of biological chemistry285(37)28777-86(2010 Sep)
Hu YL,Pan XM,Xiang LX,Shao JZ