fcf1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	fcf1
Entrez Gene ID	550264
Full Name	FCF1 rRNA-processing protein
Synonyms	zgc:110288
General protein information	Preferred Names FCF1 rRNA-processing protein Names rRNA-processing protein FCF1 homolog FCF1 small subunit
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001017601.1	NP_001017601.1	rRNA-processing protein FCF1 homolog

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	FCF1	XP_003314465.1
Caenorhabditis elegans (roundworm)	F30A10.9	NP_492523.1
Kluyveromyces lactis	KLLA0A07018g	XP_451311.1
Oryza sativa (rice)	Os06g0158600	NP_001056867.1
Gallus gallus (chicken)	FCF1	XP_421270.1
Danio rerio (zebrafish)	fcf1	NP_001017601.1
Saccharomyces cerevisiae (baker's yeast)	FCF1	NP_010626.1
Arabidopsis thaliana (thale cress)	AT2G46230	NP_566068.1
Canis lupus familiaris (dog)	FCF1	XP_537508.2
Drosophila melanogaster (fruit fly)	Bka	NP_524867.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP009504	XP_310192.3
Eremothecium gossypii	AGOS_AEL102W	NP_984759.1
Schizosaccharomyces pombe (fission yeast)	SPBC32H8.04c	NP_595610.1
Magnaporthe oryzae (rice blast fungus)	MGG_08302	XP_003715775.1
Xenopus tropicalis (tropical clawed frog)	fcf1	NP_001004999.1
Neurospora crassa	NCU04159	XP_961315.1
Homo sapiens (human)	FCF1	NP_057046.1
	FCF1	XP_001088448.1
Bos taurus (cattle)	FCF1	NP_001032529.1
Mus musculus (house mouse)	Fcf1	NP_082908.2
Rattus norvegicus (Norway rat)	Fcf1	NP_001037700.1

Gene Ontology
Bibliography

Related articles in PubMed

Spatio-temporal regulation of Wnt and retinoic acid signaling by tbx16/spadetail during zebrafish mesoderm differentiation.
Mueller RL, Huang C, Ho RK
BMC genomics11492(2010 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following fcf1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the fcf1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa03049	NM_001017601.1 Latest version!	Danio rerio FCF1 rRNA-processing protein (fcf1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

fcf1 ( NM_001017601.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001017601.1 Danio rerio FCF1 rRNA-processing protein (fcf1), mRNA.

Price & Availability↑

CloneID	ODa03049
Clone ID Related Accession (Same CDS sequence)	NM_001017601.1
Accession Version	NM_001017601.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 597bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-07-02
Organism	Danio rerio(zebrafish)
Product	rRNA-processing protein FCF1 homolog
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC092852.1. ##Evidence-Data-START## Transcript exon combination :: BC092852.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476757, SAMEA4476774 [ECO:0000348] ##Evidence-Data-END##

ATGGGAAAAC AGAAGAAACA GAAAAAATAT GCGACCATGA AAAGAATGAT CAGTCTGAAG 
GACCAGAGGA TAAAAGAAAA AGACAGAGCA AAAACGCAGA AGAAGAAGAA AGAAGATCCC 
TCGGCCATTA AAGAACAAGA AATAGCAAAG TACCCCTCTT GTCTCTTCTT TCAATACAAC 
ACCCAGCTTG GACCTCCGTA TTACATCCTG GTTGATACCA ACTTCATCAA CTTCTCTATT 
AAGGCCAAAT TAGATGTTGT CCAGTCGATG ATGGACTGCC TCTATGCTAA ATGTGTTCCT 
TGCATAACAG ACTGTGTGAT GGCTGAGCTG GAGAAATTAG GCATGAAGTA TCGAGTGGCT 
TTGCGGATTG CCAAAGATCC TCGATTCGAT CGATTGCCTT GTTCACACAA AGGAACATAT 
GCGGATGACT GCTTGGTGCA GAGAGTAACA CAGCACAAGT GTTATATTGT GGCCACGGTG 
GACAGAGACC TAAAAAGGAG GATTCGGAAG ATCCCAGGAG TCCCCATCAT GTACATCTCC 
AACCACAGGT ATAACATTGA GAGAATGCCG GACGATTATG GAGCACCTCG GTTTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001017601.1
CDS	64..660
Translation	MGKQKKQKKYATMKRMISLKDQRIKEKDRAKTQKKKKEDPSAIKEQEIAKYPSCLFFQYNTQLGPPYYILVDTNFINFSIKAKLDVVQSMMDCLYAKCVPCITDCVMAELEKLGMKYRVALRIAKDPRFDRLPCSHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYISNHRYNIERMPDDYGAPRF

Target ORF information:

RefSeq Version	NM_001017601.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio FCF1 rRNA-processing protein (fcf1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001017601.1

ORF Insert Sequence:

ATGGGAAAAC AGAAGAAACA GAAAAAATAT GCGACCATGA AAAGAATGAT CAGTCTGAAG 
GACCAGAGGA TAAAAGAAAA AGACAGAGCA AAAACGCAGA AGAAGAAGAA AGAAGATCCC 
TCGGCCATTA AAGAACAAGA AATAGCAAAG TACCCCTCTT GTCTCTTCTT TCAATACAAC 
ACCCAGCTTG GACCTCCGTA TTACATCCTG GTTGATACCA ACTTCATCAA CTTCTCTATT 
AAGGCCAAAT TAGATGTTGT CCAGTCGATG ATGGACTGCC TCTATGCTAA ATGTGTTCCT 
TGCATAACAG ACTGTGTGAT GGCTGAGCTG GAGAAATTAG GCATGAAGTA TCGAGTGGCT 
TTGCGGATTG CCAAAGATCC TCGATTCGAT CGATTGCCTT GTTCACACAA AGGAACATAT 
GCGGATGACT GCTTGGTGCA GAGAGTAACA CAGCACAAGT GTTATATTGT GGCCACGGTG 
GACAGAGACC TAAAAAGGAG GATTCGGAAG ATCCCAGGAG TCCCCATCAT GTACATCTCC 
AACCACAGGT ATAACATTGA GAGAATGCCG GACGATTATG GAGCACCTCG GTTTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Spatio-temporal regulation of Wnt and retinoic acid signaling by tbx16/spadetail during zebrafish mesoderm differentiation.
BMC genomics11492(2010 Sep)
Mueller RL,Huang C,Ho RK