mpdu1b cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	mpdu1b
Entrez Gene ID	415220
Full Name	mannose-P-dolichol utilization defect 1b
Synonyms	fb18d03,wu:fb18d03,zgc:86765
General protein information	Preferred Names mannose-P-dolichol utilization defect 1b Names mannose-P-dolichol utilization defect 1 protein
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001002130.1	NP_001002130.1	mannose-P-dolichol utilization defect 1 protein

Pathways from BioSystems

Homologies

Homo sapiens (human)	MPDU1	NP_004861.2
Rattus norvegicus (Norway rat)	Mpdu1	NP_001100481.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP008375	XP_317078.3
Caenorhabditis elegans (roundworm)	CELE_F38E1.9	NP_505155.1
Bos taurus (cattle)	MPDU1	NP_001068647.1
Arabidopsis thaliana (thale cress)	AT5G59470	NP_200755.1
Mus musculus (house mouse)	Mpdu1	NP_036030.2
Neurospora crassa	NCU11327	XP_965266.2
Arabidopsis thaliana (thale cress)	AT4G07390	NP_567315.1
Pan troglodytes (chimpanzee)	MPDU1	XP_511960.1
Canis lupus familiaris (dog)	MPDU1	XP_546595.1
Drosophila melanogaster (fruit fly)	CG3792	NP_608889.1
	MPDU1	XP_001110171.1
Danio rerio (zebrafish)	mpdu1b	NP_001002130.1
Magnaporthe oryzae (rice blast fungus)	MGG_08600	XP_003716131.1
Oryza sativa (rice)	Os07g0479200	NP_001059633.1

Gene Ontology
Bibliography

Related articles in PubMed

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Comparative genomic and expression analysis of group B1 sox genes in zebrafish indicates their diversification during vertebrate evolution.
Okuda Y, Yoda H, Uchikawa M, Furutani-Seiki M, Takeda H, Kondoh H, Kamachi Y
Developmental dynamics : an official publication of the American Association of Anatomists235(3)811-25(2006 Mar)

Expression profiling and comparative genomics identify a conserved regulatory region controlling midline expression in the zebrafish embryo.
Dickmeis T, Plessy C, Rastegar S, Aanstad P, Herwig R, Chalmel F, Fischer N, Str?hle U
Genome research14(2)228-38(2004 Feb)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following mpdu1b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the mpdu1b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa32807	NM_001002130.1 Latest version!	Danio rerio mannose-P-dolichol utilization defect 1b (mpdu1b), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

mpdu1b ( NM_001002130.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001002130.1 Danio rerio mannose-P-dolichol utilization defect 1b (mpdu1b), mRNA.

Price & Availability↑

CloneID	ODa32807
Clone ID Related Accession (Same CDS sequence)	NM_001002130.1
Accession Version	NM_001002130.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 768bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	mannose-P-dolichol utilization defect 1 protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC071434.1. ##Evidence-Data-START## Transcript exon combination :: BC071434.1, EH491090.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGCGGCTT CTGAAGCAGT TGTAGAAACA TCATTCATGG ATCCTTTCAA AGATGTTCTG 
GTTAATTATT TAATGCCAGA AAAATGCTAC GACGAGTTCT TTTTACAGTT CAATCTTCTG 
CACGTGGATT GTCTGAAGAT TGTAATCAGC AAAGGCCTGG GCATTGGGAT CATCCTTGGT 
TCTGTATTAG TGAAGCTACC TCAGATTCTG AAGCTGCTTG GTGCTAAAAG TGCAGAGGGA 
CTGAGCTTTA ACTCTGTGCT GCTGGAGCTG TTTGCCATCA CAGGCACCAT GGCCTACAGT 
TTAGCAAACA GCTTCCCCTT CAGTTCCTGG GGTGAGGCAC TTTTCCTCAT GTTTCAGACT 
GTGACCATTG GTTTCCTCAT ACAGCACTAT GGAGGAAAAA CTATTAAAGG TTTGGGCTTT 
CTAGTGGTTT ATTTTGGTCT GTTGGCAGTC CTTCTCTCTC CTGTGACTCC CTTGTCGGTT 
GTCACTACCA TGCAAGCCTC TAATATGCCA GCCATCATCT TTGGACGGTT AATTCAGGCC 
GGTACCAACT ACAGAAATGG TCACACTGGG CAGCTATCGG CTATTTCAGT GTTTCTGCTG 
TTTGCAGGCT CTCTGGCACG CATATTCACT ACAGTGCAGG AAACCGGAGA TTCCCTCATG 
GCCGTCACCT ACATAATCTC CTCCTGTTGT AATGGTGTGA TCGCCGCGCA GGTCCTCTAT 
TACTGGAACA GCAGCCCTGC GCTCAAGAAG AAGAAGAAGA CTCAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001002130.1
CDS	11..778
Translation	MAASEAVVETSFMDPFKDVLVNYLMPEKCYDEFFLQFNLLHVDCLKIVISKGLGIGIILGSVLVKLPQILKLLGAKSAEGLSFNSVLLELFAITGTMAYSLANSFPFSSWGEALFLMFQTVTIGFLIQHYGGKTIKGLGFLVVYFGLLAVLLSPVTPLSVVTTMQASNMPAIIFGRLIQAGTNYRNGHTGQLSAISVFLLFAGSLARIFTTVQETGDSLMAVTYIISSCCNGVIAAQVLYYWNSSPALKKKKKTQ

Target ORF information:

RefSeq Version	NM_001002130.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio mannose-P-dolichol utilization defect 1b (mpdu1b), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001002130.1

ORF Insert Sequence:

ATGGCGGCTT CTGAAGCAGT TGTAGAAACA TCATTCATGG ATCCTTTCAA AGATGTTCTG 
GTTAATTATT TAATGCCAGA AAAATGCTAC GACGAGTTCT TTTTACAGTT CAATCTTCTG 
CACGTGGATT GTCTGAAGAT TGTAATCAGC AAAGGCCTGG GCATTGGGAT CATCCTTGGT 
TCTGTATTAG TGAAGCTACC TCAGATTCTG AAGCTGCTTG GTGCTAAAAG TGCAGAGGGA 
CTGAGCTTTA ACTCTGTGCT GCTGGAGCTG TTTGCCATCA CAGGCACCAT GGCCTACAGT 
TTAGCAAACA GCTTCCCCTT CAGTTCCTGG GGTGAGGCAC TTTTCCTCAT GTTTCAGACT 
GTGACCATTG GTTTCCTCAT ACAGCACTAT GGAGGAAAAA CTATTAAAGG TTTGGGCTTT 
CTAGTGGTTT ATTTTGGTCT GTTGGCAGTC CTTCTCTCTC CTGTGACTCC CTTGTCGGTT 
GTCACTACCA TGCAAGCCTC TAATATGCCA GCCATCATCT TTGGACGGTT AATTCAGGCC 
GGTACCAACT ACAGAAATGG TCACACTGGG CAGCTATCGG CTATTTCAGT GTTTCTGCTG 
TTTGCAGGCT CTCTGGCACG CATATTCACT ACAGTGCAGG AAACCGGAGA TTCCCTCATG 
GCCGTCACCT ACATAATCTC CTCCTGTTGT AATGGTGTGA TCGCCGCGCA GGTCCTCTAT 
TACTGGAACA GCAGCCCTGC GCTCAAGAAG AAGAAGAAGA CTCAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Comparative genomic and expression analysis of group B1 sox genes in zebrafish indicates their diversification during vertebrate evolution.
Developmental dynamics : an official publication of the American Association of Anatomists235(3)811-25(2006 Mar)
Okuda Y,Yoda H,Uchikawa M,Furutani-Seiki M,Takeda H,Kondoh H,Kamachi Y

Expression profiling and comparative genomics identify a conserved regulatory region controlling midline expression in the zebrafish embryo.
Genome research14(2)228-38(2004 Feb)
Dickmeis T,Plessy C,Rastegar S,Aanstad P,Herwig R,Chalmel F,Fischer N,Str?hle U