OPN4 cDNA ORF clone, Crocodylus porosus(Australian saltwater crocodile)

Gene
Clones
gRNAs

Summary

Gene Symbol	OPN4
Entrez Gene ID	109323899
Full Name	opsin 4
Gene Type	protein-coding
Organism	Crocodylus porosus(Australian saltwater crocodile)

mRNA and Protein(s)

mRNA	Protein	Name
XM_019555551.1	XP_019411096.1	LOW QUALITY PROTEIN: melanopsin

Pathways from BioSystems
Gene Ontology

The following OPN4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the OPN4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCr85462	XM_019555551.1 Latest version!	Crocodylus porosus opsin 4 (OPN4), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

OPN4 ( XM_019555551.1 ) cDNA ORF clone, Crocodylus porosus(Australian saltwater crocodile) -> XP_019411096.1 Crocodylus porosus opsin 4 (OPN4), mRNA.

Price & Availability↑

CloneID	OCr85462
Clone ID Related Accession (Same CDS sequence)	XM_019555551.1
Accession Version	XM_019555551.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1206bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-12-19
Organism	Crocodylus porosus(Australian saltwater crocodile)
Product	LOW QUALITY PROTEIN: melanopsin
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017728951.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Crocodylus porosus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 24% of CDS bases frameshifts :: corrected 3 indels internal stop codons :: corrected 4 genomic stop codons ##RefSeq-Attributes-END##

ATGTTTGACT TGCACATATT TAAAGTTAGT GCCATAGCGA ACAACATAAG GGAGCCAAAT 
AATAAACGAG ATTTACTAGC AGAAAGGGAC GACGAGCAAG TGACGCTGAC GGAGAGACCC 
GCGCGGCGCG TCAGCCACCT TTCTGTGTGG GTACGCCCGG CCGGTGATGC CATTGAGAGC 
CACCGGCCAG CAAAGTTAAA GCAGCAGCTG CAGCCGCAGA AGGGGCAGAT GGCCCCACGG 
GAGAGCAGGA GTAGATGTCT TCGGACTCCA ACCAATGTAT TCATCATCAG TTTAGCTATT 
AGTGACTTCC TCATGNNAAC ACAGTCTCCA GTGTTCTTCT GCAGCAATCT CAAGAAACGC 
TGGATTTTTG GAGAAAAGGT TTGTGGTGAG CTGTATGCCT TCTGCGGTGC TTTCTTTGGC 
ATTACATCCA TGATCACATT AATGGTGATT GCCCTGGAAA GATATTTTGT GATCACAAGA 
CCACTGGCTT CCACTGGGGT GGTGTCCAGG AAGAAGGCTC TGATAATCCT GGTAGGAGTT 
TGGCTGTATT CTTTGGCTTG GAGCCTTCCA CCCTTCTTTG GATGGAGTGG TTATGTTCCT 
GAGGGACTGC TGACTTCCTG TTCCTGGGAC TACAAAACCT TTATCCCTTC AGTCCGTGCC 
TACACAATGC ACCTGTTCTG CTTGGTCTTC TTTATTCCTC TGACTGCTAT CATATGCAGT 
TATATTTTCA GGGCTGTCAG GAATGCCAAC AAGATGTTTT AGACCATTGG CTCTGATGGT 
GATAAGAAAG AATCCCAGAG GCAATATCAG AGGATGAAGA ATGAATGGTA GATGGCCAAA 
GTTGCCTTGA TTGTCATCTT GCTTTACGTC ATTTCCTGGT CACCATATTC TGTTGTAGCT 
CTGGTGGCTT TTGCTGGATA TTCCCGTGTC CTGACACCCT ACATGAACTC CATATCAGCT 
GTGATTGCCA AAGCTTCTGC CATTCACAAT CCCATCNATT ATGCCATTAC TCATCCCAAA 
TTCAGAATGG CCATTGTAAA ATACATTCCA TGCCTTGGAT CCATCCTGAG AGCATCCTGA 
AAAGACTCCA AGTCTTACAG CAACTATCCT TCTACCAGAT GAGCCACTGT TGCCACTCGG 
TGTTCTGATA TAAATGGGTT GCAGAAAGAA AAAAACCAAA CACCCGTCTT CTCTCTCAGA 
TACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_019411096.1
CDS	1..1206
Translation	MFDLHIFKVSAIANNIREPNNKRDLLAERDDEQVTLTERPARRVSHLSVWVRPAGDAIESHRPAKLKQQLQPQKGQMAPRESRSRCLRTPTNVFIISLAISDFLMnullTQSPVFFCSNLKKRWIFGEKVCGELYAFCGAFFGITSMITLMVIALERYFVITRPLASTGVVSRKKALIILVGVWLYSLAWSLPPFFGWSGYVPEGLLTSCSWDYKTFIPSVRAYTMHLFCLVFFIPLTAIICSYIFRAVRNANKMFTIGSDGDKKESQRQYQRMKNEWMAKVALIVILLYVISWSPYSVVALVAFAGYSRVLTPYMNSISAVIAKASAIHNPInullYAITHPKFRMAIVKYIPCLGSILRASKDSKSYSNYPSTRATVATRCSDINGLQKEKNQTPVFSLRY

Target ORF information:

RefSeq Version	XM_019555551.1
Organism	Crocodylus porosus(Australian saltwater crocodile)
Definition	Crocodylus porosus opsin 4 (OPN4), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_019555551.1

ORF Insert Sequence:

ATGTTTGACT TGCACATATT TAAAGTTAGT GCCATAGCGA ACAACATAAG GGAGCCAAAT 
AATAAACGAG ATTTACTAGC AGAAAGGGAC GACGAGCAAG TGACGCTGAC GGAGAGACCC 
GCGCGGCGCG TCAGCCACCT TTCTGTGTGG GTACGCCCGG CCGGTGATGC CATTGAGAGC 
CACCGGCCAG CAAAGTTAAA GCAGCAGCTG CAGCCGCAGA AGGGGCAGAT GGCCCCACGG 
GAGAGCAGGA GTAGATGTCT TCGGACTCCA ACCAATGTAT TCATCATCAG TTTAGCTATT 
AGTGACTTCC TCATGNNAAC ACAGTCTCCA GTGTTCTTCT GCAGCAATCT CAAGAAACGC 
TGGATTTTTG GAGAAAAGGT TTGTGGTGAG CTGTATGCCT TCTGCGGTGC TTTCTTTGGC 
ATTACATCCA TGATCACATT AATGGTGATT GCCCTGGAAA GATATTTTGT GATCACAAGA 
CCACTGGCTT CCACTGGGGT GGTGTCCAGG AAGAAGGCTC TGATAATCCT GGTAGGAGTT 
TGGCTGTATT CTTTGGCTTG GAGCCTTCCA CCCTTCTTTG GATGGAGTGG TTATGTTCCT 
GAGGGACTGC TGACTTCCTG TTCCTGGGAC TACAAAACCT TTATCCCTTC AGTCCGTGCC 
TACACAATGC ACCTGTTCTG CTTGGTCTTC TTTATTCCTC TGACTGCTAT CATATGCAGT 
TATATTTTCA GGGCTGTCAG GAATGCCAAC AAGATGTTTT AGACCATTGG CTCTGATGGT 
GATAAGAAAG AATCCCAGAG GCAATATCAG AGGATGAAGA ATGAATGGTA GATGGCCAAA 
GTTGCCTTGA TTGTCATCTT GCTTTACGTC ATTTCCTGGT CACCATATTC TGTTGTAGCT 
CTGGTGGCTT TTGCTGGATA TTCCCGTGTC CTGACACCCT ACATGAACTC CATATCAGCT 
GTGATTGCCA AAGCTTCTGC CATTCACAAT CCCATCNATT ATGCCATTAC TCATCCCAAA 
TTCAGAATGG CCATTGTAAA ATACATTCCA TGCCTTGGAT CCATCCTGAG AGCATCCTGA 
AAAGACTCCA AGTCTTACAG CAACTATCCT TCTACCAGAT GAGCCACTGT TGCCACTCGG 
TGTTCTGATA TAAATGGGTT GCAGAAAGAA AAAAACCAAA CACCCGTCTT CTCTCTCAGA 
TACTAA