| Gene Symbol | GGTA1P |
| Entrez Gene ID | 100390928 |
| Full Name | glycoprotein, alpha-galactosyltransferase 1 pseudogene |
| Synonyms | GGTA1 |
| Gene Type | protein-coding |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) |
ORF » Species Summary » Callithrix jacchus » GGTA1P cDNA ORF clone
| Gene Symbol | GGTA1P |
| Entrez Gene ID | 100390928 |
| Full Name | glycoprotein, alpha-galactosyltransferase 1 pseudogene |
| Synonyms | GGTA1 |
| Gene Type | protein-coding |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) |
| mRNA | Protein | Name |
|---|---|---|
| XM_017967738.1 | XP_017823227.1 | N-acetyllactosaminide alpha-1,3-galactosyltransferase isoform X1 |
| XM_017969840.1 | XP_017825329.1 | N-acetyllactosaminide alpha-1,3-galactosyltransferase isoform X2 |
| NM_001267732.1 | NP_001254661.1 | N-acetyllactosaminide alpha-1,3-galactosyltransferase |
| XM_009001954.2 | XP_009000202.1 | N-acetyllactosaminide alpha-1,3-galactosyltransferase isoform X1 |
Significance of the evolutionary ?1,3-galactosyltransferase (GGTA1) gene inactivation in preventing extinction of apes and old world monkeys.
Galili U
Journal of molecular evolution80(1)1-9(2015 Jan)
De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences.
Maudhoo MD, Ren D, Gradnigo JS, Gibbs RM, Lubker AC, Moriyama EN, French JA, Norgren RB Jr
GigaScience314(2014)
Molecular basis of evolutionary loss of the alpha 1,3-galactosyltransferase gene in higher primates.
Koike C, Fung JJ, Geller DA, Kannagi R, Libert T, Luppi P, Nakashima I, Profozich J, Rudert W, Sharma SB, Starzl TE, Trucco M
The Journal of biological chemistry277(12)10114-20(2002 Mar)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following GGTA1P gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the GGTA1P cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OCb00010 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001267732.1 | |
| Accession Version | NM_001267732.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1131bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-02-22 | |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) | |
| Product | N-acetyllactosaminide alpha-1,3-galactosyltransferase | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF384428.1. On Jun 18, 2012 this sequence version replaced XM_002743265.2. ##Evidence-Data-START## Transcript exon combination :: AF384428.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03282368 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGAATGTCA AAGGAAAAGT AATTCTGTCA ATGCTGGTTG TCTCAACTGT GATTGTTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001254661.1 |
| CDS | 10..1140 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001267732.1 |
1 | ATGAATGTCA AAGGAAAAGT AATTCTGTCA ATGCTGGTTG TCTCAACTGT GATTGTTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCb25461 | |
| Clone ID Related Accession (Same CDS sequence) | XM_017967738.1 , XM_009001954.2 | |
| Accession Version | XM_017967738.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1131bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-08-30 | |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) | |
| Product | N-acetyllactosaminide alpha-1,3-galactosyltransferase isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_013896.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Callithrix jacchus Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGAATGTCA AAGGAAAAGT AATTCTGTCA ATGCTGGTTG TCTCAACTGT GATTGTTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_017823227.1 |
| CDS | 220..1350 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_017967738.1 |
1 | ATGAATGTCA AAGGAAAAGT AATTCTGTCA ATGCTGGTTG TCTCAACTGT GATTGTTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCb25461 | |
| Clone ID Related Accession (Same CDS sequence) | XM_017967738.1 , XM_009001954.2 | |
| Accession Version | XM_009001954.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1131bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-08-30 | |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) | |
| Product | N-acetyllactosaminide alpha-1,3-galactosyltransferase isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_013896.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 31, 2016 this sequence version replaced XM_009001954.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Callithrix jacchus Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGAATGTCA AAGGAAAAGT AATTCTGTCA ATGCTGGTTG TCTCAACTGT GATTGTTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_009000202.1 |
| CDS | 322..1452 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_009001954.2 |
1 | ATGAATGTCA AAGGAAAAGT AATTCTGTCA ATGCTGGTTG TCTCAACTGT GATTGTTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCb46024 | |
| Clone ID Related Accession (Same CDS sequence) | XM_017969840.1 | |
| Accession Version | XM_017969840.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 993bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-08-30 | |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) | |
| Product | N-acetyllactosaminide alpha-1,3-galactosyltransferase isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_013896.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Callithrix jacchus Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGAATGTCA AAGGAAAAGT AATTCTGTCA ATGCTGGTTG TCTCAACTGT GATTGTTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_017825329.1 |
| CDS | 220..1212 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_017969840.1 |
1 | ATGAATGTCA AAGGAAAAGT AATTCTGTCA ATGCTGGTTG TCTCAACTGT GATTGTTGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Significance of the evolutionary ?1,3-galactosyltransferase (GGTA1) gene inactivation in preventing extinction of apes and old world monkeys. |
De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. |
Molecular basis of evolutionary loss of the alpha 1,3-galactosyltransferase gene in higher primates. |