| Gene Symbol | clp-1 |
| Entrez Gene ID | 176122 |
| Full Name | Calpain clp-1 |
| Gene Type | protein-coding |
| Organism | Caenorhabditis elegans |
ORF » Species Summary » Caenorhabditis elegans » clp-1 cDNA ORF clone
| Gene Symbol | clp-1 |
| Entrez Gene ID | 176122 |
| Full Name | Calpain clp-1 |
| Gene Type | protein-coding |
| Organism | Caenorhabditis elegans |
| mRNA | Protein | Name |
|---|---|---|
| NM_066340.4 | NP_498741.3 | Calpain clp-1 |
| NM_171886.4 | NP_741237.1 | Calpain clp-1 |
| NM_066339.5 | NP_498740.2 | Calpain clp-1 |
| NM_066340.5 | NP_498741.3 | Calpain clp-1 |
| NM_171201.1 | NP_741238.1 | Calpain clp-1 |
| NM_066339.6 | NP_498740.2 | Calpain clp-1 |
| NM_001372631.1 | NP_001359840.1 | Calpain clp-1 |
| NM_171886.5 | NP_741237.1 | Calpain clp-1 |
| Gallus gallus (chicken) | CAPN8 | XP_426117.2 |
| Caenorhabditis elegans (roundworm) | clp-4 | NP_497460.2 |
| Caenorhabditis elegans (roundworm) | clp-3 | NP_493052.2 |
| Caenorhabditis elegans (roundworm) | clp-7 | NP_500082.1 |
| Caenorhabditis elegans (roundworm) | clp-1 | NP_498740.2 |
| Mus musculus (house mouse) | Capn8 | NP_570960.2 |
| Homo sapiens (human) | CAPN8 | NP_001137434.1 |
| Canis lupus familiaris (dog) | CAPN8 | XP_854850.3 |
| Caenorhabditis elegans (roundworm) | clp-6 | NP_500081.1 |
| Xenopus tropicalis (tropical clawed frog) | capn8 | NP_001039108.1 |
| Xenopus tropicalis (tropical clawed frog) | LOC100497284 | XP_004914783.1 |
| Rattus norvegicus (Norway rat) | Capn8 | NP_579843.2 |
| Danio rerio (zebrafish) | capn8 | NP_001231009.1 |
Genome sequence of the nematode C. elegans: a platform for investigating biology.
Science (New York, N.Y.)282(5396)2012-8(1998 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
this study reports crystal structures of Clp1 from Caenorhabditis elegans (ceClp1) in a number of nucleotide- and RNA-bound states along the reaction pathway.
Title: RNA specificity and regulation of catalysis in the eukaryotic polynucleotide kinase Clp1.
our analyses highlight the roles of calcium dysregulation and CLP-1 in muscle myopathies and suggest that the atypical calpains could retain conserved
Title: The atypical calpains: evolutionary analyses and roles in Caenorhabditis elegans cellular degeneration.
The following clp-1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the clp-1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OCa340965 | |
| Clone ID Related Accession (Same CDS sequence) | NM_171201.1 , NM_001372631.1 | |
| Accession Version | NM_171201.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 342bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-04-08 | |
| Organism | Caenorhabditis elegans | |
| Product | Calpain clp-1 | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). COMPLETENESS: incomplete on both ends. | |
1 | ATGGCTGACG ATGAGGAAGA AATTATTCAA AAAGTCGAAG TGAAGCCGGA TGAATTCAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_741238.1 |
| CDS | 1..342 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_171201.1 |
1 | ATGGCTGACG ATGAGGAAGA AATTATTCAA AAAGTCGAAG TGAAGCCGGA TGAATTCAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCa340965 | |
| Clone ID Related Accession (Same CDS sequence) | NM_171201.1 , NM_001372631.1 | |
| Accession Version | NM_001372631.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 342bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-10-17 | |
| Organism | Caenorhabditis elegans | |
| Product | Calpain clp-1 | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). | |
1 | ATGGCTGACG ATGAGGAAGA AATTATTCAA AAAGTCGAAG TGAAGCCGGA TGAATTCAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001359840.1 |
| CDS | 140..481 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001372631.1 |
1 | ATGGCTGACG ATGAGGAAGA AATTATTCAA AAAGTCGAAG TGAAGCCGGA TGAATTCAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCa340963 | |
| Clone ID Related Accession (Same CDS sequence) | NM_066340.4 , NM_066340.5 | |
| Accession Version | NM_066340.5 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2343bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-10-17 | |
| Organism | Caenorhabditis elegans | |
| Product | Calpain clp-1 | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Sep 4, 2019 this sequence version replaced NM_066340.4. | |
1 | ATGGCTGACG ATGAGGAAGA AATTATTCAA AAAGTCGAAG TGAAGCCGGA TGAATTCAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_498741.3 |
| CDS | 96..2438 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_066340.5 |
1 | ATGGCTGACG ATGAGGAAGA AATTATTCAA AAAGTCGAAG TGAAGCCGGA TGAATTCAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCa340964 | |
| Clone ID Related Accession (Same CDS sequence) | NM_066339.5 , NM_066339.6 | |
| Accession Version | NM_066339.6 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2214bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-10-17 | |
| Organism | Caenorhabditis elegans | |
| Product | Calpain clp-1 | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Sep 4, 2019 this sequence version replaced NM_066339.5. | |
1 | ATGGCTGACG ATGAGGAAGA AATTATTCAA AAAGTCGAAG TGAAGCCGGA TGAATTCAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_498740.2 |
| CDS | 96..2309 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_066339.6 |
1 | ATGGCTGACG ATGAGGAAGA AATTATTCAA AAAGTCGAAG TGAAGCCGGA TGAATTCAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCa340966 | |
| Clone ID Related Accession (Same CDS sequence) | NM_171886.4 , NM_171886.5 | |
| Accession Version | NM_171886.5 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2280bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-10-17 | |
| Organism | Caenorhabditis elegans | |
| Product | Calpain clp-1 | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Sep 4, 2019 this sequence version replaced NM_171886.4. | |
1 | ATGGCTGACG ATGAGGAAGA AATTATTCAA AAAGTCGAAG TGAAGCCGGA TGAATTCAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_741237.1 |
| CDS | 140..2419 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_171886.5 |
1 | ATGGCTGACG ATGAGGAAGA AATTATTCAA AAAGTCGAAG TGAAGCCGGA TGAATTCAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCa340963 | |
| Clone ID Related Accession (Same CDS sequence) | NM_066340.4 , NM_066340.5 | |
| Accession Version | NM_066340.4 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2343bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-04-08 | |
| Organism | Caenorhabditis elegans | |
| Product | Calpain clp-1 | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Jun 26, 2012 this sequence version replaced NM_066340.3. COMPLETENESS: incomplete on both ends. | |
1 | ATGGCTGACG ATGAGGAAGA AATTATTCAA AAAGTCGAAG TGAAGCCGGA TGAATTCAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_498741.3 |
| CDS | 1..2343 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_066340.4 |
1 | ATGGCTGACG ATGAGGAAGA AATTATTCAA AAAGTCGAAG TGAAGCCGGA TGAATTCAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCa340964 | |
| Clone ID Related Accession (Same CDS sequence) | NM_066339.5 , NM_066339.6 | |
| Accession Version | NM_066339.5 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2214bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-04-08 | |
| Organism | Caenorhabditis elegans | |
| Product | Calpain clp-1 | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Jun 26, 2012 this sequence version replaced NM_066339.4. COMPLETENESS: incomplete on both ends. | |
1 | ATGGCTGACG ATGAGGAAGA AATTATTCAA AAAGTCGAAG TGAAGCCGGA TGAATTCAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_498740.2 |
| CDS | 1..2214 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_066339.5 |
1 | ATGGCTGACG ATGAGGAAGA AATTATTCAA AAAGTCGAAG TGAAGCCGGA TGAATTCAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCa340966 | |
| Clone ID Related Accession (Same CDS sequence) | NM_171886.4 , NM_171886.5 | |
| Accession Version | NM_171886.4 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2280bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-04-08 | |
| Organism | Caenorhabditis elegans | |
| Product | Calpain clp-1 | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Jun 26, 2012 this sequence version replaced NM_171886.3. COMPLETENESS: incomplete on both ends. | |
1 | ATGGCTGACG ATGAGGAAGA AATTATTCAA AAAGTCGAAG TGAAGCCGGA TGAATTCAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_741237.1 |
| CDS | 1..2280 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_171886.4 |
1 | ATGGCTGACG ATGAGGAAGA AATTATTCAA AAAGTCGAAG TGAAGCCGGA TGAATTCAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genome sequence of the nematode C. elegans: a platform for investigating biology. |