LOC103838488 cDNA ORF clone, Brassica rapa(field mustard)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC103838488
Entrez Gene ID	103838488
Full Name	pentatricopeptide repeat-containing protein At1g60770
Gene Type	protein-coding
Organism	Brassica rapa(field mustard)

mRNA and Protein(s)

mRNA	Protein	Name
XM_009114938.2	XP_009113186.1	pentatricopeptide repeat-containing protein At1g60770

Pathways from BioSystems
Gene Ontology

The following LOC103838488 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC103838488 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OBr166774	XM_009114938.2 Latest version!	Brassica rapa pentatricopeptide repeat-containing protein At1g60770 (LOC103838488), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC103838488 ( XM_009114938.2 ) cDNA ORF clone, Brassica rapa(field mustard) -> XP_009113186.1 Brassica rapa pentatricopeptide repeat-containing protein At1g60770 (LOC103838488), mRNA.

Price & Availability↑

CloneID	OBr166774
Clone ID Related Accession (Same CDS sequence)	XM_009114938.2
Accession Version	XM_009114938.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1476bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-10-12
Organism	Brassica rapa(field mustard)
Product	pentatricopeptide repeat-containing protein At1g60770
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024803.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Oct 13, 2016 this sequence version replaced XM_009114938.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Brassica rapa Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGCTGC GACATCTGAG CCGGCCGAGA GACATCGTAA AGAGATCGAC GAAGAAGTAC 
CTCGACGAAC CCCTTTACCA TCGTCTCTTC AAGGACGGCG GATCTGAGGT CAGTGTCCGT 
CAGCAGCTCA ATCACTTCCT CAAGGGCACC AAACACGTCT TCAAATGGGA AGTCGGAGAC 
ACGATCAAGA AGCTCCGTAG CCGCGGCCTC TATTACCCAG CTCTCAAGCT GTCTGAAGTT 
ATGGAACATA GAGGGATGAA CAAGACGGTG AGTGACCAAG CAATCCATCT CGATCTCGTT 
GCCAAAGCTC GTGGAATCGC TGCTGGGGAG TCTTACTTTG TCGATCTTCC GGAAACATCC 
AAGACCGAGC TCACCTACGC GTCTCTTTTG AACTGCTACT GCAAGGAGTT GATGACTGAG 
AAAGCCGAAG GTCTACTCAG CAAGATGAAA GAGCTCAACA TTACCGTTAG CTCCATGTCG 
TACAACAGCC TCATGACTCT CTACACAAAG ACAGGGCAGG CCGAGAGGGT TCCGGGGATG 
ATTCAGGAGA TGAAGGCCGA GGATGTCATG CCGGATTCTT ACACTTACAA TGTCTGGATG 
AGGGCTTTGG CTGCTACCGA GGATGTTTCT GGGGTTGAAA GAGTTATTGA AGAGATGAAT 
AGAGATGGTA GAGTTGCTCC TGATTGGACT ACGTATAGCA ATATGGCGTC TATATACGTT 
GACGCGGGAC TTTCTGAGAA AGCTGAGAAG GCTCTTCAGG AGCTGGAGAT GAAAAACACG 
GAGAGGGATT TTAAGGCGTA TCAGTTTCTT ATTACATTGT ATGGACGACT GGGGAAGCTG 
ACTGAGGTTT ATAGGATTTG GCGTTCGTTG AGGCTGGCTA TGCCGAAAAC CTCGAATGTA 
GCGTATCTGA ACATGATACA AGTGCTGGTG AACTTGAAAG ATGTACCCGG TGCAGAGACA 
TTGTTCAAGG AATGGCAAGC GAACTGCTCT ACTTATGACA TACGGGTTGT AAATGTGATG 
ATTGGAGCTT ATGCAAGAGA AGGTCTCATC GAAAAAGCTA ATGAACTCAA GGAGAAATCT 
CCAAGAAGAG GAGGGAAGCT CAATGCTAAA ACGTGGGAGC TCTTCATGGA TTACTTTGTA 
AAGAGGGGTG AAACGGCTCA AGCACTCGAA TGTATAACTA AGGCGGTTTC TATCGGTAAA 
GGAGATGGTG GCAAGTGGCT ACCGTCAGAG GATACAGTCA GAGCTGTGAT GAGCCAGTTT 
GAGGAAAAGA AAGATGTTAA CGGAGCTGAG AGTTTGTTGG AGATTTTAAA GAAGGGAACG 
GATGATGTAG GCGCAGAGAC CTTTGCGTCA TTGATAAGAA CATATGCAGC AGCTGGAAAG 
AGCCATCCTG CTATGCGCCA GCGTCTGAAG ATGGAGAAGG TGAAGGTTGA TAAAGCAACA 
GAGAAGCTGC TCGATGAATT ATGTCAGGAT GAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009113186.1
CDS	87..1562
Translation	MALRHLSRPRDIVKRSTKKYLDEPLYHRLFKDGGSEVSVRQQLNHFLKGTKHVFKWEVGDTIKKLRSRGLYYPALKLSEVMEHRGMNKTVSDQAIHLDLVAKARGIAAGESYFVDLPETSKTELTYASLLNCYCKELMTEKAEGLLSKMKELNITVSSMSYNSLMTLYTKTGQAERVPGMIQEMKAEDVMPDSYTYNVWMRALAATEDVSGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSEKAEKALQELEMKNTERDFKAYQFLITLYGRLGKLTEVYRIWRSLRLAMPKTSNVAYLNMIQVLVNLKDVPGAETLFKEWQANCSTYDIRVVNVMIGAYAREGLIEKANELKEKSPRRGGKLNAKTWELFMDYFVKRGETAQALECITKAVSIGKGDGGKWLPSEDTVRAVMSQFEEKKDVNGAESLLEILKKGTDDVGAETFASLIRTYAAAGKSHPAMRQRLKMEKVKVDKATEKLLDELCQDE

Target ORF information:

RefSeq Version	XM_009114938.2
Organism	Brassica rapa(field mustard)
Definition	Brassica rapa pentatricopeptide repeat-containing protein At1g60770 (LOC103838488), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009114938.2

ORF Insert Sequence:

ATGGCGCTGC GACATCTGAG CCGGCCGAGA GACATCGTAA AGAGATCGAC GAAGAAGTAC 
CTCGACGAAC CCCTTTACCA TCGTCTCTTC AAGGACGGCG GATCTGAGGT CAGTGTCCGT 
CAGCAGCTCA ATCACTTCCT CAAGGGCACC AAACACGTCT TCAAATGGGA AGTCGGAGAC 
ACGATCAAGA AGCTCCGTAG CCGCGGCCTC TATTACCCAG CTCTCAAGCT GTCTGAAGTT 
ATGGAACATA GAGGGATGAA CAAGACGGTG AGTGACCAAG CAATCCATCT CGATCTCGTT 
GCCAAAGCTC GTGGAATCGC TGCTGGGGAG TCTTACTTTG TCGATCTTCC GGAAACATCC 
AAGACCGAGC TCACCTACGC GTCTCTTTTG AACTGCTACT GCAAGGAGTT GATGACTGAG 
AAAGCCGAAG GTCTACTCAG CAAGATGAAA GAGCTCAACA TTACCGTTAG CTCCATGTCG 
TACAACAGCC TCATGACTCT CTACACAAAG ACAGGGCAGG CCGAGAGGGT TCCGGGGATG 
ATTCAGGAGA TGAAGGCCGA GGATGTCATG CCGGATTCTT ACACTTACAA TGTCTGGATG 
AGGGCTTTGG CTGCTACCGA GGATGTTTCT GGGGTTGAAA GAGTTATTGA AGAGATGAAT 
AGAGATGGTA GAGTTGCTCC TGATTGGACT ACGTATAGCA ATATGGCGTC TATATACGTT 
GACGCGGGAC TTTCTGAGAA AGCTGAGAAG GCTCTTCAGG AGCTGGAGAT GAAAAACACG 
GAGAGGGATT TTAAGGCGTA TCAGTTTCTT ATTACATTGT ATGGACGACT GGGGAAGCTG 
ACTGAGGTTT ATAGGATTTG GCGTTCGTTG AGGCTGGCTA TGCCGAAAAC CTCGAATGTA 
GCGTATCTGA ACATGATACA AGTGCTGGTG AACTTGAAAG ATGTACCCGG TGCAGAGACA 
TTGTTCAAGG AATGGCAAGC GAACTGCTCT ACTTATGACA TACGGGTTGT AAATGTGATG 
ATTGGAGCTT ATGCAAGAGA AGGTCTCATC GAAAAAGCTA ATGAACTCAA GGAGAAATCT 
CCAAGAAGAG GAGGGAAGCT CAATGCTAAA ACGTGGGAGC TCTTCATGGA TTACTTTGTA 
AAGAGGGGTG AAACGGCTCA AGCACTCGAA TGTATAACTA AGGCGGTTTC TATCGGTAAA 
GGAGATGGTG GCAAGTGGCT ACCGTCAGAG GATACAGTCA GAGCTGTGAT GAGCCAGTTT 
GAGGAAAAGA AAGATGTTAA CGGAGCTGAG AGTTTGTTGG AGATTTTAAA GAAGGGAACG 
GATGATGTAG GCGCAGAGAC CTTTGCGTCA TTGATAAGAA CATATGCAGC AGCTGGAAAG 
AGCCATCCTG CTATGCGCCA GCGTCTGAAG ATGGAGAAGG TGAAGGTTGA TAAAGCAACA 
GAGAAGCTGC TCGATGAATT ATGTCAGGAT GAGTGA