LOC108693816 cDNA ORF clone, Atta colombica

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC108693816
Entrez Gene ID	108693816
Full Name	vacuolar protein sorting-associated protein 33B
Gene Type	protein-coding
Organism	Atta colombica

mRNA and Protein(s)

mRNA	Protein	Name
XM_018202967.1	XP_018058456.1	vacuolar protein sorting-associated protein 33B

Pathways from BioSystems
Gene Ontology

The following LOC108693816 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC108693816 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAt79987	XM_018202967.1 Latest version!	Atta colombica vacuolar protein sorting-associated protein 33B (LOC108693816), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC108693816 ( XM_018202967.1 ) cDNA ORF clone, Atta colombica -> XP_018058456.1 Atta colombica vacuolar protein sorting-associated protein 33B (LOC108693816), mRNA.

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CloneID	OAt79987
Clone ID Related Accession (Same CDS sequence)	XM_018202967.1
Accession Version	XM_018202967.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1710bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-09-18
Organism	Atta colombica
Product	vacuolar protein sorting-associated protein 33B
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017259195.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta colombica Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGATATCA CTTTAGATGA TAAACTGTCC ACACTTCAGC AAATTAATCA GCAGAAACTT 
GTGAAGATAC TAGATGCCAT CCCAGGATCA AAGGATCTGA TAATAGAACA GAAACTGATG 
AAAATATTGG ATAGTTTCAT AGGAGTGACT GTATTGAAGC GATACGGAGT GGATAAAATT 
TATAAGTTGG AAGAAGGACT GAAGACATCA AATAGTCAAC GTATATTCTT AGTATCTAAC 
AGCTTGATCG CATGCAAGAG GGTCTTAGAT CAAATACAAT CTGAAATATC TTTAACTGGT 
AAACCACATG TTCAAGTATG CCATCATTTG TTGGTCGTGC CATTCGTCCC ACCTGTCTTA 
CACAATTTAG TCGAAGAGGA AGGCTTGTCC GAGCTACTTA CGTTGCAGAC GTTTTCCATA 
GAATTCATAA GATTAGATGG AAACATTTTA TCCTTGGAAA ATCCAATATT TGTCGAGCTC 
TACTATCATA AAGACACAAG TTCTCTGCGA GCGTTAGCAC GCAACCTGTG GTCGTTGCAA 
TTGATACTCG GTTCGCCAAG GCTCTCACTT TTTCTTGGCA AGCACAGTCA ACAAATGAGC 
AAGCTGATGG AATCTATGGA GCAGAGTCTG GGTTCATCTA GTCTAGAAAA CGAGGTTGGC 
GCCTTTATTG TGATGGACAG GAGTTTTGAT CTGGCTACAA CTCTCCTGAC GCCCGTAACA 
TACGCGGGTT TGTTGAACGA AGTTGTGGAG ATAAATGTCG GCATAGCGAC GTTGGAAAAA 
TCGCAAACCA GATTAGATCC GAATAAAGAT CAAATCTATG GAGAAGTGAG AGATACACCC 
TGCAGTGATG CTTTCCCGAT TTTACATAAG AAGGCCAAGT CACTCAAATC TGAACAGGAA 
GCGATACAGA CAATGAAGTT GGCTGAGATG GAGAGATATG TATCGACGAG ATTGCAAAGG 
ACCAGAGACA TGACTCAGCA ATTAGCATTT CATATATCCG CATGTCAGGC TATCGCAGAC 
ACAGTAGGCT CAGAGTTTCA AGTCTTGCAA ACGATTGAAA AATTGATGCT CGACTGCAAG 
GACCGAAAAG AATGCTTGAG CTACATTGAG AGGAATATAG ATGAGCATGA ATTGCGATGT 
TTGCGTCTTC TTTGCCTGTT GTCTATTACT ACTGATGGTG TCACGCAAAA CGAGATTTTA 
GATATTCAAA AGATGCATCT TCATACTCAT GGTTATCAGC ATATTCCACT GTTCTATAAG 
CTGCGCACAA CTGGCTTGCT AAAATACAGG AACGAATATA TTTTACATAA ACTGCCGAAC 
TGGAGCAGCG AGTGGAGTAG CAATGCGCAA AAATTAAAAA TGTTACCTGG TTCTTTAAAA 
CGATCCGATC AGAACAATCG TACTTGTCCT AGCTATGTAT TCAATAACGC TTATATACCC 
GCAATAACAC AAATATTAAA TATTGTATTA AATCAGGAGA AGGATCCTCG CAGTTTCGAG 
GATCTGACAA ATCTACCGAC TTGTATTGTA AATGGTCACC GAGGCGCATT ATCGCCAAAA 
ATGGTCGTGA TCTGCATAAT AGGAGGTATT ACTTGTGCAG AAATAGCAGC TTGCCGACTC 
ATAGAGAAGT CTACAGGGCT ACGCCTTGTC CTTACATCTG ACACTATTCT AACGGGTAAC 
AAACTCATCC AAAGGATAAA AAAGATTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_018058456.1
CDS	486..2195
Translation	MDITLDDKLSTLQQINQQKLVKILDAIPGSKDLIIEQKLMKILDSFIGVTVLKRYGVDKIYKLEEGLKTSNSQRIFLVSNSLIACKRVLDQIQSEISLTGKPHVQVCHHLLVVPFVPPVLHNLVEEEGLSELLTLQTFSIEFIRLDGNILSLENPIFVELYYHKDTSSLRALARNLWSLQLILGSPRLSLFLGKHSQQMSKLMESMEQSLGSSSLENEVGAFIVMDRSFDLATTLLTPVTYAGLLNEVVEINVGIATLEKSQTRLDPNKDQIYGEVRDTPCSDAFPILHKKAKSLKSEQEAIQTMKLAEMERYVSTRLQRTRDMTQQLAFHISACQAIADTVGSEFQVLQTIEKLMLDCKDRKECLSYIERNIDEHELRCLRLLCLLSITTDGVTQNEILDIQKMHLHTHGYQHIPLFYKLRTTGLLKYRNEYILHKLPNWSSEWSSNAQKLKMLPGSLKRSDQNNRTCPSYVFNNAYIPAITQILNIVLNQEKDPRSFEDLTNLPTCIVNGHRGALSPKMVVICIIGGITCAEIAACRLIEKSTGLRLVLTSDTILTGNKLIQRIKKI

Target ORF information:

RefSeq Version	XM_018202967.1
Organism	Atta colombica
Definition	Atta colombica vacuolar protein sorting-associated protein 33B (LOC108693816), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_018202967.1

ORF Insert Sequence:

ATGGATATCA CTTTAGATGA TAAACTGTCC ACACTTCAGC AAATTAATCA GCAGAAACTT 
GTGAAGATAC TAGATGCCAT CCCAGGATCA AAGGATCTGA TAATAGAACA GAAACTGATG 
AAAATATTGG ATAGTTTCAT AGGAGTGACT GTATTGAAGC GATACGGAGT GGATAAAATT 
TATAAGTTGG AAGAAGGACT GAAGACATCA AATAGTCAAC GTATATTCTT AGTATCTAAC 
AGCTTGATCG CATGCAAGAG GGTCTTAGAT CAAATACAAT CTGAAATATC TTTAACTGGT 
AAACCACATG TTCAAGTATG CCATCATTTG TTGGTCGTGC CATTCGTCCC ACCTGTCTTA 
CACAATTTAG TCGAAGAGGA AGGCTTGTCC GAGCTACTTA CGTTGCAGAC GTTTTCCATA 
GAATTCATAA GATTAGATGG AAACATTTTA TCCTTGGAAA ATCCAATATT TGTCGAGCTC 
TACTATCATA AAGACACAAG TTCTCTGCGA GCGTTAGCAC GCAACCTGTG GTCGTTGCAA 
TTGATACTCG GTTCGCCAAG GCTCTCACTT TTTCTTGGCA AGCACAGTCA ACAAATGAGC 
AAGCTGATGG AATCTATGGA GCAGAGTCTG GGTTCATCTA GTCTAGAAAA CGAGGTTGGC 
GCCTTTATTG TGATGGACAG GAGTTTTGAT CTGGCTACAA CTCTCCTGAC GCCCGTAACA 
TACGCGGGTT TGTTGAACGA AGTTGTGGAG ATAAATGTCG GCATAGCGAC GTTGGAAAAA 
TCGCAAACCA GATTAGATCC GAATAAAGAT CAAATCTATG GAGAAGTGAG AGATACACCC 
TGCAGTGATG CTTTCCCGAT TTTACATAAG AAGGCCAAGT CACTCAAATC TGAACAGGAA 
GCGATACAGA CAATGAAGTT GGCTGAGATG GAGAGATATG TATCGACGAG ATTGCAAAGG 
ACCAGAGACA TGACTCAGCA ATTAGCATTT CATATATCCG CATGTCAGGC TATCGCAGAC 
ACAGTAGGCT CAGAGTTTCA AGTCTTGCAA ACGATTGAAA AATTGATGCT CGACTGCAAG 
GACCGAAAAG AATGCTTGAG CTACATTGAG AGGAATATAG ATGAGCATGA ATTGCGATGT 
TTGCGTCTTC TTTGCCTGTT GTCTATTACT ACTGATGGTG TCACGCAAAA CGAGATTTTA 
GATATTCAAA AGATGCATCT TCATACTCAT GGTTATCAGC ATATTCCACT GTTCTATAAG 
CTGCGCACAA CTGGCTTGCT AAAATACAGG AACGAATATA TTTTACATAA ACTGCCGAAC 
TGGAGCAGCG AGTGGAGTAG CAATGCGCAA AAATTAAAAA TGTTACCTGG TTCTTTAAAA 
CGATCCGATC AGAACAATCG TACTTGTCCT AGCTATGTAT TCAATAACGC TTATATACCC 
GCAATAACAC AAATATTAAA TATTGTATTA AATCAGGAGA AGGATCCTCG CAGTTTCGAG 
GATCTGACAA ATCTACCGAC TTGTATTGTA AATGGTCACC GAGGCGCATT ATCGCCAAAA 
ATGGTCGTGA TCTGCATAAT AGGAGGTATT ACTTGTGCAG AAATAGCAGC TTGCCGACTC 
ATAGAGAAGT CTACAGGGCT ACGCCTTGTC CTTACATCTG ACACTATTCT AACGGGTAAC 
AAACTCATCC AAAGGATAAA AAAGATTTGA