IFIH1 cDNA ORF clone, Alligator mississippiensis(American alligator)

Gene
Clones
gRNAs

Summary

Gene Symbol	IFIH1
Entrez Gene ID	102560357
Full Name	interferon induced with helicase C domain 1
Gene Type	protein-coding
Organism	Alligator mississippiensis(American alligator)

mRNA and Protein(s)

mRNA	Protein	Name
XM_006277996.3	XP_006278058.1	interferon-induced helicase C domain-containing protein 1

Pathways from BioSystems
Gene Ontology

The following IFIH1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the IFIH1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAl78979	XM_006277996.3 Latest version!	Alligator mississippiensis interferon induced with helicase C domain 1 (IFIH1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$510.30 $729.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

IFIH1 ( XM_006277996.3 ) cDNA ORF clone, Alligator mississippiensis(American alligator) -> XP_006278058.1 Alligator mississippiensis interferon induced with helicase C domain 1 (IFIH1), mRNA.

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CloneID	OAl78979
Clone ID Related Accession (Same CDS sequence)	XM_006277996.3
Accession Version	XM_006277996.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2961bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-12-08
Organism	Alligator mississippiensis(American alligator)
Product	interferon-induced helicase C domain-containing protein 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017714267.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2016 this sequence version replaced XM_006277996.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Alligator mississippiensis Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGGAGA GCACTCAGGA CGAGCGCTAC CTCGACATGA TCTCCTGCTT CAGGTCCCGC 
ATCAAGGCCG GTCTGCGCAC GGGGCCCGTG CTGGACCACC TGCCCCAGCT GGGCGCCGAG 
CGCGAGCGCA TCCGCGCGGC GGCCGAGCAG CACGGGGAGC CGGCGGCGGC CGAGCTGCTG 
CTGCGCGCCG TGGAGCGGGG CCCGCACACG CCGGGCTGGT TCGCCGCCTT CGTGACCGCG 
CTGCAGCTCG GCGGCTGCGC CCTGGCCGCC AGCTACGCCA ACCCCAGCCT GCGCGACCTG 
CCGTCCCCGG CCGAGGAGGC CGAGCACGAC CTGTGCGTGG CGCTGCTGCA GGTGCTGCAC 
GGCTCCCTCG TGGACCGGCT GCGGACCCGG CCGGTGGCCG ACAGCTGCCT GCAGGCGGGC 
CTCGCCACGG AGGACGACAG GGAGCGGATC CGGGCTGTTA CTGAAACTCG TGGGAATAGA 
GAAGGTGCAA GGGAGCTGCT GAGTATAATA GTGCAGAAGA AAAATTGGTT CTCTGCATTT 
TTGTCTGTCC TGCGTGAAAC TGACCATGCA GACCTTGCAG ATGATTTAAG TGGAAATACA 
GGAGAGCATA AAGAAGATGA GCCAAAGCAA CCAACAACTG CAAATGAAGA AATGGAAGTT 
CAAAATTCAA TGTCTTCTGA AACGGCAAAG GAGCAAAAGC AAAACAATGA AGTGAATGAT 
ATCCTGTCCA GGGAAGACAG TTTGTTAGAA ACACATCTTA AAGATACTCC TCTAGTTTCA 
GATGAAGATG ATGCAGATAG TAGAGCTTCA CCGGAACCAG AGCTGGTCCT CCGAGATTAC 
CAGATGGAGG TTGCAAAACC AGCACTGAAC GGAGAGAATA TTATAATATG TCTCCCTACA 
GGCAGTGGTA AAACTAGAGT GGCTGTTTAC ATTACCAAAG ATCACCTGGA TAAGAAGAGA 
AAAAAATCAG AGTGTGGAAA AGTTATAGTA CTTGTCAATA AGGTACCATT AGTGGAACAG 
CACTTCCGAA AGGAGTTCTA TCCATTCCTG AAGCATTGCT ATCAAGTTAC TAGATTAAGT 
GGTGATTCTC AGATGAAGAT TTCATTCCCT GAAGTTGTCA GAAAAAATGA TGTCATTATA 
AGTACTGCTC AGATCCTTCA GAATTCAATG TCGAATGCAG CTACAGAAGA TGAAGAAGGT 
ATCCATTTAT CAGCTTTTTC TCTTATCATT ATTGATGAAT GTCATCACAC CCAGAAGGAA 
GGTGTCTACA ACAATATAAT GCGATGTTAT TTAAAAGAAA AGATGAAAAA TAAGAAACTA 
AAAAAAGAAA ATAAACAAGT GATTCGACAG CCTCAGATCC TGGGACTGAC TGCTTCACCC 
GGTGTGGGAG GTGCAAAAAA CCAAGCAAAA GCCGTAGAAC ATATTCTGAA AATATGTGCA 
AATCTTGATG CTTGTAGAAT AATGACTGTT GAAGAACATG CCTCCCAGCT GACCGATCAA 
GTGAAGGAAC CATATAAGAA GTTTGTGATT GCAGATGATA AAAGAAAGGA CCCTTTTAAA 
GAAAAAATTA TAGCAATCAT GCAAGAGATT CATACCTATT GTCAACTCAG TGCAACTTCT 
GAGTTTGGAA CTCAGCCTTA TGAACAGTGG GTAGTTAAAG AAGAGAAAAG AGCTGCAAAA 
GAAGAGAAAC GCAAAGAACG TGTTTGTGCA GAACATTTGA AGAAATACAG TGATGCCTTA 
CAAATTAATG ACACGATCCG AATGATCGAT GCATACAACC ACCTCAATAA CTTCTATAAA 
GAGGAGAAAA GCAAGAAAGC AAAAATAAGG GATGATGATG ATGATGATGA TGATGATGAT 
GATGATGAGC CAGTAGCACC AAAACAGGAT GCAACTGATA CATTTCTGTT AAATTTGTTT 
TATGAAAAAA GGAAACAGTT GAAAACAATT GCTGGCAAGC CAGAATATGA GAATGAGAAG 
CTAACAAAGT TGCGAAACAC TTTAATGGAA GAGTTCACAA AGACAGATGA AGCAAGAGGA 
ATTATCTTCA CAAAAACTCG ACAAAGTGCA TATGCCCTCT TTCAGTGGAT CAAGGACAAT 
GCAAAATTTG AAGAAGTGGG AATTAAAGCT CATTACCTTA TTGGTGCTGG ACATAACAGT 
GAATTCAAAC CCATGACTCA GAATGAACAA AAAGAAGTCA TCAGTAAATT TCGTGCTGGA 
AATATAAACC TACTTATTGC TACTACTGTG GCTGAGGAAG GTCTGGATAT CAAAGAATGT 
AACATTGTCA TCCGCTATGG TCTTGTCACC AATGAAATTG CTATGGTGCA GGCTCGTGGA 
CGAGCCCGAG CTGATGAGAG CACCTACGTA CTGGTGGCAT CAGGTGGATC AGGAGCTGCT 
GAACGTGAAA ATGTCAATAT ATTTCGTGAG CAAATGATGT ATAAAGCCAT CCAACGTGTC 
CAAAGGATGC CACAGGAGGA GTATGTAAAC AAGATTCAGG GGTTTCAGAT GCAAAGTATA 
ATGGAAATAA AAATGAAGGC AAAGAGAGAG CAGCATAAGA AATACAAGGA AAATCCATCA 
TTAATAACAT TCCTTTGCAA AAACTGTGGC AAGCTAGTAT GTTCTGGAGA AGACATACAA 
ATTATTGAAA GCATGCATCA TGTCAATGTT AAAAAGGAGT TCCAGGACCT TTATTATACA 
AGAGAAAATA GAACACTGCG AGAAAAACAT GCTGATTACC AAACAAATGG TGAAATTATC 
TGTAAACATT GTGGACAAGC TTGGGGAAAT ATGATGGTGC ACCGAGGGCT TGACCTTCCT 
TGCTTGAAAA TCAAAAATCT CGTGGTCCGA TACAAAGATA AAAAAACCTC AAATCAACTT 
TACAAGAAAT GGGGAGAGCT GCCAATCAGT TTCCCTGATT TTGACTACGC AGACCACTTT 
GTTTCCAGCG ATGAAGACTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006278058.1
CDS	230..3190
Translation	MEESTQDERYLDMISCFRSRIKAGLRTGPVLDHLPQLGAERERIRAAAEQHGEPAAAELLLRAVERGPHTPGWFAAFVTALQLGGCALAASYANPSLRDLPSPAEEAEHDLCVALLQVLHGSLVDRLRTRPVADSCLQAGLATEDDRERIRAVTETRGNREGARELLSIIVQKKNWFSAFLSVLRETDHADLADDLSGNTGEHKEDEPKQPTTANEEMEVQNSMSSETAKEQKQNNEVNDILSREDSLLETHLKDTPLVSDEDDADSRASPEPELVLRDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKKSECGKVIVLVNKVPLVEQHFRKEFYPFLKHCYQVTRLSGDSQMKISFPEVVRKNDVIISTAQILQNSMSNAATEDEEGIHLSAFSLIIIDECHHTQKEGVYNNIMRCYLKEKMKNKKLKKENKQVIRQPQILGLTASPGVGGAKNQAKAVEHILKICANLDACRIMTVEEHASQLTDQVKEPYKKFVIADDKRKDPFKEKIIAIMQEIHTYCQLSATSEFGTQPYEQWVVKEEKRAAKEEKRKERVCAEHLKKYSDALQINDTIRMIDAYNHLNNFYKEEKSKKAKIRDDDDDDDDDDDDEPVAPKQDATDTFLLNLFYEKRKQLKTIAGKPEYENEKLTKLRNTLMEEFTKTDEARGIIFTKTRQSAYALFQWIKDNAKFEEVGIKAHYLIGAGHNSEFKPMTQNEQKEVISKFRAGNINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVASGGSGAAERENVNIFREQMMYKAIQRVQRMPQEEYVNKIQGFQMQSIMEIKMKAKREQHKKYKENPSLITFLCKNCGKLVCSGEDIQIIESMHHVNVKKEFQDLYYTRENRTLREKHADYQTNGEIICKHCGQAWGNMMVHRGLDLPCLKIKNLVVRYKDKKTSNQLYKKWGELPISFPDFDYADHFVSSDED

Target ORF information:

RefSeq Version	XM_006277996.3
Organism	Alligator mississippiensis(American alligator)
Definition	Alligator mississippiensis interferon induced with helicase C domain 1 (IFIH1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006277996.3

ORF Insert Sequence:

ATGGAGGAGA GCACTCAGGA CGAGCGCTAC CTCGACATGA TCTCCTGCTT CAGGTCCCGC 
ATCAAGGCCG GTCTGCGCAC GGGGCCCGTG CTGGACCACC TGCCCCAGCT GGGCGCCGAG 
CGCGAGCGCA TCCGCGCGGC GGCCGAGCAG CACGGGGAGC CGGCGGCGGC CGAGCTGCTG 
CTGCGCGCCG TGGAGCGGGG CCCGCACACG CCGGGCTGGT TCGCCGCCTT CGTGACCGCG 
CTGCAGCTCG GCGGCTGCGC CCTGGCCGCC AGCTACGCCA ACCCCAGCCT GCGCGACCTG 
CCGTCCCCGG CCGAGGAGGC CGAGCACGAC CTGTGCGTGG CGCTGCTGCA GGTGCTGCAC 
GGCTCCCTCG TGGACCGGCT GCGGACCCGG CCGGTGGCCG ACAGCTGCCT GCAGGCGGGC 
CTCGCCACGG AGGACGACAG GGAGCGGATC CGGGCTGTTA CTGAAACTCG TGGGAATAGA 
GAAGGTGCAA GGGAGCTGCT GAGTATAATA GTGCAGAAGA AAAATTGGTT CTCTGCATTT 
TTGTCTGTCC TGCGTGAAAC TGACCATGCA GACCTTGCAG ATGATTTAAG TGGAAATACA 
GGAGAGCATA AAGAAGATGA GCCAAAGCAA CCAACAACTG CAAATGAAGA AATGGAAGTT 
CAAAATTCAA TGTCTTCTGA AACGGCAAAG GAGCAAAAGC AAAACAATGA AGTGAATGAT 
ATCCTGTCCA GGGAAGACAG TTTGTTAGAA ACACATCTTA AAGATACTCC TCTAGTTTCA 
GATGAAGATG ATGCAGATAG TAGAGCTTCA CCGGAACCAG AGCTGGTCCT CCGAGATTAC 
CAGATGGAGG TTGCAAAACC AGCACTGAAC GGAGAGAATA TTATAATATG TCTCCCTACA 
GGCAGTGGTA AAACTAGAGT GGCTGTTTAC ATTACCAAAG ATCACCTGGA TAAGAAGAGA 
AAAAAATCAG AGTGTGGAAA AGTTATAGTA CTTGTCAATA AGGTACCATT AGTGGAACAG 
CACTTCCGAA AGGAGTTCTA TCCATTCCTG AAGCATTGCT ATCAAGTTAC TAGATTAAGT 
GGTGATTCTC AGATGAAGAT TTCATTCCCT GAAGTTGTCA GAAAAAATGA TGTCATTATA 
AGTACTGCTC AGATCCTTCA GAATTCAATG TCGAATGCAG CTACAGAAGA TGAAGAAGGT 
ATCCATTTAT CAGCTTTTTC TCTTATCATT ATTGATGAAT GTCATCACAC CCAGAAGGAA 
GGTGTCTACA ACAATATAAT GCGATGTTAT TTAAAAGAAA AGATGAAAAA TAAGAAACTA 
AAAAAAGAAA ATAAACAAGT GATTCGACAG CCTCAGATCC TGGGACTGAC TGCTTCACCC 
GGTGTGGGAG GTGCAAAAAA CCAAGCAAAA GCCGTAGAAC ATATTCTGAA AATATGTGCA 
AATCTTGATG CTTGTAGAAT AATGACTGTT GAAGAACATG CCTCCCAGCT GACCGATCAA 
GTGAAGGAAC CATATAAGAA GTTTGTGATT GCAGATGATA AAAGAAAGGA CCCTTTTAAA 
GAAAAAATTA TAGCAATCAT GCAAGAGATT CATACCTATT GTCAACTCAG TGCAACTTCT 
GAGTTTGGAA CTCAGCCTTA TGAACAGTGG GTAGTTAAAG AAGAGAAAAG AGCTGCAAAA 
GAAGAGAAAC GCAAAGAACG TGTTTGTGCA GAACATTTGA AGAAATACAG TGATGCCTTA 
CAAATTAATG ACACGATCCG AATGATCGAT GCATACAACC ACCTCAATAA CTTCTATAAA 
GAGGAGAAAA GCAAGAAAGC AAAAATAAGG GATGATGATG ATGATGATGA TGATGATGAT 
GATGATGAGC CAGTAGCACC AAAACAGGAT GCAACTGATA CATTTCTGTT AAATTTGTTT 
TATGAAAAAA GGAAACAGTT GAAAACAATT GCTGGCAAGC CAGAATATGA GAATGAGAAG 
CTAACAAAGT TGCGAAACAC TTTAATGGAA GAGTTCACAA AGACAGATGA AGCAAGAGGA 
ATTATCTTCA CAAAAACTCG ACAAAGTGCA TATGCCCTCT TTCAGTGGAT CAAGGACAAT 
GCAAAATTTG AAGAAGTGGG AATTAAAGCT CATTACCTTA TTGGTGCTGG ACATAACAGT 
GAATTCAAAC CCATGACTCA GAATGAACAA AAAGAAGTCA TCAGTAAATT TCGTGCTGGA 
AATATAAACC TACTTATTGC TACTACTGTG GCTGAGGAAG GTCTGGATAT CAAAGAATGT 
AACATTGTCA TCCGCTATGG TCTTGTCACC AATGAAATTG CTATGGTGCA GGCTCGTGGA 
CGAGCCCGAG CTGATGAGAG CACCTACGTA CTGGTGGCAT CAGGTGGATC AGGAGCTGCT 
GAACGTGAAA ATGTCAATAT ATTTCGTGAG CAAATGATGT ATAAAGCCAT CCAACGTGTC 
CAAAGGATGC CACAGGAGGA GTATGTAAAC AAGATTCAGG GGTTTCAGAT GCAAAGTATA 
ATGGAAATAA AAATGAAGGC AAAGAGAGAG CAGCATAAGA AATACAAGGA AAATCCATCA 
TTAATAACAT TCCTTTGCAA AAACTGTGGC AAGCTAGTAT GTTCTGGAGA AGACATACAA 
ATTATTGAAA GCATGCATCA TGTCAATGTT AAAAAGGAGT TCCAGGACCT TTATTATACA 
AGAGAAAATA GAACACTGCG AGAAAAACAT GCTGATTACC AAACAAATGG TGAAATTATC 
TGTAAACATT GTGGACAAGC TTGGGGAAAT ATGATGGTGC ACCGAGGGCT TGACCTTCCT 
TGCTTGAAAA TCAAAAATCT CGTGGTCCGA TACAAAGATA AAAAAACCTC AAATCAACTT 
TACAAGAAAT GGGGAGAGCT GCCAATCAGT TTCCCTGATT TTGACTACGC AGACCACTTT 
GTTTCCAGCG ATGAAGACTA A