LOC5579976 cDNA ORF clone, Aedes aegypti(yellow fever mosquito)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC5579976
Entrez Gene ID	5579976
Full Name	intraflagellar transport protein 88 homolog
Synonyms	AAEL007730
Gene Type	protein-coding
Organism	Aedes aegypti(yellow fever mosquito)

mRNA and Protein(s)

mRNA	Protein	Name
XM_001658558.1	XP_001658608.1	AAEL007730-PA
XM_001658558.2	XP_001658608.1	intraflagellar transport protein 88 homolog

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Genome sequence of Aedes aegypti, a major arbovirus vector.
Nene V, Wortman JR, Lawson D, Haas B, Kodira C, Tu ZJ, Loftus B, Xi Z, Megy K, Grabherr M, Ren Q, Zdobnov EM, Lobo NF, Campbell KS, Brown SE, Bonaldo MF, Zhu J, Sinkins SP, Hogenkamp DG, Amedeo P, Arensburger P, Atkinson PW, Bidwell S, Biedler J, Birney E, Bruggner RV, Costas J, Coy MR, Crabtree J, Crawford M, Debruyn B, Decaprio D, Eiglmeier K, Eisenstadt E, El-Dorry H, Gelbart WM, Gomes SL, Hammond M, Hannick LI, Hogan JR, Holmes MH, Jaffe D, Johnston JS, Kennedy RC, Koo H, Kravitz S, Kriventseva EV, Kulp D, Labutti K, Lee E, Li S, Lovin DD, Mao C, Mauceli E, Menck CF, Miller JR, Montgomery P, Mori A, Nascimento AL, Naveira HF, Nusbaum C, O'leary S, Orvis J, Pertea M, Quesneville H, Reidenbach KR, Rogers YH, Roth CW, Schneider JR, Schatz M, Shumway M, Stanke M, Stinson EO, Tubio JM, Vanzee JP, Verjovski-Almeida S, Werner D, White O, Wyder S, Zeng Q, Zhao Q, Zhao Y, Hill CA, Raikhel AS, Soares MB, Knudson DL, Lee NH, Galagan J, Salzberg SL, Paulsen IT, Dimopoulos G, Collins FH, Birren B, Fraser-Liggett CM, Severson DW
Science (New York, N.Y.)316(5832)1718-23(2007 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC5579976 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC5579976 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OAe14106	XM_001658558.2 Latest version!	Aedes aegypti intraflagellar transport protein 88 homolog (LOC5579976), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00
View Old Accession Versions >>
OAe14106	XM_001658558.1	Aedes aegypti AAEL007730-RA partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC5579976 ( XM_001658558.1 ) cDNA ORF clone, Aedes aegypti(yellow fever mosquito) -> XP_001658608.1 Aedes aegypti AAEL007730-RA partial mRNA.

Price & Availability↑

CloneID	OAe14106
Clone ID Related Accession (Same CDS sequence)	XM_001658558.1 , XM_001658558.2
Accession Version	XM_001658558.1	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2403bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2015-03-04
Organism	Aedes aegypti(Yellow fever mosquito)
Product	AAEL007730-PA
Comment	PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_001810993). COMPLETENESS: incomplete on both ends.

ATGAACTCCC TAATCGAGGA CGATATATAC GGCGGATTTT CCGGCGTTAC CAATAAACTG 
TTCAACTACG ACATCAAGGA GGACAAAGCG TTTCAAAATG CCGTGAAAAC CTCCAGCTAC 
GGCAAGAAAA CTTCGACACC GAAGTTCTTC TGGAATGGGG ACAAACTGGG TTCGGCGGAC 
GCTTCGGCCA CAATGGCACG TCCTTCAACG GCCATTCGTG CAGTGGGATA CTCTTCGCAG 
AGTAGCAAAC TTTTTGATCC ACTGAATCAG GCTGCGAAGA AGATCGTCGT GATGGAGAGC 
AAGAAAGAGG AAACTCCTGA ACAGCGCTAT AAAAACATGG AAACCAAGAT CTACGCACTG 
CTGGAAGAAT CGATCATTGC CAGTACTGGC CCCAAACCAG ACATGTTGGC CGGGCTAGCG 
AAAGCGAAGG AAGCCTCGGC AATGGATCGA ACATTGTTGC GTATGCGAGA TCAAGATGGT 
GGAACGTATA CTCACAATTT TGACCTGACG TTCTTCGTCC TGTTCAACCT GGCCAACGTG 
TACGCCAAGA ACGAGATGTA CATCGAAGCC TTGAACACAT ACACGTTGAT GACCAAGAAT 
AAAATGTTTC CCAATGTGAA CCGTTTGAAG ATCAACATGG GGAACATCTA CTTTCATCTG 
GGTCTTTACA CAAAAGCGAT CAAGATGTAT CGGATGGCGT TGGACCAGGT TCCCAGCAAT 
CAGAAAGAGC TCCGGCTGAA GATCACCCAT AACATTGGCA TACTGTTCAT TAAGATGGGC 
CAGTACTCGG ATGCTGCGAC TAGTTTTGAG TTTATCATGT CGGAGAAGGG CGATCTGAAG 
ACCGGACTGC ACTTGATTTT GTGTTACTAC GCGCTCGGGG ACGTAGAGAA GATCAAGCAC 
GCCTTCCAGT TATTGCTGGA CATTCAGATC GATTACTTGG AAGATGATAA GATTTTTCAA 
ACGAATTCCA ATCCATCGTA CGAGTACATC AACGAAATGA TCAAGTCCGA TGAGCTGCAC 
GTCTACGAAC AGAAGATACG ACACCTGGCG GAGAAGAACA TACTGATTTC GGCCAATCTG 
ATTTCGACTA TAATCGACGA TTACTTCAAC GATGGCTACA GTTGGTGCGT GGAAACTATC 
AAAAACTCCT ACTTTTCCTC TCTGGCTGTA GATTTGGAGC TGAAGAAGGC CGTCATCTAC 
CTGAAACAGG ACGATATTCA GCAGGCGATC GAAACGTTGA AGTACTTCGA AAAGAAAGAA 
TCCAATATTG CCATCAATGC TGCGATCAAT CTCAGCTTCA TTCACATTCT GAAAAAGGAC 
ATCGCCACGG CCGAAACCTA CGCTGAAACA GCCAAAAAAA TCGACAGCTA CTGCCCGGCT 
GCATTCATCA ACAGCGGAGT CTGTAACTTG CTCAAAAACG ATCTGGAAAC GGCAAAGCTT 
ATGTTTTTCA ACGCCCTGGA CATTGACTCG ACTTCGTTCG AGGCACTGTA CAACATTGGA 
TTGATCTTCA AAAAGCTTGG TGATCATAAC AACTCGCTGC TCTACTTCCG CAAGATCATA 
TCCAACCTGG GTCACGAGCA ACATCCGGAG GTTCTCTACC AAATCGCGAG CCTGTACGAT 
CTGCTGGGTG ACGTTGGAAC GGCCTTAGAA TACCACTTGC AGCTGTTGAG CCTGGTTCAA 
CAGGACAACA AGATCATCCA GAAGATTGGC GAACTCTACG AGACGGATGG CGAAAGACAG 
CAAGCCTATC ACTATCACCA CGAATCCTAT CGCATTTTCC CCATCGAGTC CAGCGTGATC 
AACTGGTTGT GTTCGCACTA CATCGAGCTT CAGGTGGTCG AGAAAGCAAT CGGGTTCTAC 
GAGAAGGCCG TCCTTAAGAA CCCACAGGAT CCCTATTATC TCCTACGGAT CGCAGGCTGC 
TACCGCCGTA TCGGCAATCA GCAAAAGTCA CTGAACCTAT TCAAGATGAT CCACGAAATT 
TACCCGGAAA ACGTGGACTG CTTGCGGGCG TTGATCCATC TGACCCAGAC CCAGGGCAAC 
AACGAACTGT GCGAGCGGTA CATGAGTGAA CTGCAGAAGT TGGAGAAACA GAAAGAAGTT 
CGCCAACGGA TCAACACCAG TAGACCGCCA ACCACGGCGA GCAGTTCGCG AATCTCCAGC 
GGTGAGCACA GTGCTCGATC GGGTGCGGGT GGCGGAGGAT CGGACAGCTA TCAACCGCCG 
GGTACTGCAT CAGGGGGGAA CAAGAGTTCC GACGTATCAC CAGATTACAA CGCAAGTGCG 
TACGGCTATG CGGATCCTTT GGGACCTCCC CAAGAAAGAC CACGCACCGG AGTCCGCAAA 
AATCTTACGC TGGACGATGA TTCCGATGAG GATATAAATC CGTACGATTT GTTGCCGGTT 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001658608.1
CDS	1..2403
Translation	MNSLIEDDIYGGFSGVTNKLFNYDIKEDKAFQNAVKTSSYGKKTSTPKFFWNGDKLGSADASATMARPSTAIRAVGYSSQSSKLFDPLNQAAKKIVVMESKKEETPEQRYKNMETKIYALLEESIIASTGPKPDMLAGLAKAKEASAMDRTLLRMRDQDGGTYTHNFDLTFFVLFNLANVYAKNEMYIEALNTYTLMTKNKMFPNVNRLKINMGNIYFHLGLYTKAIKMYRMALDQVPSNQKELRLKITHNIGILFIKMGQYSDAATSFEFIMSEKGDLKTGLHLILCYYALGDVEKIKHAFQLLLDIQIDYLEDDKIFQTNSNPSYEYINEMIKSDELHVYEQKIRHLAEKNILISANLISTIIDDYFNDGYSWCVETIKNSYFSSLAVDLELKKAVIYLKQDDIQQAIETLKYFEKKESNIAINAAINLSFIHILKKDIATAETYAETAKKIDSYCPAAFINSGVCNLLKNDLETAKLMFFNALDIDSTSFEALYNIGLIFKKLGDHNNSLLYFRKIISNLGHEQHPEVLYQIASLYDLLGDVGTALEYHLQLLSLVQQDNKIIQKIGELYETDGERQQAYHYHHESYRIFPIESSVINWLCSHYIELQVVEKAIGFYEKAVLKNPQDPYYLLRIAGCYRRIGNQQKSLNLFKMIHEIYPENVDCLRALIHLTQTQGNNELCERYMSELQKLEKQKEVRQRINTSRPPTTASSSRISSGEHSARSGAGGGGSDSYQPPGTASGGNKSSDVSPDYNASAYGYADPLGPPQERPRTGVRKNLTLDDDSDEDINPYDLLPV

Target ORF information:

RefSeq Version	XM_001658558.1
Organism	Aedes aegypti(Yellow fever mosquito)
Definition	Aedes aegypti AAEL007730-RA partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001658558.1

ORF Insert Sequence:

ATGAACTCCC TAATCGAGGA CGATATATAC GGCGGATTTT CCGGCGTTAC CAATAAACTG 
TTCAACTACG ACATCAAGGA GGACAAAGCG TTTCAAAATG CCGTGAAAAC CTCCAGCTAC 
GGCAAGAAAA CTTCGACACC GAAGTTCTTC TGGAATGGGG ACAAACTGGG TTCGGCGGAC 
GCTTCGGCCA CAATGGCACG TCCTTCAACG GCCATTCGTG CAGTGGGATA CTCTTCGCAG 
AGTAGCAAAC TTTTTGATCC ACTGAATCAG GCTGCGAAGA AGATCGTCGT GATGGAGAGC 
AAGAAAGAGG AAACTCCTGA ACAGCGCTAT AAAAACATGG AAACCAAGAT CTACGCACTG 
CTGGAAGAAT CGATCATTGC CAGTACTGGC CCCAAACCAG ACATGTTGGC CGGGCTAGCG 
AAAGCGAAGG AAGCCTCGGC AATGGATCGA ACATTGTTGC GTATGCGAGA TCAAGATGGT 
GGAACGTATA CTCACAATTT TGACCTGACG TTCTTCGTCC TGTTCAACCT GGCCAACGTG 
TACGCCAAGA ACGAGATGTA CATCGAAGCC TTGAACACAT ACACGTTGAT GACCAAGAAT 
AAAATGTTTC CCAATGTGAA CCGTTTGAAG ATCAACATGG GGAACATCTA CTTTCATCTG 
GGTCTTTACA CAAAAGCGAT CAAGATGTAT CGGATGGCGT TGGACCAGGT TCCCAGCAAT 
CAGAAAGAGC TCCGGCTGAA GATCACCCAT AACATTGGCA TACTGTTCAT TAAGATGGGC 
CAGTACTCGG ATGCTGCGAC TAGTTTTGAG TTTATCATGT CGGAGAAGGG CGATCTGAAG 
ACCGGACTGC ACTTGATTTT GTGTTACTAC GCGCTCGGGG ACGTAGAGAA GATCAAGCAC 
GCCTTCCAGT TATTGCTGGA CATTCAGATC GATTACTTGG AAGATGATAA GATTTTTCAA 
ACGAATTCCA ATCCATCGTA CGAGTACATC AACGAAATGA TCAAGTCCGA TGAGCTGCAC 
GTCTACGAAC AGAAGATACG ACACCTGGCG GAGAAGAACA TACTGATTTC GGCCAATCTG 
ATTTCGACTA TAATCGACGA TTACTTCAAC GATGGCTACA GTTGGTGCGT GGAAACTATC 
AAAAACTCCT ACTTTTCCTC TCTGGCTGTA GATTTGGAGC TGAAGAAGGC CGTCATCTAC 
CTGAAACAGG ACGATATTCA GCAGGCGATC GAAACGTTGA AGTACTTCGA AAAGAAAGAA 
TCCAATATTG CCATCAATGC TGCGATCAAT CTCAGCTTCA TTCACATTCT GAAAAAGGAC 
ATCGCCACGG CCGAAACCTA CGCTGAAACA GCCAAAAAAA TCGACAGCTA CTGCCCGGCT 
GCATTCATCA ACAGCGGAGT CTGTAACTTG CTCAAAAACG ATCTGGAAAC GGCAAAGCTT 
ATGTTTTTCA ACGCCCTGGA CATTGACTCG ACTTCGTTCG AGGCACTGTA CAACATTGGA 
TTGATCTTCA AAAAGCTTGG TGATCATAAC AACTCGCTGC TCTACTTCCG CAAGATCATA 
TCCAACCTGG GTCACGAGCA ACATCCGGAG GTTCTCTACC AAATCGCGAG CCTGTACGAT 
CTGCTGGGTG ACGTTGGAAC GGCCTTAGAA TACCACTTGC AGCTGTTGAG CCTGGTTCAA 
CAGGACAACA AGATCATCCA GAAGATTGGC GAACTCTACG AGACGGATGG CGAAAGACAG 
CAAGCCTATC ACTATCACCA CGAATCCTAT CGCATTTTCC CCATCGAGTC CAGCGTGATC 
AACTGGTTGT GTTCGCACTA CATCGAGCTT CAGGTGGTCG AGAAAGCAAT CGGGTTCTAC 
GAGAAGGCCG TCCTTAAGAA CCCACAGGAT CCCTATTATC TCCTACGGAT CGCAGGCTGC 
TACCGCCGTA TCGGCAATCA GCAAAAGTCA CTGAACCTAT TCAAGATGAT CCACGAAATT 
TACCCGGAAA ACGTGGACTG CTTGCGGGCG TTGATCCATC TGACCCAGAC CCAGGGCAAC 
AACGAACTGT GCGAGCGGTA CATGAGTGAA CTGCAGAAGT TGGAGAAACA GAAAGAAGTT 
CGCCAACGGA TCAACACCAG TAGACCGCCA ACCACGGCGA GCAGTTCGCG AATCTCCAGC 
GGTGAGCACA GTGCTCGATC GGGTGCGGGT GGCGGAGGAT CGGACAGCTA TCAACCGCCG 
GGTACTGCAT CAGGGGGGAA CAAGAGTTCC GACGTATCAC CAGATTACAA CGCAAGTGCG 
TACGGCTATG CGGATCCTTT GGGACCTCCC CAAGAAAGAC CACGCACCGG AGTCCGCAAA 
AATCTTACGC TGGACGATGA TTCCGATGAG GATATAAATC CGTACGATTT GTTGCCGGTT 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC5579976 ( XM_001658558.2 ) cDNA ORF clone, Aedes aegypti(yellow fever mosquito) -> XP_001658608.1 Aedes aegypti intraflagellar transport protein 88 homolog (LOC5579976), mRNA.

Price & Availability↑

CloneID	OAe14106
Clone ID Related Accession (Same CDS sequence)	XM_001658558.1 , XM_001658558.2
Accession Version	XM_001658558.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2403bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-07-19
Organism	Aedes aegypti(yellow fever mosquito)
Product	intraflagellar transport protein 88 homolog
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_035108.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jul 20, 2017 this sequence version replaced XM_001658558.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Aedes aegypti Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAACTCCC TAATCGAGGA CGATATATAC GGCGGATTTT CCGGCGTTAC CAATAAACTG 
TTCAACTACG ACATCAAGGA GGACAAAGCG TTTCAAAATG CCGTGAAAAC CTCCAGCTAC 
GGCAAGAAAA CTTCGACACC GAAGTTCTTC TGGAATGGGG ACAAACTGGG TTCGGCGGAC 
GCTTCGGCCA CAATGGCACG TCCTTCAACG GCCATTCGTG CAGTGGGATA CTCTTCGCAG 
AGTAGCAAAC TTTTTGATCC ACTGAATCAG GCTGCGAAGA AGATCGTCGT GATGGAGAGC 
AAGAAAGAGG AAACTCCTGA ACAGCGCTAT AAAAACATGG AAACCAAGAT CTACGCACTG 
CTGGAAGAAT CGATCATTGC CAGTACTGGC CCCAAACCAG ACATGTTGGC CGGGCTAGCG 
AAAGCGAAGG AAGCCTCGGC AATGGATCGA ACATTGTTGC GTATGCGAGA TCAAGATGGT 
GGAACGTATA CTCACAATTT TGACCTGACG TTCTTCGTCC TGTTCAACCT GGCCAACGTG 
TACGCCAAGA ACGAGATGTA CATCGAAGCC TTGAACACAT ACACGTTGAT GACCAAGAAT 
AAAATGTTTC CCAATGTGAA CCGTTTGAAG ATCAACATGG GGAACATCTA CTTTCATCTG 
GGTCTTTACA CAAAAGCGAT CAAGATGTAT CGGATGGCGT TGGACCAGGT TCCCAGCAAT 
CAGAAAGAGC TCCGGCTGAA GATCACCCAT AACATTGGCA TACTGTTCAT TAAGATGGGC 
CAGTACTCGG ATGCTGCGAC TAGTTTTGAG TTTATCATGT CGGAGAAGGG CGATCTGAAG 
ACCGGACTGC ACTTGATTTT GTGTTACTAC GCGCTCGGGG ACGTAGAGAA GATCAAGCAC 
GCCTTCCAGT TATTGCTGGA CATTCAGATC GATTACTTGG AAGATGATAA GATTTTTCAA 
ACGAATTCCA ATCCATCGTA CGAGTACATC AACGAAATGA TCAAGTCCGA TGAGCTGCAC 
GTCTACGAAC AGAAGATACG ACACCTGGCG GAGAAGAACA TACTGATTTC GGCCAATCTG 
ATTTCGACTA TAATCGACGA TTACTTCAAC GATGGCTACA GTTGGTGCGT GGAAACTATC 
AAAAACTCCT ACTTTTCCTC TCTGGCTGTA GATTTGGAGC TGAAGAAGGC CGTCATCTAC 
CTGAAACAGG ACGATATTCA GCAGGCGATC GAAACGTTGA AGTACTTCGA AAAGAAAGAA 
TCCAATATTG CCATCAATGC TGCGATCAAT CTCAGCTTCA TTCACATTCT GAAAAAGGAC 
ATCGCCACGG CCGAAACCTA CGCTGAAACA GCCAAAAAAA TCGACAGCTA CTGCCCGGCT 
GCATTCATCA ACAGCGGAGT CTGTAACTTG CTCAAAAACG ATCTGGAAAC GGCAAAGCTT 
ATGTTTTTCA ACGCCCTGGA CATTGACTCG ACTTCGTTCG AGGCACTGTA CAACATTGGA 
TTGATCTTCA AAAAGCTTGG TGATCATAAC AACTCGCTGC TCTACTTCCG CAAGATCATA 
TCCAACCTGG GTCACGAGCA ACATCCGGAG GTTCTCTACC AAATCGCGAG CCTGTACGAT 
CTGCTGGGTG ACGTTGGAAC GGCCTTAGAA TACCACTTGC AGCTGTTGAG CCTGGTTCAA 
CAGGACAACA AGATCATCCA GAAGATTGGC GAACTCTACG AGACGGATGG CGAAAGACAG 
CAAGCCTATC ACTATCACCA CGAATCCTAT CGCATTTTCC CCATCGAGTC CAGCGTGATC 
AACTGGTTGT GTTCGCACTA CATCGAGCTT CAGGTGGTCG AGAAAGCAAT CGGGTTCTAC 
GAGAAGGCCG TCCTTAAGAA CCCACAGGAT CCCTATTATC TCCTACGGAT CGCAGGCTGC 
TACCGCCGTA TCGGCAATCA GCAAAAGTCA CTGAACCTAT TCAAGATGAT CCACGAAATT 
TACCCGGAAA ACGTGGACTG CTTGCGGGCG TTGATCCATC TGACCCAGAC CCAGGGCAAC 
AACGAACTGT GCGAGCGGTA CATGAGTGAA CTGCAGAAGT TGGAGAAACA GAAAGAAGTT 
CGCCAACGGA TCAACACCAG TAGACCGCCA ACCACGGCGA GCAGTTCGCG AATCTCCAGC 
GGTGAGCACA GTGCTCGATC GGGTGCGGGT GGCGGAGGAT CGGACAGCTA TCAACCGCCG 
GGTACTGCAT CAGGGGGGAA CAAGAGTTCC GACGTATCAC CAGATTACAA CGCAAGTGCG 
TACGGCTATG CGGATCCTTT GGGACCTCCC CAAGAAAGAC CACGCACCGG AGTCCGCAAA 
AATCTTACGC TGGACGATGA TTCCGATGAG GATATAAATC CGTACGATTT GTTGCCGGTT 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001658608.1
CDS	99..2501
Translation	MNSLIEDDIYGGFSGVTNKLFNYDIKEDKAFQNAVKTSSYGKKTSTPKFFWNGDKLGSADASATMARPSTAIRAVGYSSQSSKLFDPLNQAAKKIVVMESKKEETPEQRYKNMETKIYALLEESIIASTGPKPDMLAGLAKAKEASAMDRTLLRMRDQDGGTYTHNFDLTFFVLFNLANVYAKNEMYIEALNTYTLMTKNKMFPNVNRLKINMGNIYFHLGLYTKAIKMYRMALDQVPSNQKELRLKITHNIGILFIKMGQYSDAATSFEFIMSEKGDLKTGLHLILCYYALGDVEKIKHAFQLLLDIQIDYLEDDKIFQTNSNPSYEYINEMIKSDELHVYEQKIRHLAEKNILISANLISTIIDDYFNDGYSWCVETIKNSYFSSLAVDLELKKAVIYLKQDDIQQAIETLKYFEKKESNIAINAAINLSFIHILKKDIATAETYAETAKKIDSYCPAAFINSGVCNLLKNDLETAKLMFFNALDIDSTSFEALYNIGLIFKKLGDHNNSLLYFRKIISNLGHEQHPEVLYQIASLYDLLGDVGTALEYHLQLLSLVQQDNKIIQKIGELYETDGERQQAYHYHHESYRIFPIESSVINWLCSHYIELQVVEKAIGFYEKAVLKNPQDPYYLLRIAGCYRRIGNQQKSLNLFKMIHEIYPENVDCLRALIHLTQTQGNNELCERYMSELQKLEKQKEVRQRINTSRPPTTASSSRISSGEHSARSGAGGGGSDSYQPPGTASGGNKSSDVSPDYNASAYGYADPLGPPQERPRTGVRKNLTLDDDSDEDINPYDLLPV

Target ORF information:

RefSeq Version	XM_001658558.2
Organism	Aedes aegypti(yellow fever mosquito)
Definition	Aedes aegypti intraflagellar transport protein 88 homolog (LOC5579976), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001658558.2

ORF Insert Sequence:

ATGAACTCCC TAATCGAGGA CGATATATAC GGCGGATTTT CCGGCGTTAC CAATAAACTG 
TTCAACTACG ACATCAAGGA GGACAAAGCG TTTCAAAATG CCGTGAAAAC CTCCAGCTAC 
GGCAAGAAAA CTTCGACACC GAAGTTCTTC TGGAATGGGG ACAAACTGGG TTCGGCGGAC 
GCTTCGGCCA CAATGGCACG TCCTTCAACG GCCATTCGTG CAGTGGGATA CTCTTCGCAG 
AGTAGCAAAC TTTTTGATCC ACTGAATCAG GCTGCGAAGA AGATCGTCGT GATGGAGAGC 
AAGAAAGAGG AAACTCCTGA ACAGCGCTAT AAAAACATGG AAACCAAGAT CTACGCACTG 
CTGGAAGAAT CGATCATTGC CAGTACTGGC CCCAAACCAG ACATGTTGGC CGGGCTAGCG 
AAAGCGAAGG AAGCCTCGGC AATGGATCGA ACATTGTTGC GTATGCGAGA TCAAGATGGT 
GGAACGTATA CTCACAATTT TGACCTGACG TTCTTCGTCC TGTTCAACCT GGCCAACGTG 
TACGCCAAGA ACGAGATGTA CATCGAAGCC TTGAACACAT ACACGTTGAT GACCAAGAAT 
AAAATGTTTC CCAATGTGAA CCGTTTGAAG ATCAACATGG GGAACATCTA CTTTCATCTG 
GGTCTTTACA CAAAAGCGAT CAAGATGTAT CGGATGGCGT TGGACCAGGT TCCCAGCAAT 
CAGAAAGAGC TCCGGCTGAA GATCACCCAT AACATTGGCA TACTGTTCAT TAAGATGGGC 
CAGTACTCGG ATGCTGCGAC TAGTTTTGAG TTTATCATGT CGGAGAAGGG CGATCTGAAG 
ACCGGACTGC ACTTGATTTT GTGTTACTAC GCGCTCGGGG ACGTAGAGAA GATCAAGCAC 
GCCTTCCAGT TATTGCTGGA CATTCAGATC GATTACTTGG AAGATGATAA GATTTTTCAA 
ACGAATTCCA ATCCATCGTA CGAGTACATC AACGAAATGA TCAAGTCCGA TGAGCTGCAC 
GTCTACGAAC AGAAGATACG ACACCTGGCG GAGAAGAACA TACTGATTTC GGCCAATCTG 
ATTTCGACTA TAATCGACGA TTACTTCAAC GATGGCTACA GTTGGTGCGT GGAAACTATC 
AAAAACTCCT ACTTTTCCTC TCTGGCTGTA GATTTGGAGC TGAAGAAGGC CGTCATCTAC 
CTGAAACAGG ACGATATTCA GCAGGCGATC GAAACGTTGA AGTACTTCGA AAAGAAAGAA 
TCCAATATTG CCATCAATGC TGCGATCAAT CTCAGCTTCA TTCACATTCT GAAAAAGGAC 
ATCGCCACGG CCGAAACCTA CGCTGAAACA GCCAAAAAAA TCGACAGCTA CTGCCCGGCT 
GCATTCATCA ACAGCGGAGT CTGTAACTTG CTCAAAAACG ATCTGGAAAC GGCAAAGCTT 
ATGTTTTTCA ACGCCCTGGA CATTGACTCG ACTTCGTTCG AGGCACTGTA CAACATTGGA 
TTGATCTTCA AAAAGCTTGG TGATCATAAC AACTCGCTGC TCTACTTCCG CAAGATCATA 
TCCAACCTGG GTCACGAGCA ACATCCGGAG GTTCTCTACC AAATCGCGAG CCTGTACGAT 
CTGCTGGGTG ACGTTGGAAC GGCCTTAGAA TACCACTTGC AGCTGTTGAG CCTGGTTCAA 
CAGGACAACA AGATCATCCA GAAGATTGGC GAACTCTACG AGACGGATGG CGAAAGACAG 
CAAGCCTATC ACTATCACCA CGAATCCTAT CGCATTTTCC CCATCGAGTC CAGCGTGATC 
AACTGGTTGT GTTCGCACTA CATCGAGCTT CAGGTGGTCG AGAAAGCAAT CGGGTTCTAC 
GAGAAGGCCG TCCTTAAGAA CCCACAGGAT CCCTATTATC TCCTACGGAT CGCAGGCTGC 
TACCGCCGTA TCGGCAATCA GCAAAAGTCA CTGAACCTAT TCAAGATGAT CCACGAAATT 
TACCCGGAAA ACGTGGACTG CTTGCGGGCG TTGATCCATC TGACCCAGAC CCAGGGCAAC 
AACGAACTGT GCGAGCGGTA CATGAGTGAA CTGCAGAAGT TGGAGAAACA GAAAGAAGTT 
CGCCAACGGA TCAACACCAG TAGACCGCCA ACCACGGCGA GCAGTTCGCG AATCTCCAGC 
GGTGAGCACA GTGCTCGATC GGGTGCGGGT GGCGGAGGAT CGGACAGCTA TCAACCGCCG 
GGTACTGCAT CAGGGGGGAA CAAGAGTTCC GACGTATCAC CAGATTACAA CGCAAGTGCG 
TACGGCTATG CGGATCCTTT GGGACCTCCC CAAGAAAGAC CACGCACCGG AGTCCGCAAA 
AATCTTACGC TGGACGATGA TTCCGATGAG GATATAAATC CGTACGATTT GTTGCCGGTT 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Genome sequence of Aedes aegypti, a major arbovirus vector.
Science (New York, N.Y.)316(5832)1718-23(2007 Jun)
Nene V,Wortman JR,Lawson D,Haas B,Kodira C,Tu ZJ,Loftus B,Xi Z,Megy K,Grabherr M,Ren Q,Zdobnov EM,Lobo NF,Campbell KS,Brown SE,Bonaldo MF,Zhu J,Sinkins SP,Hogenkamp DG,Amedeo P,Arensburger P,Atkinson PW,Bidwell S,Biedler J,Birney E,Bruggner RV,Costas J,Coy MR,Crabtree J,Crawford M,Debruyn B,Decaprio D,Eiglmeier K,Eisenstadt E,El-Dorry H,Gelbart WM,Gomes SL,Hammond M,Hannick LI,Hogan JR,Holmes MH,Jaffe D,Johnston JS,Kennedy RC,Koo H,Kravitz S,Kriventseva EV,Kulp D,Labutti K,Lee E,Li S,Lovin DD,Mao C,Mauceli E,Menck CF,Miller JR,Montgomery P,Mori A,Nascimento AL,Naveira HF,Nusbaum C,O'leary S,Orvis J,Pertea M,Quesneville H,Reidenbach KR,Rogers YH,Roth CW,Schneider JR,Schatz M,Shumway M,Stanke M,Stinson EO,Tubio JM,Vanzee JP,Verjovski-Almeida S,Werner D,White O,Wyder S,Zeng Q,Zhao Q,Zhao Y,Hill CA,Raikhel AS,Soares MB,Knudson DL,Lee NH,Galagan J,Salzberg SL,Paulsen IT,Dimopoulos G,Collins FH,Birren B,Fraser-Liggett CM,Severson DW

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LOC5579976 cDNA ORF clone, Aedes aegypti(yellow fever mosquito)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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