LOC110488701 cDNA ORF clone, Oncorhynchus mykiss(rainbow trout)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC110488701
Entrez Gene ID	110488701
Full Name	protocadherin beta-16-like
Gene Type	protein-coding
Organism	Oncorhynchus mykiss(rainbow trout)

mRNA and Protein(s)

mRNA	Protein	Name
XM_021561013.1	XP_021416688.1	protocadherin beta-16-like

Pathways from BioSystems
Gene Ontology

The following LOC110488701 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC110488701 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OOf11940	XM_021561013.1 Latest version!	Oncorhynchus mykiss protocadherin beta-16-like (LOC110488701), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$629.30 $899.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC110488701 ( XM_021561013.1 ) cDNA ORF clone, Oncorhynchus mykiss(rainbow trout) -> XP_021416688.1 Oncorhynchus mykiss protocadherin beta-16-like (LOC110488701), mRNA.

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CloneID	OOf11940
Clone ID Related Accession (Same CDS sequence)	XM_021561013.1
Accession Version	XM_021561013.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3066bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-26
Organism	Oncorhynchus mykiss(rainbow trout)
Product	protocadherin beta-16-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_035090.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oncorhynchus mykiss Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGATTTTCT TGGGAAGCAT TGAGATGGAG CACAGGCTCA CGAGCACGCG GTGGACACCG 
TTAACCGGGC TGGTGGTGTG CCTGCTGGTG TGCGCGTGTG TGGTGGACCT GGTTCTGGCA 
CAGATTCGGT ACTCCATCCC CGAGGAGTTG GACCACGGGG CTTTTGTCGG TAACATCGCT 
GAGGACCTCG GTTTGGACGT GGCCAAACTG TCCGCCCGTC GCTTCCGGAT AGTCTCCGGT 
GCCAAGAAAC AGTACTTAGA GGTGAATCTG GAAAACGGTA TTTTATTTGT TAACGAGAAG 
ATCGACCGCG AGGAGCTGTG TGAACGGAGC CCGACCTGCT TCTTACACTT GCAAGTGGTG 
ATCGAGAATC CGTTAGAACT GTACAGAGTG GAGGTGGAGA TTTTGGATGT GAACGACAAC 
TCTCCCAGCT TCCCGTGGAG CGAGTTCAAT CTGGAGATTA CAGAGTCAGC GGCGCCCGGG 
TCCCGGTTCC CGTTGGAGAG CGCGCAGGAC CAGGACGTGG GCACCAACTC GCTCCGATCC 
TACCAGCTGA GCTCCAACGA GCACTTTGTA CTAAACATCC AGACACGTAA TGACGGGAGC 
AAGTTTGCCG AGCTCGTGCT GGGGACCCCG CTGGACAGGG AGCAGCAGAA GACGCACGAG 
ATGGTGCTCA CAGCCGTGGA CGGGGGGTCG CCAGAGCGTT CGGGCACGGC TCTCATCACC 
ATCACGGTGC TGGATGCCAA CGACAACGTG CCAGTTTTCG ACCGGTCTGT TTACCGGGCG 
AGCCTGGTAG AAAACGCACC GAGAGGGACT TTAGTGCTGA AGCTAAATGC CACTGATTTG 
GACGAGGGTG CGAACGGAGA GGTCTCATAC GCGTTCAGTG GGCACGCACC GCTCAAAGTG 
CGCGAGCTAT TCAGCGTGGA CCAGTATACG GGTGAGATCC GAGTGAAGGG GATTGTGGAC 
TATGAGAAAG CGAGTGTTTA TGAGCTGTAC GTGCAGGCTA AAGACAGGGG TCCCTCCGCA 
GTGGCCGTGC ACAGTAAGGT ACTGGTGGAT GTCTTAGATG TGAATGACAA CGCGCCGGAA 
GTCATCCTCA CCTCCGTGTC CACACCTGTC CAGGAAGACG CGCCACCGGG CACGGTGATA 
GCCGTTATAA GTGTCATGGA CCGGGACTCG GGAGAGAACG GGAATGTGGA CTGCCAGATC 
TCCAGCAACG TCCCCTTCCA GCTCCACTCC TCCTTTAAGA ACTACTACAC TCTGGTGACT 
AGCGAGTTTC TCGACAGAGA AGCCGTCTCC GAGTACAACA TCACCCTCAC GGCCCGGGAC 
CTGGGCTCCC CGTCTCTCTC CACGAGGAAA ACCATCCTCG TCCAAGTGTC TGATATTAAT 
GATAACCCCC CGCGCTTCGC ACAGCCATCA TACACAGTTT ATGTGACCGA GAATAATGCC 
CCGGGCGCAT TCATTTGCTC AGTCACTGCT TTCGACCCTG ATTCTAATCA GAACGCCTAT 
CTGTCCTACT CGATTCTAGA GGGTCAGATC CAAGGCATGC CCGTGTCCAC TTACGTCTCC 
ATCAACTCGG ACAACGGAAA CATTTATGCG CTGCGATCCT TTGACTACGA ACAGCTAAGG 
AACTTTCAGA TACGGGTGCA GGCGCAGGAC GCCGGTTTCC CTCCGCTCAG CAGCAATGTC 
ACGGTAAATG TGTTCGTTTT GGACCAGAAT GATAATGCTC CGGTTATCGT GTCCCCATTG 
CCCAAGAACG GGACCGTGGC GACAGAGGTA GTCCCGAGGT CAGTGGATGC GGGGCACTTA 
GTCGCCAAGA TCACTGCGCT AGATGCGGAC GCAGGACAGA ACTCGCGCCT CTCCTACCAG 
GTGCTCCAGG CTACGGACCC GGGGCTGGTC AGTGTCGCCC TCTACACGGG AGAAATAAGG 
ACGATTCGCC GGTTCGTGGA TAAGGACGCT ACGAGGCAGA GAGTCGTCAT TCTGGTCAAG 
GACAACGGGC AGCCGCCTCT CTCCGCCACC GTCTCTATCC TCCTCTCCGT GGTTGACAAT 
GTGCCGGAGT CCCTGTCTGA TTTCGGCGAC CTCACTCTGA GCCCCCAGCC CCCCTCCAAC 
CTCGCCCTCT ACTTGATCGT GTCACTGAGC ACCATCTCGC TAATCTTCCT GGTGGCTATT 
ATCGTCCTGG CTGCGGTCAA GTGTTACAAG GACAGAGAGA CCATCAGTGG GTATAACCTC 
CCCCCCTTCG CCTGCTGCTG TTGCGGGGGC TTCCAACCAG AGCCGCCCCC GGAGGTGTTC 
AAGAAATCTA ACCTAAACCT GCAGATCTCC ACCGGGGCGA AGGTGCCCAC CAACTGCATG 
GAGGTAAATG GCAACGGTAC TCTGTCCCAA GCCTACTGTT ATAAAGTATG TCTGACCCCC 
GAGTCAGCTA AGAGTGACTT TATGTTCCTG AAGCCATGCA GCCCCATTAG CACCCCGAGG 
AACAACGAGG CAAAGGGGGC TGATAACTTG GCTTGGAGCG CGCACCACCG GAGCTCATCG 
GTGAATAACC ATTCCGGAGC CACCACTCCA AATGAGCTCA AGCAACCAAA CACAGACTGG 
ACCCTCACAA AGAACCAGAA CTCCTCTTTG AAAAGCTGTA ACTCTATCAA CATGGATGGC 
ACTCTGATGA GGAAGGCCAT GCATGCAGAC CCAGAGAACT ACATGACACC CATGACTGGC 
CAGTACTGGA CCTGGGGCAC CCACATGAGG GACTACAAGA TGTCTCCTCC TGCCACTGGG 
CCTCCTCCTC GCTCTTGGAC CCCCCGGTGC ACCCCTCCAC CCCAGCAACA GCCCCAACCC 
CAGCAGCCTC CACTCCCGCC ACACCCTCAC CCCCACCCAC CTCCAGACTA CCAGCATAAC 
GTGTACATCC CGGGCACGCC GTCGGCTCTG TGCACCCTGA GGCCAGCAGC CACCCACCAC 
CGCAGCGAGC TGGACGTCCA CAACTCCTTC TCTACCTTTG GCAAGAAGAG ACGCTTCATC 
CACAACTACG AGGCCCAGAC AGACGCAGCA GCAGCTGTCA TCAACAATGA CCTGTATAAT 
GATTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_021416688.1
CDS	302..3367
Translation	MIFLGSIEMEHRLTSTRWTPLTGLVVCLLVCACVVDLVLAQIRYSIPEELDHGAFVGNIAEDLGLDVAKLSARRFRIVSGAKKQYLEVNLENGILFVNEKIDREELCERSPTCFLHLQVVIENPLELYRVEVEILDVNDNSPSFPWSEFNLEITESAAPGSRFPLESAQDQDVGTNSLRSYQLSSNEHFVLNIQTRNDGSKFAELVLGTPLDREQQKTHEMVLTAVDGGSPERSGTALITITVLDANDNVPVFDRSVYRASLVENAPRGTLVLKLNATDLDEGANGEVSYAFSGHAPLKVRELFSVDQYTGEIRVKGIVDYEKASVYELYVQAKDRGPSAVAVHSKVLVDVLDVNDNAPEVILTSVSTPVQEDAPPGTVIAVISVMDRDSGENGNVDCQISSNVPFQLHSSFKNYYTLVTSEFLDREAVSEYNITLTARDLGSPSLSTRKTILVQVSDINDNPPRFAQPSYTVYVTENNAPGAFICSVTAFDPDSNQNAYLSYSILEGQIQGMPVSTYVSINSDNGNIYALRSFDYEQLRNFQIRVQAQDAGFPPLSSNVTVNVFVLDQNDNAPVIVSPLPKNGTVATEVVPRSVDAGHLVAKITALDADAGQNSRLSYQVLQATDPGLVSVALYTGEIRTIRRFVDKDATRQRVVILVKDNGQPPLSATVSILLSVVDNVPESLSDFGDLTLSPQPPSNLALYLIVSLSTISLIFLVAIIVLAAVKCYKDRETISGYNLPPFACCCCGGFQPEPPPEVFKKSNLNLQISTGAKVPTNCMEVNGNGTLSQAYCYKVCLTPESAKSDFMFLKPCSPISTPRNNEAKGADNLAWSAHHRSSSVNNHSGATTPNELKQPNTDWTLTKNQNSSLKSCNSINMDGTLMRKAMHADPENYMTPMTGQYWTWGTHMRDYKMSPPATGPPPRSWTPRCTPPPQQQPQPQQPPLPPHPHPHPPPDYQHNVYIPGTPSALCTLRPAATHHRSELDVHNSFSTFGKKRRFIHNYEAQTDAAAAVINNDLYND

Target ORF information:

RefSeq Version	XM_021561013.1
Organism	Oncorhynchus mykiss(rainbow trout)
Definition	Oncorhynchus mykiss protocadherin beta-16-like (LOC110488701), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_021561013.1

ORF Insert Sequence:

ATGATTTTCT TGGGAAGCAT TGAGATGGAG CACAGGCTCA CGAGCACGCG GTGGACACCG 
TTAACCGGGC TGGTGGTGTG CCTGCTGGTG TGCGCGTGTG TGGTGGACCT GGTTCTGGCA 
CAGATTCGGT ACTCCATCCC CGAGGAGTTG GACCACGGGG CTTTTGTCGG TAACATCGCT 
GAGGACCTCG GTTTGGACGT GGCCAAACTG TCCGCCCGTC GCTTCCGGAT AGTCTCCGGT 
GCCAAGAAAC AGTACTTAGA GGTGAATCTG GAAAACGGTA TTTTATTTGT TAACGAGAAG 
ATCGACCGCG AGGAGCTGTG TGAACGGAGC CCGACCTGCT TCTTACACTT GCAAGTGGTG 
ATCGAGAATC CGTTAGAACT GTACAGAGTG GAGGTGGAGA TTTTGGATGT GAACGACAAC 
TCTCCCAGCT TCCCGTGGAG CGAGTTCAAT CTGGAGATTA CAGAGTCAGC GGCGCCCGGG 
TCCCGGTTCC CGTTGGAGAG CGCGCAGGAC CAGGACGTGG GCACCAACTC GCTCCGATCC 
TACCAGCTGA GCTCCAACGA GCACTTTGTA CTAAACATCC AGACACGTAA TGACGGGAGC 
AAGTTTGCCG AGCTCGTGCT GGGGACCCCG CTGGACAGGG AGCAGCAGAA GACGCACGAG 
ATGGTGCTCA CAGCCGTGGA CGGGGGGTCG CCAGAGCGTT CGGGCACGGC TCTCATCACC 
ATCACGGTGC TGGATGCCAA CGACAACGTG CCAGTTTTCG ACCGGTCTGT TTACCGGGCG 
AGCCTGGTAG AAAACGCACC GAGAGGGACT TTAGTGCTGA AGCTAAATGC CACTGATTTG 
GACGAGGGTG CGAACGGAGA GGTCTCATAC GCGTTCAGTG GGCACGCACC GCTCAAAGTG 
CGCGAGCTAT TCAGCGTGGA CCAGTATACG GGTGAGATCC GAGTGAAGGG GATTGTGGAC 
TATGAGAAAG CGAGTGTTTA TGAGCTGTAC GTGCAGGCTA AAGACAGGGG TCCCTCCGCA 
GTGGCCGTGC ACAGTAAGGT ACTGGTGGAT GTCTTAGATG TGAATGACAA CGCGCCGGAA 
GTCATCCTCA CCTCCGTGTC CACACCTGTC CAGGAAGACG CGCCACCGGG CACGGTGATA 
GCCGTTATAA GTGTCATGGA CCGGGACTCG GGAGAGAACG GGAATGTGGA CTGCCAGATC 
TCCAGCAACG TCCCCTTCCA GCTCCACTCC TCCTTTAAGA ACTACTACAC TCTGGTGACT 
AGCGAGTTTC TCGACAGAGA AGCCGTCTCC GAGTACAACA TCACCCTCAC GGCCCGGGAC 
CTGGGCTCCC CGTCTCTCTC CACGAGGAAA ACCATCCTCG TCCAAGTGTC TGATATTAAT 
GATAACCCCC CGCGCTTCGC ACAGCCATCA TACACAGTTT ATGTGACCGA GAATAATGCC 
CCGGGCGCAT TCATTTGCTC AGTCACTGCT TTCGACCCTG ATTCTAATCA GAACGCCTAT 
CTGTCCTACT CGATTCTAGA GGGTCAGATC CAAGGCATGC CCGTGTCCAC TTACGTCTCC 
ATCAACTCGG ACAACGGAAA CATTTATGCG CTGCGATCCT TTGACTACGA ACAGCTAAGG 
AACTTTCAGA TACGGGTGCA GGCGCAGGAC GCCGGTTTCC CTCCGCTCAG CAGCAATGTC 
ACGGTAAATG TGTTCGTTTT GGACCAGAAT GATAATGCTC CGGTTATCGT GTCCCCATTG 
CCCAAGAACG GGACCGTGGC GACAGAGGTA GTCCCGAGGT CAGTGGATGC GGGGCACTTA 
GTCGCCAAGA TCACTGCGCT AGATGCGGAC GCAGGACAGA ACTCGCGCCT CTCCTACCAG 
GTGCTCCAGG CTACGGACCC GGGGCTGGTC AGTGTCGCCC TCTACACGGG AGAAATAAGG 
ACGATTCGCC GGTTCGTGGA TAAGGACGCT ACGAGGCAGA GAGTCGTCAT TCTGGTCAAG 
GACAACGGGC AGCCGCCTCT CTCCGCCACC GTCTCTATCC TCCTCTCCGT GGTTGACAAT 
GTGCCGGAGT CCCTGTCTGA TTTCGGCGAC CTCACTCTGA GCCCCCAGCC CCCCTCCAAC 
CTCGCCCTCT ACTTGATCGT GTCACTGAGC ACCATCTCGC TAATCTTCCT GGTGGCTATT 
ATCGTCCTGG CTGCGGTCAA GTGTTACAAG GACAGAGAGA CCATCAGTGG GTATAACCTC 
CCCCCCTTCG CCTGCTGCTG TTGCGGGGGC TTCCAACCAG AGCCGCCCCC GGAGGTGTTC 
AAGAAATCTA ACCTAAACCT GCAGATCTCC ACCGGGGCGA AGGTGCCCAC CAACTGCATG 
GAGGTAAATG GCAACGGTAC TCTGTCCCAA GCCTACTGTT ATAAAGTATG TCTGACCCCC 
GAGTCAGCTA AGAGTGACTT TATGTTCCTG AAGCCATGCA GCCCCATTAG CACCCCGAGG 
AACAACGAGG CAAAGGGGGC TGATAACTTG GCTTGGAGCG CGCACCACCG GAGCTCATCG 
GTGAATAACC ATTCCGGAGC CACCACTCCA AATGAGCTCA AGCAACCAAA CACAGACTGG 
ACCCTCACAA AGAACCAGAA CTCCTCTTTG AAAAGCTGTA ACTCTATCAA CATGGATGGC 
ACTCTGATGA GGAAGGCCAT GCATGCAGAC CCAGAGAACT ACATGACACC CATGACTGGC 
CAGTACTGGA CCTGGGGCAC CCACATGAGG GACTACAAGA TGTCTCCTCC TGCCACTGGG 
CCTCCTCCTC GCTCTTGGAC CCCCCGGTGC ACCCCTCCAC CCCAGCAACA GCCCCAACCC 
CAGCAGCCTC CACTCCCGCC ACACCCTCAC CCCCACCCAC CTCCAGACTA CCAGCATAAC 
GTGTACATCC CGGGCACGCC GTCGGCTCTG TGCACCCTGA GGCCAGCAGC CACCCACCAC 
CGCAGCGAGC TGGACGTCCA CAACTCCTTC TCTACCTTTG GCAAGAAGAG ACGCTTCATC 
CACAACTACG AGGCCCAGAC AGACGCAGCA GCAGCTGTCA TCAACAATGA CCTGTATAAT 
GATTAA