LOC103342917 cDNA ORF clone, Prunus mume(Japanese apricot)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC103342917
Entrez Gene ID	103342917
Full Name	putative pentatricopeptide repeat-containing protein At3g08820
Gene Type	protein-coding
Organism	Prunus mume(Japanese apricot)

mRNA and Protein(s)

mRNA	Protein	Name
XM_008246583.2	XP_008244805.1	putative pentatricopeptide repeat-containing protein At3g08820

Pathways from BioSystems
Gene Ontology

The following LOC103342917 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC103342917 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPr42376	XM_008246583.2 Latest version!	Prunus mume putative pentatricopeptide repeat-containing protein At3g08820 (LOC103342917), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC103342917 ( XM_008246583.2 ) cDNA ORF clone, Prunus mume(Japanese apricot) -> XP_008244805.1 Prunus mume putative pentatricopeptide repeat-containing protein At3g08820 (LOC103342917), mRNA.

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CloneID	OPr42376
Clone ID Related Accession (Same CDS sequence)	XM_008246583.2
Accession Version	XM_008246583.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2067bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-05-10
Organism	Prunus mume(Japanese apricot)
Product	putative pentatricopeptide repeat-containing protein At3g08820
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_007362511.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 11, 2016 this sequence version replaced XM_008246583.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Prunus mume Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACAGTCT TGCCCAACAG AGCCTTCCCT GTACTTTCTA AAGCTTTGGA GACCAAGCAA 
TGCCTTCTTC AAGGTTTCAA CTCCTTCAAG CACCTCAAGC ATGCCCACGC TCGGCTTCTC 
CGCCTTGGTC TCGACCAAGA CAACTATCTT CTCAACGTGG TCTTGCGCTC TGGCTTCGAT 
TTTGGGCACG CCAGCTACTC CCGCCTCGTC TTCCGCCAAA CTACGCAACC CAATATATTT 
CTTTGGAATA CCATGATTCG TGGCCTGGTT TCCGACGATT GCTTCGACGA TGCTATCGAA 
TTCTTTAGTT CTATGCGAAC AGAGGGGATC TTGCCCAATA GCTTCACCTT CCCTTTTGTT 
TTGAAAGCTT GTGCTAGGCG TTCGGATTTT CAATTGGGTT TGAACATTCA TACCCTTGTG 
GTGAAAACGG GGTTCGATTT TGATGTTTAT GTTAAAACTA GTTTGCTGTA CTTGTATGCA 
AAGTGCGGCT ATTTGGAACA TGCCCATAAG GTTTTCGATG ATATTCCCGA CAAGAATGTG 
GTTTCTTGGA CTGCCATCAT TTGTGGGTAC ATTGGAGCTG GTCAATATAG AGAAGCTATT 
GATACGTTTC GCAGGTTGCT GGAGATGGGT TTGAGGCCTG ATAGTTTTAG CCTTGTTCGG 
GTTTTATCTG CGTGCGGCAA GTTAGGAGAT TTAAGCAGTG GGGAGTGGAT AGATAGATAC 
ATAACTGAGA TTGGCATGGG AAAGAATGTG TTTGTGGCCA CGTCTTTAGT TGATTTGTAT 
GCCAAGTGTG GACAGATGGA AAAGGCGCGG GGTATCTTCG ATGGAATGCT TGAGAAGGAT 
ATAGTATCTT GGAGTAGTAT GATTCAGGGA TATGCATCAA ATGGACTTCC AAAAGAAGCC 
ATAGACCTCT TCTTTCAAAT GCAGAAGGAA AATTTGAAAC CTGATTGTTA TGCCATGGTT 
GGGGTGCTTT CTGCTTGTGC AAGATTAGGA GCCCTGGAAC TAGGGGAGTG GGCTAGCAAT 
TTGATGGATA AACATGAATT TTTTGTGAAC CCTGTTCTTG GTACAGCTCT GATTGACATG 
TATGCCAAAT GTGGGTGCAT GATTCAAGCT TGGGAAGTCT TTAAAGGGAT GAAGAAAAGA 
GACCATGTGG TTTGGAATGC TGCAATGTCT GGGCTTGCCA TGAATGGACA TGTCAAAACT 
GTGTTTGGAC TGTTCGGACA AGTTGAGAAA AATGGAATTC GACCTGATGG GAACACATTC 
ATGGGGCTGC TTTGTGGGTG TTCTCATGCT GGTCTCGTTG ACGAGGGTCG TAGGTATTTC 
AACAACATGA CTAGTGCCTT TTCTTTGGCT CCTACAATTG AGCATTATGG ATGCATGGTG 
GATCTTCTTA GTCGTGCTGA CTTGTTGGAT GAAGCTTATA ACCTAATCAA AACTATGCCG 
ATGAAGGCTA ATTCAGTCGT TTGGGGAGCG TTGTTGGGTG GATGCAGGCT ACATCGGCAA 
ACCCAATTGG CTGAACTCGT ACTGAAACAA CTCATTGAGC TAGAACCATG GAACTCAGCA 
CACTATGTTC TCCTGTCAAA TATTTACTCT GCAAGCCATA AATGGGATGA GGCAGCAGAC 
ACTAGGTCAA GAATGAATGA ACAAGGGATG AAGAAAATCC CCGGTTGTAG TTGGATCGAA 
GTAAAGGGGG TTGTTCACGA ATTCCTTGTC GGAGACAAGT CCCATGCATT GTCAGAGAAG 
ATATACGCAA AGCTCGACGA GTTGGCTAAG GAACTGAAAG CAGTAGGTTA TGTTCCAACC 
ACAGACTTTG TGTTGTTTGA CATAGAAGAG GAGGAGAAGG AGCACTTCCT TGGTTGTCAC 
AGTGAGAAGC TGGCCATTGC ATTTGGTCTC ATAAGCACTG CTCCTAAAGA TACAATTCGA 
GTTGTGAAGA ACCTTCGTGT ATGCGGCGAT TGCCATGAGG CTATCAAGCT CATCTCAAAG 
ATTACAGAGA GACAGATCAT TGTCCGGGAT AACAACCGAT TTCATTGTTT CATTGATGGT 
TATTGTTCAT GTAAAGATTA TTGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008244805.1
CDS	40..2106
Translation	MTVLPNRAFPVLSKALETKQCLLQGFNSFKHLKHAHARLLRLGLDQDNYLLNVVLRSGFDFGHASYSRLVFRQTTQPNIFLWNTMIRGLVSDDCFDDAIEFFSSMRTEGILPNSFTFPFVLKACARRSDFQLGLNIHTLVVKTGFDFDVYVKTSLLYLYAKCGYLEHAHKVFDDIPDKNVVSWTAIICGYIGAGQYREAIDTFRRLLEMGLRPDSFSLVRVLSACGKLGDLSSGEWIDRYITEIGMGKNVFVATSLVDLYAKCGQMEKARGIFDGMLEKDIVSWSSMIQGYASNGLPKEAIDLFFQMQKENLKPDCYAMVGVLSACARLGALELGEWASNLMDKHEFFVNPVLGTALIDMYAKCGCMIQAWEVFKGMKKRDHVVWNAAMSGLAMNGHVKTVFGLFGQVEKNGIRPDGNTFMGLLCGCSHAGLVDEGRRYFNNMTSAFSLAPTIEHYGCMVDLLSRADLLDEAYNLIKTMPMKANSVVWGALLGGCRLHRQTQLAELVLKQLIELEPWNSAHYVLLSNIYSASHKWDEAADTRSRMNEQGMKKIPGCSWIEVKGVVHEFLVGDKSHALSEKIYAKLDELAKELKAVGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISTAPKDTIRVVKNLRVCGDCHEAIKLISKITERQIIVRDNNRFHCFIDGYCSCKDYW

Target ORF information:

RefSeq Version	XM_008246583.2
Organism	Prunus mume(Japanese apricot)
Definition	Prunus mume putative pentatricopeptide repeat-containing protein At3g08820 (LOC103342917), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008246583.2

ORF Insert Sequence:

ATGACAGTCT TGCCCAACAG AGCCTTCCCT GTACTTTCTA AAGCTTTGGA GACCAAGCAA 
TGCCTTCTTC AAGGTTTCAA CTCCTTCAAG CACCTCAAGC ATGCCCACGC TCGGCTTCTC 
CGCCTTGGTC TCGACCAAGA CAACTATCTT CTCAACGTGG TCTTGCGCTC TGGCTTCGAT 
TTTGGGCACG CCAGCTACTC CCGCCTCGTC TTCCGCCAAA CTACGCAACC CAATATATTT 
CTTTGGAATA CCATGATTCG TGGCCTGGTT TCCGACGATT GCTTCGACGA TGCTATCGAA 
TTCTTTAGTT CTATGCGAAC AGAGGGGATC TTGCCCAATA GCTTCACCTT CCCTTTTGTT 
TTGAAAGCTT GTGCTAGGCG TTCGGATTTT CAATTGGGTT TGAACATTCA TACCCTTGTG 
GTGAAAACGG GGTTCGATTT TGATGTTTAT GTTAAAACTA GTTTGCTGTA CTTGTATGCA 
AAGTGCGGCT ATTTGGAACA TGCCCATAAG GTTTTCGATG ATATTCCCGA CAAGAATGTG 
GTTTCTTGGA CTGCCATCAT TTGTGGGTAC ATTGGAGCTG GTCAATATAG AGAAGCTATT 
GATACGTTTC GCAGGTTGCT GGAGATGGGT TTGAGGCCTG ATAGTTTTAG CCTTGTTCGG 
GTTTTATCTG CGTGCGGCAA GTTAGGAGAT TTAAGCAGTG GGGAGTGGAT AGATAGATAC 
ATAACTGAGA TTGGCATGGG AAAGAATGTG TTTGTGGCCA CGTCTTTAGT TGATTTGTAT 
GCCAAGTGTG GACAGATGGA AAAGGCGCGG GGTATCTTCG ATGGAATGCT TGAGAAGGAT 
ATAGTATCTT GGAGTAGTAT GATTCAGGGA TATGCATCAA ATGGACTTCC AAAAGAAGCC 
ATAGACCTCT TCTTTCAAAT GCAGAAGGAA AATTTGAAAC CTGATTGTTA TGCCATGGTT 
GGGGTGCTTT CTGCTTGTGC AAGATTAGGA GCCCTGGAAC TAGGGGAGTG GGCTAGCAAT 
TTGATGGATA AACATGAATT TTTTGTGAAC CCTGTTCTTG GTACAGCTCT GATTGACATG 
TATGCCAAAT GTGGGTGCAT GATTCAAGCT TGGGAAGTCT TTAAAGGGAT GAAGAAAAGA 
GACCATGTGG TTTGGAATGC TGCAATGTCT GGGCTTGCCA TGAATGGACA TGTCAAAACT 
GTGTTTGGAC TGTTCGGACA AGTTGAGAAA AATGGAATTC GACCTGATGG GAACACATTC 
ATGGGGCTGC TTTGTGGGTG TTCTCATGCT GGTCTCGTTG ACGAGGGTCG TAGGTATTTC 
AACAACATGA CTAGTGCCTT TTCTTTGGCT CCTACAATTG AGCATTATGG ATGCATGGTG 
GATCTTCTTA GTCGTGCTGA CTTGTTGGAT GAAGCTTATA ACCTAATCAA AACTATGCCG 
ATGAAGGCTA ATTCAGTCGT TTGGGGAGCG TTGTTGGGTG GATGCAGGCT ACATCGGCAA 
ACCCAATTGG CTGAACTCGT ACTGAAACAA CTCATTGAGC TAGAACCATG GAACTCAGCA 
CACTATGTTC TCCTGTCAAA TATTTACTCT GCAAGCCATA AATGGGATGA GGCAGCAGAC 
ACTAGGTCAA GAATGAATGA ACAAGGGATG AAGAAAATCC CCGGTTGTAG TTGGATCGAA 
GTAAAGGGGG TTGTTCACGA ATTCCTTGTC GGAGACAAGT CCCATGCATT GTCAGAGAAG 
ATATACGCAA AGCTCGACGA GTTGGCTAAG GAACTGAAAG CAGTAGGTTA TGTTCCAACC 
ACAGACTTTG TGTTGTTTGA CATAGAAGAG GAGGAGAAGG AGCACTTCCT TGGTTGTCAC 
AGTGAGAAGC TGGCCATTGC ATTTGGTCTC ATAAGCACTG CTCCTAAAGA TACAATTCGA 
GTTGTGAAGA ACCTTCGTGT ATGCGGCGAT TGCCATGAGG CTATCAAGCT CATCTCAAAG 
ATTACAGAGA GACAGATCAT TGTCCGGGAT AACAACCGAT TTCATTGTTT CATTGATGGT 
TATTGTTCAT GTAAAGATTA TTGGTGA