| Gene Symbol | SOX9 |
| Entrez Gene ID | 396840 |
| Full Name | SRY-box 9 |
| Synonyms | SOX-9 |
| Gene Type | protein-coding |
| Organism | Sus scrofa(pig) |
| Genome |
ORF » Species Summary » Sus scrofa » SOX9 cDNA ORF clone
| Gene Symbol | SOX9 |
| Entrez Gene ID | 396840 |
| Full Name | SRY-box 9 |
| Synonyms | SOX-9 |
| Gene Type | protein-coding |
| Organism | Sus scrofa(pig) |
| Genome |
| mRNA | Protein | Name |
|---|---|---|
| NM_213843.2 | NP_999008.2 | transcription factor SOX-9 |
Porcine SOX9 Gene Expression Is Influenced by an 18 bp Indel in the 5'-Untranslated Region.
Brenig B, Duan Y, Xing Y, Ding N, Huang L, Sch?tz E
PloS one10(10)e0139583(2015)
Hypoxia-inducible factor-1 is a positive regulator of Sox9 activity in femoral head osteonecrosis.
Zhang C, Yang F, Cornelia R, Tang W, Swisher S, Kim H
Bone48(3)507-13(2011 Mar)
SOX9, through interaction with microphthalmia-associated transcription factor (MITF) and OTX2, regulates BEST1 expression in the retinal pigment epithelium.
Masuda T, Esumi N
The Journal of biological chemistry285(35)26933-44(2010 Aug)
Porcine SRY promoter is a target for steroidogenic factor 1.
Pilon N, Daneau I, Paradis V, Hamel F, Lussier JG, Viger RS, Silversides DW
Biology of reproduction68(4)1098-106(2003 Apr)
The porcine SRY promoter is transactivated within a male genital ridge environment.
Daneau I, Pilon N, Boyer A, Behdjani R, Overbeek PA, Viger R, Lussier J, Silversides DW
Genesis (New York, N.Y. : 2000)33(4)170-80(2002 Aug)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
data presented here demonstrate that the 18 bp indel in the porcine SOX9 5'-UTR is of functional importance and may therefore indeed be a causative variation in SOX9 associated traits
Title: Porcine SOX9 Gene Expression Is Influenced by an 18 bp Indel in the 5'-Untranslated Region.
HIF-1alpha activates Sox9 expression and enhances Sox9-mediated transcriptional activity.
Title: Hypoxia-inducible factor-1 is a positive regulator of Sox9 activity in femoral head osteonecrosis.
The following SOX9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SOX9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OSe101249 | |
| Clone ID Related Accession (Same CDS sequence) | NM_213843.2 | |
| Accession Version | NM_213843.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1536bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-02-22 | |
| Organism | Sus scrofa(pig) | |
| Product | transcription factor SOX-9 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CU640384.2 and DN126542.1. On Feb 23, 2017 this sequence version replaced NM_213843.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AF029696.1, BX926928.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN02584787, SAMN02584789 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. | |
1 | ATGAATCTCC TGGACCCCTT CATGAAGATG ACCGACGAGC AGGAGAAGGG CCTGTCCGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_999008.2 |
| CDS | 4..1539 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_213843.2 |
1 | ATGAATCTCC TGGACCCCTT CATGAAGATG ACCGACGAGC AGGAGAAGGG CCTGTCCGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Porcine SOX9 Gene Expression Is Influenced by an 18 bp Indel in the 5'-Untranslated Region. |
Hypoxia-inducible factor-1 is a positive regulator of Sox9 activity in femoral head osteonecrosis. |
SOX9, through interaction with microphthalmia-associated transcription factor (MITF) and OTX2, regulates BEST1 expression in the retinal pigment epithelium. |
Porcine SRY promoter is a target for steroidogenic factor 1. |
The porcine SRY promoter is transactivated within a male genital ridge environment. |