Btbd11 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Btbd11
Entrez Gene ID	314675
Full Name	BTB domain containing 11
General protein information	Preferred Names BTB domain containing 11 Names ankyrin repeat and BTB/POZ domain-containing protein BTBD11 LOW QUALITY PROTEIN: ankyrin repeat and BTB/POZ domain-containing protein BTBD11 BTB (POZ) domain containing 11
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 7 Map Location: 7q13

mRNA and Protein(s)

mRNA	Protein	Name
XM_008765291.2	XP_008763513.2	ankyrin repeat and BTB/POZ domain-containing protein BTBD11 isoform X1
XM_017603335.1	XP_017458824.1	LOW QUALITY PROTEIN: ankyrin repeat and BTB/POZ domain-containing protein BTBD11 isoform X2

Pathways from BioSystems

Homologies

Homo sapiens (human)	BTBD11	NP_001018082.1
Pan troglodytes (chimpanzee)	BTBD11	XP_003313954.1
Bos taurus (cattle)	BTBD11	NP_001192674.1
Gallus gallus (chicken)	BTBD11	XP_001234771.3
Danio rerio (zebrafish)	btbd11b	XP_003200483.1
	BTBD11	XP_001093296.2
Mus musculus (house mouse)	Btbd11	NP_082985.2
Canis lupus familiaris (dog)	BTBD11	XP_850942.1
Rattus norvegicus (Norway rat)	Btbd11	XP_006241235.1
Xenopus tropicalis (tropical clawed frog)	btbd11	XP_002938736.2

Gene Ontology

The following Btbd11 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Btbd11 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa55707	XM_017603335.1 Latest version!	Rattus norvegicus BTB domain containing 11 (Btbd11), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00
ORa62234	XM_008765291.2 Latest version!	Rattus norvegicus BTB domain containing 11 (Btbd11), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Btbd11 ( XM_017603335.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017458824.1 Rattus norvegicus BTB domain containing 11 (Btbd11), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ORa55707
Clone ID Related Accession (Same CDS sequence)	XM_017603335.1
Accession Version	XM_017603335.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3213bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	LOW QUALITY PROTEIN: ankyrin repeat and BTB/POZ domain-containing protein BTBD11 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (AC_000075.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases internal stop codons :: corrected 1 genomic stop codon ##RefSeq-Attributes-END##

ATGGCCAGGA GAGGTAAGAA GCCGGTGGTG CGAACGCTGG AAGATCTGAC GCTGGACTCG 
GGTTATGGTG GCGCGGCGGA CTCTGTGCGC TCCTCCAACT TGTCTCTGTG CTGTTCTGAC 
TCGCACCCGG CGTCCCCGTA TGGCGGGAGC TGCTGGCCGC CTCTAGCTGA CTCCATGCAC 
AGCCGGCACA ACAGCTTTGA TACCGTCAAC ACTGCCCTGG TGGAAGACTC CGAGGGGCTG 
GACTGCGCCG GTCAGCACTG CTCGCGGTTG CTGCCGGACC TCGACGAGGT CCCCTGGACC 
CTCCAGGAAC TGGAGTTGCT GCTGCTGCGC TCGCGGGATC CTCGGGCAGG CCCAGCAGCC 
CCCGGCAGCC TGCCCAAGGA CGCGCTGGCC AAGCTCTCGA TGCTGGTAAG CCGGGCTCTG 
GTGCGCATCG CTAAAGAGGC GCAGCGCCTG AGCCTGCGCT TCGCCAAGTG CACCAAGTAC 
GAGGTCCAGA GTGCTATGGA GATCGTCCTG TCCTGGGGCC TGGCGGCTCG TTGCACCGCT 
GCCGCGCTGG CCGCGCTGTC TCTCTATAAC ATGAGCAGTG CTGGCGGCGA CCGCTTGGGC 
CGTGGCAAGT CGGCTCGCTG CGGCCTCACC TTCTCCGTGG GCCGCGTGTA CCGCTGGATG 
GTGGACAGCC GCGTGGCGCT GCGCATCCAC GAGCATGCCG CCATCTACCT GACCGCCTGT 
ATGGAGAGTC TCTTTCGGGA CATCTACACA CGGGTGTTGG CCTCCGGGCT ACCTCGTAGC 
TGTAGCGGTC CCGGCCCTGG CTCCAGCTCC AGTTCTGGCC CAGGCCCCGG CTCAGGCCCG 
GGTGCCCCTA CAGCGGATAA GGAGCGCGAG ACGCCGGGAG GGGGAGCGGC GAGCGACACG 
CTTCACGAAG CGCCCAAATT CACCGTGGAG ACCCTGGAGC ACACGGTCAA CAACGATTCA 
GAAATCTGGG GGCTCTTGCA GCCCTACCAG CACCTCATCT GTGGGAAGAA CGCCAGCGGT 
GTGCTGAGCC TTCCAGAGAG CTTGAACCTG CACCGAGACC CACAGCGCCC CAGCAAGCCG 
GGAGAGCTAC CCATGTTCAG CCAGTCGGAG CTGAGGACTA TCGAGCAGTC CCTGCTGGCC 
ACACGGGTGG GCAGCATCGC CGAGCTCAGT GATCTTGTGT CCCGGGCGAT GCACCATCTA 
CAGCCCCTCA ATGTGAAACA CCATGGCAAT GGTACTCCCC TGCACCACAA GCAGGGGGCG 
CTCTACTGGG AGCCGGAGGC CCTGTACACG CTCTGCTACT TCATGCACTG CCCGCAAATG 
GAGTGGGAAA ATCCCAACGT GGAACCTTCC AAGGTCAACC TCCAGGTGGA AAGGCCCTTC 
CTCGTGCTGC CCCCTCTGAT GGAGTGGATC CGAGTGGCCG TGGCGCACGC TGGCCACCGC 
CGCAGCTTTT CTATGGACAG CGACGATGTC CGCCAAGCCG CCAGGCTTCT GTTGCCTGGA 
GTGGACTGCG AGCCGCGCCA GCTCAAGGCG GACGACTGCT TTTGCGCTTC TCGGAAGCTG 
GACGCAGTGG CCATCGAAGC CAAGTTCAAG CAGGACTTGG GCTTCCGGAT GCTGAACTGT 
GGACGGACCG ACCTGGTGAA GCAGGCAGTG TCTTTGCTGG GGCCGGATGG AATCAACACC 
ATGAGCGAAC AGGGCATGAC CCCCTTGATG TACGCCTGCG TCCGTGGGGA CGAGGCGATG 
GTGCAGATGC TGCTGGATGC CGGAGCTGAC CTGAATGTGG AGGTTGTCAG TTCTCCTCAT 
AAATATCCAT CCGTCCACCC CGAGACCCGC CATTGGACGG CTCTGACTTT TGCTGTGTTA 
CATGGACATA TTCCTGTAGT TCAGCTCCTC CTGGACGCTG GGGCCAAGGT GGAAGGCTCG 
GTGGAACATG GCGAGGAGAA CTATTCAGAA ACTCCTCTCC AACTCGCAGC GGCTGTTGGA 
AATTTTGAGC TGGTTAGCTT GCTGTTGGAG CGTGGTGCGG ATCCCCTGAT AGGAACCATG 
TACAGGAATG GAATTTCCAC AACCCCCCAG GGTGATATGA ACTCTTTCAG CCAGGCCGCA 
GCCCATGGAC ACAGGAATGT GTTCCGCAAA CTCCTCGCTC AGCCAGAGAA GGAGAAGAGT 
GATATCCTGT CCCTGGAGGA GATTCTGGCT GAGGGGACTG ACCTGGCAGA AACAGCCCCG 
CCCCCCTTGT GTGCCAGCCG CAACAGCAAG GCCAAACTGA GGGCCCTGAG GGAGGCCATG 
TATCACAGCG CTGAGCACGG CTACGTGGAT GTCACAATTG ATATCAGGAG TATAGTGATA 
GTTTAGGTGC GCCCGCCCTG GACTCTGCAC ACGTGGCTGG AGTCACTCCG GATTGCTTTC 
CAGCAGCACC GCAGGCCCCT CATCCAGTGT TTGCTCAAGG AGTTCAAGAC TATTCAAGAA 
GAGGAGTACA CAGAGGAGCT CGTCACCCAA GGCCTGCCCC TGATGTTCGA GATCTTAAAA 
GCAAGCAAGA ATGAAGTGAT CAGCCAGCAG CTGTGCGTCA TCTTCACACA CTGTTATGGT 
CCCTACCCCA TTCCCAAGCT CACAGAGATC AAGAGGAAGC AGACGTCACG CCTGGACCCT 
CATTTTCTGA ACAATAAAGA GATGTCTGAC GTGACCTTTC TGGTAGAGGG GAGGCCTTTC 
TACGCTCACA AAGTGCTGTT GTTTACAGCC TCTCCCAGGT TCAAGGCCCT CCTCTCCAGC 
AAGCCAACGA ACGACAGCAC CTGCGTAGAG ATTGGCTACG TGAAGTACCC CATTTTCCAG 
CTGGTCATGC AGTATCTCTA CTACGGTGGC CCAGAGTCAC TTCTCATTAA AAACAATGAG 
ATCATGGAGC TTCTGTCTGC CGCTAAGTTT TTCCAGCTGG AGGCTCTGCA GCGACACTGT 
GAGATTATCT GTGCAAAAAG CGTCAATACT GACAACTGTG TGGATATCTA CAGCCATGCC 
AAGTTCCTTG GGGTGACGGA GCTCTCAGCA TACTGTGAAG GCTACTTTCT TAAAAATATG 
ATGGTCCTCA TTGAAAATGA AGCATTCAAG CAGCTCCTGT ATGACAAAAA TGGCGAAGGG 
ACCGGCCAGG ATGTGCTTCA GGACTTACAG AGGACGTTGG CCATTAGGAT TCAGTCCATC 
CACCTGTCGT CTTCCAAGGG TTCTGTGGTA TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017458824.1
CDS	534..3746
Translation	MARRGKKPVVRTLEDLTLDSGYGGAADSVRSSNLSLCCSDSHPASPYGGSCWPPLADSMHSRHNSFDTVNTALVEDSEGLDCAGQHCSRLLPDLDEVPWTLQELELLLLRSRDPRAGPAAPGSLPKDALAKLSMLVSRALVRIAKEAQRLSLRFAKCTKYEVQSAMEIVLSWGLAARCTAAALAALSLYNMSSAGGDRLGRGKSARCGLTFSVGRVYRWMVDSRVALRIHEHAAIYLTACMESLFRDIYTRVLASGLPRSCSGPGPGSSSSSGPGPGSGPGAPTADKERETPGGGAASDTLHEAPKFTVETLEHTVNNDSEIWGLLQPYQHLICGKNASGVLSLPESLNLHRDPQRPSKPGELPMFSQSELRTIEQSLLATRVGSIAELSDLVSRAMHHLQPLNVKHHGNGTPLHHKQGALYWEPEALYTLCYFMHCPQMEWENPNVEPSKVNLQVERPFLVLPPLMEWIRVAVAHAGHRRSFSMDSDDVRQAARLLLPGVDCEPRQLKADDCFCASRKLDAVAIEAKFKQDLGFRMLNCGRTDLVKQAVSLLGPDGINTMSEQGMTPLMYACVRGDEAMVQMLLDAGADLNVEVVSSPHKYPSVHPETRHWTALTFAVLHGHIPVVQLLLDAGAKVEGSVEHGEENYSETPLQLAAAVGNFELVSLLLERGADPLIGTMYRNGISTTPQGDMNSFSQAAAHGHRNVFRKLLAQPEKEKSDILSLEEILAEGTDLAETAPPPLCASRNSKAKLRALREAMYHSAEHGYVDVTIDIRSIVIV*VRPPWTLHTWLESLRIAFQQHRRPLIQCLLKEFKTIQEEEYTEELVTQGLPLMFEILKASKNEVISQQLCVIFTHCYGPYPIPKLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYAHKVLLFTASPRFKALLSSKPTNDSTCVEIGYVKYPIFQLVMQYLYYGGPESLLIKNNEIMELLSAAKFFQLEALQRHCEIICAKSVNTDNCVDIYSHAKFLGVTELSAYCEGYFLKNMMVLIENEAFKQLLYDKNGEGTGQDVLQDLQRTLAIRIQSIHLSSSKGSVV

Target ORF information:

RefSeq Version	XM_017603335.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus BTB domain containing 11 (Btbd11), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017603335.1

ORF Insert Sequence:

ATGGCCAGGA GAGGTAAGAA GCCGGTGGTG CGAACGCTGG AAGATCTGAC GCTGGACTCG 
GGTTATGGTG GCGCGGCGGA CTCTGTGCGC TCCTCCAACT TGTCTCTGTG CTGTTCTGAC 
TCGCACCCGG CGTCCCCGTA TGGCGGGAGC TGCTGGCCGC CTCTAGCTGA CTCCATGCAC 
AGCCGGCACA ACAGCTTTGA TACCGTCAAC ACTGCCCTGG TGGAAGACTC CGAGGGGCTG 
GACTGCGCCG GTCAGCACTG CTCGCGGTTG CTGCCGGACC TCGACGAGGT CCCCTGGACC 
CTCCAGGAAC TGGAGTTGCT GCTGCTGCGC TCGCGGGATC CTCGGGCAGG CCCAGCAGCC 
CCCGGCAGCC TGCCCAAGGA CGCGCTGGCC AAGCTCTCGA TGCTGGTAAG CCGGGCTCTG 
GTGCGCATCG CTAAAGAGGC GCAGCGCCTG AGCCTGCGCT TCGCCAAGTG CACCAAGTAC 
GAGGTCCAGA GTGCTATGGA GATCGTCCTG TCCTGGGGCC TGGCGGCTCG TTGCACCGCT 
GCCGCGCTGG CCGCGCTGTC TCTCTATAAC ATGAGCAGTG CTGGCGGCGA CCGCTTGGGC 
CGTGGCAAGT CGGCTCGCTG CGGCCTCACC TTCTCCGTGG GCCGCGTGTA CCGCTGGATG 
GTGGACAGCC GCGTGGCGCT GCGCATCCAC GAGCATGCCG CCATCTACCT GACCGCCTGT 
ATGGAGAGTC TCTTTCGGGA CATCTACACA CGGGTGTTGG CCTCCGGGCT ACCTCGTAGC 
TGTAGCGGTC CCGGCCCTGG CTCCAGCTCC AGTTCTGGCC CAGGCCCCGG CTCAGGCCCG 
GGTGCCCCTA CAGCGGATAA GGAGCGCGAG ACGCCGGGAG GGGGAGCGGC GAGCGACACG 
CTTCACGAAG CGCCCAAATT CACCGTGGAG ACCCTGGAGC ACACGGTCAA CAACGATTCA 
GAAATCTGGG GGCTCTTGCA GCCCTACCAG CACCTCATCT GTGGGAAGAA CGCCAGCGGT 
GTGCTGAGCC TTCCAGAGAG CTTGAACCTG CACCGAGACC CACAGCGCCC CAGCAAGCCG 
GGAGAGCTAC CCATGTTCAG CCAGTCGGAG CTGAGGACTA TCGAGCAGTC CCTGCTGGCC 
ACACGGGTGG GCAGCATCGC CGAGCTCAGT GATCTTGTGT CCCGGGCGAT GCACCATCTA 
CAGCCCCTCA ATGTGAAACA CCATGGCAAT GGTACTCCCC TGCACCACAA GCAGGGGGCG 
CTCTACTGGG AGCCGGAGGC CCTGTACACG CTCTGCTACT TCATGCACTG CCCGCAAATG 
GAGTGGGAAA ATCCCAACGT GGAACCTTCC AAGGTCAACC TCCAGGTGGA AAGGCCCTTC 
CTCGTGCTGC CCCCTCTGAT GGAGTGGATC CGAGTGGCCG TGGCGCACGC TGGCCACCGC 
CGCAGCTTTT CTATGGACAG CGACGATGTC CGCCAAGCCG CCAGGCTTCT GTTGCCTGGA 
GTGGACTGCG AGCCGCGCCA GCTCAAGGCG GACGACTGCT TTTGCGCTTC TCGGAAGCTG 
GACGCAGTGG CCATCGAAGC CAAGTTCAAG CAGGACTTGG GCTTCCGGAT GCTGAACTGT 
GGACGGACCG ACCTGGTGAA GCAGGCAGTG TCTTTGCTGG GGCCGGATGG AATCAACACC 
ATGAGCGAAC AGGGCATGAC CCCCTTGATG TACGCCTGCG TCCGTGGGGA CGAGGCGATG 
GTGCAGATGC TGCTGGATGC CGGAGCTGAC CTGAATGTGG AGGTTGTCAG TTCTCCTCAT 
AAATATCCAT CCGTCCACCC CGAGACCCGC CATTGGACGG CTCTGACTTT TGCTGTGTTA 
CATGGACATA TTCCTGTAGT TCAGCTCCTC CTGGACGCTG GGGCCAAGGT GGAAGGCTCG 
GTGGAACATG GCGAGGAGAA CTATTCAGAA ACTCCTCTCC AACTCGCAGC GGCTGTTGGA 
AATTTTGAGC TGGTTAGCTT GCTGTTGGAG CGTGGTGCGG ATCCCCTGAT AGGAACCATG 
TACAGGAATG GAATTTCCAC AACCCCCCAG GGTGATATGA ACTCTTTCAG CCAGGCCGCA 
GCCCATGGAC ACAGGAATGT GTTCCGCAAA CTCCTCGCTC AGCCAGAGAA GGAGAAGAGT 
GATATCCTGT CCCTGGAGGA GATTCTGGCT GAGGGGACTG ACCTGGCAGA AACAGCCCCG 
CCCCCCTTGT GTGCCAGCCG CAACAGCAAG GCCAAACTGA GGGCCCTGAG GGAGGCCATG 
TATCACAGCG CTGAGCACGG CTACGTGGAT GTCACAATTG ATATCAGGAG TATAGTGATA 
GTTTAGGTGC GCCCGCCCTG GACTCTGCAC ACGTGGCTGG AGTCACTCCG GATTGCTTTC 
CAGCAGCACC GCAGGCCCCT CATCCAGTGT TTGCTCAAGG AGTTCAAGAC TATTCAAGAA 
GAGGAGTACA CAGAGGAGCT CGTCACCCAA GGCCTGCCCC TGATGTTCGA GATCTTAAAA 
GCAAGCAAGA ATGAAGTGAT CAGCCAGCAG CTGTGCGTCA TCTTCACACA CTGTTATGGT 
CCCTACCCCA TTCCCAAGCT CACAGAGATC AAGAGGAAGC AGACGTCACG CCTGGACCCT 
CATTTTCTGA ACAATAAAGA GATGTCTGAC GTGACCTTTC TGGTAGAGGG GAGGCCTTTC 
TACGCTCACA AAGTGCTGTT GTTTACAGCC TCTCCCAGGT TCAAGGCCCT CCTCTCCAGC 
AAGCCAACGA ACGACAGCAC CTGCGTAGAG ATTGGCTACG TGAAGTACCC CATTTTCCAG 
CTGGTCATGC AGTATCTCTA CTACGGTGGC CCAGAGTCAC TTCTCATTAA AAACAATGAG 
ATCATGGAGC TTCTGTCTGC CGCTAAGTTT TTCCAGCTGG AGGCTCTGCA GCGACACTGT 
GAGATTATCT GTGCAAAAAG CGTCAATACT GACAACTGTG TGGATATCTA CAGCCATGCC 
AAGTTCCTTG GGGTGACGGA GCTCTCAGCA TACTGTGAAG GCTACTTTCT TAAAAATATG 
ATGGTCCTCA TTGAAAATGA AGCATTCAAG CAGCTCCTGT ATGACAAAAA TGGCGAAGGG 
ACCGGCCAGG ATGTGCTTCA GGACTTACAG AGGACGTTGG CCATTAGGAT TCAGTCCATC 
CACCTGTCGT CTTCCAAGGG TTCTGTGGTA TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Btbd11 ( XM_008765291.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_008763513.2 Rattus norvegicus BTB domain containing 11 (Btbd11), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa62234
Clone ID Related Accession (Same CDS sequence)	XM_008765291.2
Accession Version	XM_008765291.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3039bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	ankyrin repeat and BTB/POZ domain-containing protein BTBD11 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005106.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008765291.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END##

ATGGCCAGGA GAGGTAAGAA GCCGGTGGTG CGAACGCTGG AAGATCTGAC GCTGGACTCG 
GGTTATGGTG GCGCGGCGGA CTCTGTGCGC TCCTCCAACT TGTCTCTGTG CTGTTCTGAC 
TCGCACCCGG CGTCCCCGTA TGGCGGGAGC TGCTGGCCGC CTCTAGCTGA CTCCATGCAC 
AGCCGGCACA ACAGCTTTGA TACCGTCAAC ACTGCCCTGG TGGAAGACTC CGAGGGGCTG 
GACTGCGCCG GTCAGCACTG CTCGCGGTTG CTGCCGGACC TCGACGAGGT CCCCTGGACC 
CTCCAGGAAC TGGAGTTGCT GCTGCTGCGC TCGCGGGATC CTCGGGCAGG CCCAGCAGCC 
CCCGGCAGCC TGCCCAAGGA CGCGCTGGCC AAGCTCTCGA TGCTGGTAAG CCGGGCTCTG 
GTGCGCATCG CTAAAGAGGC GCAGCGCCTG AGCCTGCGCT TCGCCAAGTG CACCAAGTAC 
GAGGTCCAGA GTGCTATGGA GATCGTCCTG TCCTGGGGCC TGGCGGCTCG TTGCACCGCT 
GCCGCGCTGG CCGCGCTGTC TCTCTATAAC ATGAGCAGTG CTGGCGGCGA CCGCTTGGGC 
CGTGGCAAGT CGGCTCGCTG CGGCCTCACC TTCTCCGTGG GCCGCGTGTA CCGCTGGATG 
GTGGACAGCC GCGTGGCGCT GCGCATCCAC GAGCATGCCG CCATCTACCT GACCGCCTGT 
ATGGCCCACC ACCACCACAC GCTTCACGAA GCGCCCAAAT TCACCGTGGA GACCCTGGAG 
CACACGGTCA ACAACGATTC AGAAATCTGG GGGCTCTTGC AGCCCTACCA GCACCTCATC 
TGTGGGAAGA ACGCCAGCGG TGTGCTGAGC CTTCCAGAGA GCTTGAACCT GCACCGAGAC 
CCACAGCGCC CCAGCAAGCC GGGAGAGCTA CCCATGTTCA GCCAGTCGGA GCTGAGGACT 
ATCGAGCAGT CCCTGCTGGC CACACGGGTG GGCAGCATCG CCGAGCTCAG TGATCTTGTG 
TCCCGGGCGA TGCACCATCT ACAGCCCCTC AATGTGAAAC ACCATGGCAA TGGTACTCCC 
CTGCACCACA AGCAGGGGGC GCTCTACTGG GAGCCGGAGG CCCTGTACAC GCTCTGCTAC 
TTCATGCACT GCCCGCAAAT GGAGTGGGAA AATCCCAACG TGGAACCTTC CAAGGTCAAC 
CTCCAGGTGG AAAGGCCCTT CCTCGTGCTG CCCCCTCTGA TGGAGTGGAT CCGAGTGGCC 
GTGGCGCACG CTGGCCACCG CCGCAGCTTT TCTATGGACA GCGACGATGT CCGCCAAGCC 
GCCAGGCTTC TGTTGCCTGG AGTGGACTGC GAGCCGCGCC AGCTCAAGGC GGACGACTGC 
TTTTGCGCTT CTCGGAAGCT GGACGCAGTG GCCATCGAAG CCAAGTTCAA GCAGGACTTG 
GGCTTCCGGA TGCTGAACTG TGGACGGACC GACCTGGTGA AGCAGGCAGT GTCTTTGCTG 
GGGCCGGATG GAATCAACAC CATGAGCGAA CAGGGCATGA CCCCCTTGAT GTACGCCTGC 
GTCCGTGGGG ACGAGGCGAT GGTGCAGATG CTGCTGGATG CCGGAGCTGA CCTGAATGTG 
GAGGTTGTCA GTTCTCCTCA TAAATATCCA TCCGTCCACC CCGAGACCCG CCATTGGACG 
GCTCTGACTT TTGCTGTGTT ACATGGACAT ATTCCTGTAG TTCAGCTCCT CCTGGACGCT 
GGGGCCAAGG TGGAAGGCTC GGTGGAACAT GGCGAGGAGA ACTATTCAGA AACTCCTCTC 
CAACTCGCAG CGGCTGTTGG AAATTTTGAG CTGGTTAGCT TGCTGTTGGA GCGTGGTGCG 
GATCCCCTGA TAGGAACCAT GTACAGGAAT GGAATTTCCA CAACCCCCCA GGGTGATATG 
AACTCTTTCA GCCAGGCCGC AGCCCATGGA CACAGGAATG TGTTCCGCAA ACTCCTCGCT 
CAGCCAGAGA AGGAGAAGAG TGATATCCTG TCCCTGGAGG AGATTCTGGC TGAGGGGACT 
GACCTGGCAG AAACAGCCCC GCCCCCCTTG TGTGCCAGCC GCAACAGCAA GGCCAAACTG 
AGGGCCCTGA GGGAGGCCAT GTATCACAGC GCTGAGCACG GCTACGTGGA TGTCACAATT 
GATATCAGGA GTATAGGTGT CCCCTGGACT CTGCACACGT GGCTGGAGTC ACTCCGGATT 
GCTTTCCAGC AGCACCGCAG GCCCCTCATC CAGTGTTTGC TCAAGGAGTT CAAGACTATT 
CAAGAAGAGG AGTACACAGA GGAGCTCGTC ACCCAAGGCC TGCCCCTGAT GTTCGAGATC 
TTAAAAGCAA GCAAGAATGA AGTGATCAGC CAGCAGCTGT GCGTCATCTT CACACACTGT 
TATGGTCCCT ACCCCATTCC CAAGCTCACA GAGATCAAGA GGAAGCAGAC GTCACGCCTG 
GACCCTCATT TTCTGAACAA TAAAGAGATG TCTGACGTGA CCTTTCTGGT AGAGGGGAGG 
CCTTTCTACG CTCACAAAGT GCTGTTGTTT ACAGCCTCTC CCAGGTTCAA GGCCCTCCTC 
TCCAGCAAGC CAACGAACGA CAGCACCTGC GTAGAGATTG GCTACGTGAA GTACCCCATT 
TTCCAGCTGG TCATGCAGTA TCTCTACTAC GGTGGCCCAG AGTCACTTCT CATTAAAAAC 
AATGAGATCA TGGAGCTTCT GTCTGCCGCT AAGTTTTTCC AGCTGGAGGC TCTGCAGCGA 
CACTGTGAGA TTATCTGTGC AAAAAGCGTC AATACTGACA ACTGTGTGGA TATCTACAGC 
CATGCCAAGT TCCTTGGGGT GACGGAGCTC TCAGCATACT GTGAAGGCTA CTTTCTTAAA 
AATATGATGG TCCTCATTGA AAATGAAGCA TTCAAGCAGC TCCTGTATGA CAAAAATGGC 
GAAGGGACCG GCCAGGATGT GCTTCAGGAC TTACAGAGGA CGTTGGCCAT TAGGATTCAG 
TCCATCCACC TGTCGTCTTC CAAGGGTTCT GTGGTATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008763513.2
CDS	534..3572
Translation	MARRGKKPVVRTLEDLTLDSGYGGAADSVRSSNLSLCCSDSHPASPYGGSCWPPLADSMHSRHNSFDTVNTALVEDSEGLDCAGQHCSRLLPDLDEVPWTLQELELLLLRSRDPRAGPAAPGSLPKDALAKLSMLVSRALVRIAKEAQRLSLRFAKCTKYEVQSAMEIVLSWGLAARCTAAALAALSLYNMSSAGGDRLGRGKSARCGLTFSVGRVYRWMVDSRVALRIHEHAAIYLTACMAHHHHTLHEAPKFTVETLEHTVNNDSEIWGLLQPYQHLICGKNASGVLSLPESLNLHRDPQRPSKPGELPMFSQSELRTIEQSLLATRVGSIAELSDLVSRAMHHLQPLNVKHHGNGTPLHHKQGALYWEPEALYTLCYFMHCPQMEWENPNVEPSKVNLQVERPFLVLPPLMEWIRVAVAHAGHRRSFSMDSDDVRQAARLLLPGVDCEPRQLKADDCFCASRKLDAVAIEAKFKQDLGFRMLNCGRTDLVKQAVSLLGPDGINTMSEQGMTPLMYACVRGDEAMVQMLLDAGADLNVEVVSSPHKYPSVHPETRHWTALTFAVLHGHIPVVQLLLDAGAKVEGSVEHGEENYSETPLQLAAAVGNFELVSLLLERGADPLIGTMYRNGISTTPQGDMNSFSQAAAHGHRNVFRKLLAQPEKEKSDILSLEEILAEGTDLAETAPPPLCASRNSKAKLRALREAMYHSAEHGYVDVTIDIRSIGVPWTLHTWLESLRIAFQQHRRPLIQCLLKEFKTIQEEEYTEELVTQGLPLMFEILKASKNEVISQQLCVIFTHCYGPYPIPKLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYAHKVLLFTASPRFKALLSSKPTNDSTCVEIGYVKYPIFQLVMQYLYYGGPESLLIKNNEIMELLSAAKFFQLEALQRHCEIICAKSVNTDNCVDIYSHAKFLGVTELSAYCEGYFLKNMMVLIENEAFKQLLYDKNGEGTGQDVLQDLQRTLAIRIQSIHLSSSKGSVV

Target ORF information:

RefSeq Version	XM_008765291.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus BTB domain containing 11 (Btbd11), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008765291.2

ORF Insert Sequence:

ATGGCCAGGA GAGGTAAGAA GCCGGTGGTG CGAACGCTGG AAGATCTGAC GCTGGACTCG 
GGTTATGGTG GCGCGGCGGA CTCTGTGCGC TCCTCCAACT TGTCTCTGTG CTGTTCTGAC 
TCGCACCCGG CGTCCCCGTA TGGCGGGAGC TGCTGGCCGC CTCTAGCTGA CTCCATGCAC 
AGCCGGCACA ACAGCTTTGA TACCGTCAAC ACTGCCCTGG TGGAAGACTC CGAGGGGCTG 
GACTGCGCCG GTCAGCACTG CTCGCGGTTG CTGCCGGACC TCGACGAGGT CCCCTGGACC 
CTCCAGGAAC TGGAGTTGCT GCTGCTGCGC TCGCGGGATC CTCGGGCAGG CCCAGCAGCC 
CCCGGCAGCC TGCCCAAGGA CGCGCTGGCC AAGCTCTCGA TGCTGGTAAG CCGGGCTCTG 
GTGCGCATCG CTAAAGAGGC GCAGCGCCTG AGCCTGCGCT TCGCCAAGTG CACCAAGTAC 
GAGGTCCAGA GTGCTATGGA GATCGTCCTG TCCTGGGGCC TGGCGGCTCG TTGCACCGCT 
GCCGCGCTGG CCGCGCTGTC TCTCTATAAC ATGAGCAGTG CTGGCGGCGA CCGCTTGGGC 
CGTGGCAAGT CGGCTCGCTG CGGCCTCACC TTCTCCGTGG GCCGCGTGTA CCGCTGGATG 
GTGGACAGCC GCGTGGCGCT GCGCATCCAC GAGCATGCCG CCATCTACCT GACCGCCTGT 
ATGGCCCACC ACCACCACAC GCTTCACGAA GCGCCCAAAT TCACCGTGGA GACCCTGGAG 
CACACGGTCA ACAACGATTC AGAAATCTGG GGGCTCTTGC AGCCCTACCA GCACCTCATC 
TGTGGGAAGA ACGCCAGCGG TGTGCTGAGC CTTCCAGAGA GCTTGAACCT GCACCGAGAC 
CCACAGCGCC CCAGCAAGCC GGGAGAGCTA CCCATGTTCA GCCAGTCGGA GCTGAGGACT 
ATCGAGCAGT CCCTGCTGGC CACACGGGTG GGCAGCATCG CCGAGCTCAG TGATCTTGTG 
TCCCGGGCGA TGCACCATCT ACAGCCCCTC AATGTGAAAC ACCATGGCAA TGGTACTCCC 
CTGCACCACA AGCAGGGGGC GCTCTACTGG GAGCCGGAGG CCCTGTACAC GCTCTGCTAC 
TTCATGCACT GCCCGCAAAT GGAGTGGGAA AATCCCAACG TGGAACCTTC CAAGGTCAAC 
CTCCAGGTGG AAAGGCCCTT CCTCGTGCTG CCCCCTCTGA TGGAGTGGAT CCGAGTGGCC 
GTGGCGCACG CTGGCCACCG CCGCAGCTTT TCTATGGACA GCGACGATGT CCGCCAAGCC 
GCCAGGCTTC TGTTGCCTGG AGTGGACTGC GAGCCGCGCC AGCTCAAGGC GGACGACTGC 
TTTTGCGCTT CTCGGAAGCT GGACGCAGTG GCCATCGAAG CCAAGTTCAA GCAGGACTTG 
GGCTTCCGGA TGCTGAACTG TGGACGGACC GACCTGGTGA AGCAGGCAGT GTCTTTGCTG 
GGGCCGGATG GAATCAACAC CATGAGCGAA CAGGGCATGA CCCCCTTGAT GTACGCCTGC 
GTCCGTGGGG ACGAGGCGAT GGTGCAGATG CTGCTGGATG CCGGAGCTGA CCTGAATGTG 
GAGGTTGTCA GTTCTCCTCA TAAATATCCA TCCGTCCACC CCGAGACCCG CCATTGGACG 
GCTCTGACTT TTGCTGTGTT ACATGGACAT ATTCCTGTAG TTCAGCTCCT CCTGGACGCT 
GGGGCCAAGG TGGAAGGCTC GGTGGAACAT GGCGAGGAGA ACTATTCAGA AACTCCTCTC 
CAACTCGCAG CGGCTGTTGG AAATTTTGAG CTGGTTAGCT TGCTGTTGGA GCGTGGTGCG 
GATCCCCTGA TAGGAACCAT GTACAGGAAT GGAATTTCCA CAACCCCCCA GGGTGATATG 
AACTCTTTCA GCCAGGCCGC AGCCCATGGA CACAGGAATG TGTTCCGCAA ACTCCTCGCT 
CAGCCAGAGA AGGAGAAGAG TGATATCCTG TCCCTGGAGG AGATTCTGGC TGAGGGGACT 
GACCTGGCAG AAACAGCCCC GCCCCCCTTG TGTGCCAGCC GCAACAGCAA GGCCAAACTG 
AGGGCCCTGA GGGAGGCCAT GTATCACAGC GCTGAGCACG GCTACGTGGA TGTCACAATT 
GATATCAGGA GTATAGGTGT CCCCTGGACT CTGCACACGT GGCTGGAGTC ACTCCGGATT 
GCTTTCCAGC AGCACCGCAG GCCCCTCATC CAGTGTTTGC TCAAGGAGTT CAAGACTATT 
CAAGAAGAGG AGTACACAGA GGAGCTCGTC ACCCAAGGCC TGCCCCTGAT GTTCGAGATC 
TTAAAAGCAA GCAAGAATGA AGTGATCAGC CAGCAGCTGT GCGTCATCTT CACACACTGT 
TATGGTCCCT ACCCCATTCC CAAGCTCACA GAGATCAAGA GGAAGCAGAC GTCACGCCTG 
GACCCTCATT TTCTGAACAA TAAAGAGATG TCTGACGTGA CCTTTCTGGT AGAGGGGAGG 
CCTTTCTACG CTCACAAAGT GCTGTTGTTT ACAGCCTCTC CCAGGTTCAA GGCCCTCCTC 
TCCAGCAAGC CAACGAACGA CAGCACCTGC GTAGAGATTG GCTACGTGAA GTACCCCATT 
TTCCAGCTGG TCATGCAGTA TCTCTACTAC GGTGGCCCAG AGTCACTTCT CATTAAAAAC 
AATGAGATCA TGGAGCTTCT GTCTGCCGCT AAGTTTTTCC AGCTGGAGGC TCTGCAGCGA 
CACTGTGAGA TTATCTGTGC AAAAAGCGTC AATACTGACA ACTGTGTGGA TATCTACAGC 
CATGCCAAGT TCCTTGGGGT GACGGAGCTC TCAGCATACT GTGAAGGCTA CTTTCTTAAA 
AATATGATGG TCCTCATTGA AAATGAAGCA TTCAAGCAGC TCCTGTATGA CAAAAATGGC 
GAAGGGACCG GCCAGGATGT GCTTCAGGAC TTACAGAGGA CGTTGGCCAT TAGGATTCAG 
TCCATCCACC TGTCGTCTTC CAAGGGTTCT GTGGTATGA