Sdr42e1 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Sdr42e1
Entrez Gene ID	307897
Full Name	short chain dehydrogenase/reductase family 42E, member 1
Synonyms	Hspc105,RGD1308481
General protein information	Preferred Names short chain dehydrogenase/reductase family 42E, member 1 Names short-chain dehydrogenase/reductase family 42E member 1
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 19 Map Location: 19q12

mRNA and Protein(s)

mRNA	Protein	Name
NM_001271269.1	NP_001258198.1	short-chain dehydrogenase/reductase family 42E member 1

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	SDR42E1	XP_001148161.1
Canis lupus familiaris (dog)	SDR42E1	XP_546811.2
Rattus norvegicus (Norway rat)	Sdr42e1	NP_001258198.1
Homo sapiens (human)	SDR42E1	NP_660151.2
Gallus gallus (chicken)	SDR42E1	XP_004944317.1
Oryza sativa (rice)	Os02g0715200	NP_001047924.1
Xenopus tropicalis (tropical clawed frog)	sdr42e1	XP_004913668.1
	SDR42E1	XP_001111753.1
Bos taurus (cattle)	SDR42E1	NP_001073761.1
Mus musculus (house mouse)	Sdr42e1	NP_083001.1
Arabidopsis thaliana (thale cress)	AT2G33630	NP_180921.1
Danio rerio (zebrafish)	sdr42e1	NP_001032779.1

Gene Ontology
Bibliography

Related articles in PubMed

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
Gaudet P, Livstone MS, Lewis SE, Thomas PD
Briefings in bioinformatics12(5)449-62(2011 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Sdr42e1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Sdr42e1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa10810	NM_001271269.1 Latest version!	Rattus norvegicus short chain dehydrogenase/reductase family 42E, member 1 (Sdr42e1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$223.30 $319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Sdr42e1 ( NM_001271269.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001258198.1 Rattus norvegicus short chain dehydrogenase/reductase family 42E, member 1 (Sdr42e1), mRNA.

Price & Availability↑

CloneID	ORa10810
Clone ID Related Accession (Same CDS sequence)	NM_001271269.1
Accession Version	NM_001271269.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1182bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-30
Organism	Rattus norvegicus(Norway rat)
Product	short-chain dehydrogenase/reductase family 42E member 1
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from FQ103187.1, FN798906.1, BI295943.1, AABR07043966.1 and BQ196592.1. On or before Sep 13, 2012 this sequence version replaced XM_001078486.3, XM_226509.6. Sequence Note: This RefSeq record was created from transcript and genomic sequence data from different strains because no single transcript from the same strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data. ##Evidence-Data-START## Transcript exon combination :: FQ103187.1, FQ240325.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01906355 [ECO:0000348] ##Evidence-Data-END##

ATGGACTCCC CAAGGTTCCC GGAGGAAACC GTCCTCATTA CCGGAGGAGG AGGATATTTT 
GGCTTCCGCC TCGGCTGCGC TCTGAACCAG AAAGGAGTCC GTGTGATTCT GTTCGACATC 
ATCGAACCGG CCCAGAACCT TCCAGAGGGA ATCACATTCG TCCGCGGGGA TATCCGCTGC 
CTCTCTGACG TGGAGGCGGC CTTCCAGGAT GCTGACATCG CATGCGTCTT CCACATCGCC 
TCTTACGGCA TGTCTGGGAG GGAGCAACTG AACAAAACCC GGATTGAAGA GGTCAACGTG 
GGTGGCACAG AGAACATCCT CCAGGCCTGC CTAGGGAGAG GAGTGCCCAG CTTGGTCTAC 
ACGAGCACAT TTAACGTCAT CTTCGGAGGT CAAGTCATCA GAAACGGGGA CGAGTCTCTG 
CCTTACCTAC CTCTTCACCT GCACCCAGAT CACTACTCCA GGACCAAATC CATTGCAGAG 
AAGAAGGTCC TGGAAGCCAA TGGCTTGGCC TTCAAGCAAG GGGATGGCGT ACTCAGAACC 
TGTGCGATAA GGCCAGCTGG CATCTACGGG GCTGGAGAGC AGAGGCACCT TCCCAGGGTG 
GTTAGCTACA TTGAGAGGGG CCTGTTCAGA TTCGTGTATG GGGATCCCCA AAGCCTGGTC 
GAGTTTGTCC ACGTGGATAA CCTGGCGAAG GCTCACATTC TGGCCTCCGA GGCTCTGAAA 
GCTGATAAGG GCCACATTGC CTCCGGGCAG CCCTACTTCA TCTCGGACGG TAGGCCCGTA 
AATAACTTTG AGTTCTTTAG GCCACTGGTT GAGGGTCTGG GCTACACATT CCCAACCACC 
CGCCTGCCAC TAACCCTCAT CTACTACTTC GCTTTCCTGA TAGAGATGAC CCACCTCATT 
GTGGGCAGGC TCTACAACTT CCAGCCCTTC CTCACCTGCA CCGAGGTTTA TAAAACTGGT 
GTCACACATT ACTTCAGCCT AGAGAAAGCC AAGAGTGAGC TAGGCTATGC ACCTCAGCCG 
TTTGACCTGC AGGAGGTGGT CGAGTGGTTT AAAGCCCATG GTCATGGCCG AAGGCCTCGA 
GGTCAAGACT CAGAGTTTAT TCTGTGGGAT GGAATTCTGG TCCTACTCTT GGCGTTTTCT 
GTTCTGACCT GGATCCCTCC TTCCACAATC CTGTCCCTAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001258198.1
CDS	106..1287
Translation	MDSPRFPEETVLITGGGGYFGFRLGCALNQKGVRVILFDIIEPAQNLPEGITFVRGDIRCLSDVEAAFQDADIACVFHIASYGMSGREQLNKTRIEEVNVGGTENILQACLGRGVPSLVYTSTFNVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEKKVLEANGLAFKQGDGVLRTCAIRPAGIYGAGEQRHLPRVVSYIERGLFRFVYGDPQSLVEFVHVDNLAKAHILASEALKADKGHIASGQPYFISDGRPVNNFEFFRPLVEGLGYTFPTTRLPLTLIYYFAFLIEMTHLIVGRLYNFQPFLTCTEVYKTGVTHYFSLEKAKSELGYAPQPFDLQEVVEWFKAHGHGRRPRGQDSEFILWDGILVLLLAFSVLTWIPPSTILSL

Target ORF information:

RefSeq Version	NM_001271269.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus short chain dehydrogenase/reductase family 42E, member 1 (Sdr42e1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001271269.1

ORF Insert Sequence:

ATGGACTCCC CAAGGTTCCC GGAGGAAACC GTCCTCATTA CCGGAGGAGG AGGATATTTT 
GGCTTCCGCC TCGGCTGCGC TCTGAACCAG AAAGGAGTCC GTGTGATTCT GTTCGACATC 
ATCGAACCGG CCCAGAACCT TCCAGAGGGA ATCACATTCG TCCGCGGGGA TATCCGCTGC 
CTCTCTGACG TGGAGGCGGC CTTCCAGGAT GCTGACATCG CATGCGTCTT CCACATCGCC 
TCTTACGGCA TGTCTGGGAG GGAGCAACTG AACAAAACCC GGATTGAAGA GGTCAACGTG 
GGTGGCACAG AGAACATCCT CCAGGCCTGC CTAGGGAGAG GAGTGCCCAG CTTGGTCTAC 
ACGAGCACAT TTAACGTCAT CTTCGGAGGT CAAGTCATCA GAAACGGGGA CGAGTCTCTG 
CCTTACCTAC CTCTTCACCT GCACCCAGAT CACTACTCCA GGACCAAATC CATTGCAGAG 
AAGAAGGTCC TGGAAGCCAA TGGCTTGGCC TTCAAGCAAG GGGATGGCGT ACTCAGAACC 
TGTGCGATAA GGCCAGCTGG CATCTACGGG GCTGGAGAGC AGAGGCACCT TCCCAGGGTG 
GTTAGCTACA TTGAGAGGGG CCTGTTCAGA TTCGTGTATG GGGATCCCCA AAGCCTGGTC 
GAGTTTGTCC ACGTGGATAA CCTGGCGAAG GCTCACATTC TGGCCTCCGA GGCTCTGAAA 
GCTGATAAGG GCCACATTGC CTCCGGGCAG CCCTACTTCA TCTCGGACGG TAGGCCCGTA 
AATAACTTTG AGTTCTTTAG GCCACTGGTT GAGGGTCTGG GCTACACATT CCCAACCACC 
CGCCTGCCAC TAACCCTCAT CTACTACTTC GCTTTCCTGA TAGAGATGAC CCACCTCATT 
GTGGGCAGGC TCTACAACTT CCAGCCCTTC CTCACCTGCA CCGAGGTTTA TAAAACTGGT 
GTCACACATT ACTTCAGCCT AGAGAAAGCC AAGAGTGAGC TAGGCTATGC ACCTCAGCCG 
TTTGACCTGC AGGAGGTGGT CGAGTGGTTT AAAGCCCATG GTCATGGCCG AAGGCCTCGA 
GGTCAAGACT CAGAGTTTAT TCTGTGGGAT GGAATTCTGG TCCTACTCTT GGCGTTTTCT 
GTTCTGACCT GGATCCCTCC TTCCACAATC CTGTCCCTAT GA