LOC108827567 cDNA ORF clone, Raphanus sativus(radish)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC108827567
Entrez Gene ID	108827567
Full Name	pentatricopeptide repeat-containing protein At1g79080, chloroplastic
Gene Type	protein-coding
Organism	Raphanus sativus(radish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_018600991.1	XP_018456493.1	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g79080, chloroplastic

Pathways from BioSystems
Gene Ontology

The following LOC108827567 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC108827567 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORc43566	XM_018600991.1 Latest version!	Raphanus sativus pentatricopeptide repeat-containing protein At1g79080, chloroplastic (LOC108827567), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC108827567 ( XM_018600991.1 ) cDNA ORF clone, Raphanus sativus(radish) -> XP_018456493.1 Raphanus sativus pentatricopeptide repeat-containing protein At1g79080, chloroplastic (LOC108827567), mRNA.

Price & Availability↑

CloneID	ORc43566
Clone ID Related Accession (Same CDS sequence)	XM_018600991.1
Accession Version	XM_018600991.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1653bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-10-03
Organism	Raphanus sativus(radish)
Product	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g79080, chloroplastic
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017353147.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Raphanus sativus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END##

ATGTCGACTC TACTGAACCC AATCTTATCC ATGGCGGCGA ACCCATCTCC GGTAGGGTTC 
CTCTCCCGCC TCTCCACCGG TTTCCCCCAA TCCTCCTCCT CCTCCGTCAA CAAAAACGTC 
GCTAGGGTTC TGACTCTATC CCCCAAAGAC TCCGCCTTTA CCATCACCGG ATCCAATTGG 
AAACCCGACG ACCCGACCCT GAGCAACCAC TTCTCCCACC TCCAAACCCT AGTCACAAAA 
GGCCACAAAC CAAACCCATC CCACTCCACC CAGCTCCTCT ACGACCTCTG CAAAGCCAAC 
AGACTCAAGA AAGCGATCCG CGTGATCGAG CTCATGGTCT CCTCCGGCGT CATCCCCGAC 
GCCTCCGCCT ACACCTACCT CGTCAACCAG CTCTGCAAGC GAGGCAACGT CGGCTACGCG 
ATGCAGCTCG TCGAGAAGAT GGAGGAAGAC CACGGCTTCC CTCCCAACAC CGTCACCTAC 
AACGCCCTAG TCCGCGGCCT CTGCATGCTC GGTAGCCTCT CCCAGAGCCT CCGCTTCGTC 
GAGAGGCTGA TGGAGAGAGG CTTAGCTCCC AACGCCTTCA CCTATTCCTT CCTCCTCGAG 
GCTGCTTACA GAGAGCGAGG AACCGACGAG GCCGTGAAGC TCCTGGAGGA GATTGTCGCC 
AAGGGAGGCG AGCCGAATCT GGTTTGTTAC AATGTGTTGT TGACTGGTTT TTGTAAAGAA 
GGGAGGACTG ATGACGCGTT GAGGATGTTC AGAGAGTTAC CTCTGAAGGG TTTTAAGCCT 
AACGTTGTGA GTTATAACAT TTGTTTGAGG TGTTTGTGCT GTGACGGGAG GTGGGAGGAG 
GCTAACGAGT TGTTAGCTGA GATGGACGGT GGAGATAGAT CTCCTTCGGT TGTTACATAC 
AACATTTTGA TTAATTCGTT AGCTTTCCAC GGGAGAACGG ACCAGGCGAT GGAGGTTTTG 
AGAGAGATGG GGAGAGGAGT CACTGCCACT AGCTACAACC CTGTGATAGC CCGTCTTTGC 
AAGGAAGGGA AGGTTGATCT CGTTGTGAAG TGTCTGGACG ACATGATTTA CAGACGGTGT 
AGGCCTAACG AGGGGACGTA CAACGCGATA GGAGCGTTGT GCGAGGGCAA GGTGCGAGAA 
GCGTTTTACA TCATACAGAG CTTGAGCAAG AAGCATAGAT GCTGCACGCA CGATTTCTAC 
AAGAGCGTGA TCACTAGCCT GTGCAGGAAA GGGAACACGT TTGCTGCGTT CCAGCTCTTG 
TATGAGATGA CTTGCAGCGG GTTCGAACCC GATTCTCATA CCTACTCGGC TCTGATCAGA 
GGGTTGTGTA ACGAAGGGAT GTTTGACGGA GCTAAGGAGG TTTTGTCGAT AATGGAGGAG 
AGTGGGTGCT GTAAACCTAC GGTGGATAAC TTCAACGCGA TGATTCTTGG GTATTGCAAG 
GTAAGGAGGA CGGATTTGGC GTTGGAGGTG TTTGAGACGA TGGTTGAGAG GAGGAGAATG 
CCGAACGAGA CGACATATGT GATAATCGTT GAAGGGATTG CTCATGAGAA TGAGCTGGAG 
CTGGCTAGAG AGGTTCTTGA GGAGCTGAGA TCTCGCAAGG TTGTGGGACA AAACGCTGTA 
GATAGGATTG TGATGCAGTT TAATTTAGAT TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_018456493.1
CDS	156..1808
Translation	MSTLLNPILSMAANPSPVGFLSRLSTGFPQSSSSSVNKNVARVLTLSPKDSAFTITGSNWKPDDPTLSNHFSHLQTLVTKGHKPNPSHSTQLLYDLCKANRLKKAIRVIELMVSSGVIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEEDHGFPPNTVTYNALVRGLCMLGSLSQSLRFVERLMERGLAPNAFTYSFLLEAAYRERGTDEAVKLLEEIVAKGGEPNLVCYNVLLTGFCKEGRTDDALRMFRELPLKGFKPNVVSYNICLRCLCCDGRWEEANELLAEMDGGDRSPSVVTYNILINSLAFHGRTDQAMEVLREMGRGVTATSYNPVIARLCKEGKVDLVVKCLDDMIYRRCRPNEGTYNAIGALCEGKVREAFYIIQSLSKKHRCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTCSGFEPDSHTYSALIRGLCNEGMFDGAKEVLSIMEESGCCKPTVDNFNAMILGYCKVRRTDLALEVFETMVERRRMPNETTYVIIVEGIAHENELELAREVLEELRSRKVVGQNAVDRIVMQFNLD

Target ORF information:

RefSeq Version	XM_018600991.1
Organism	Raphanus sativus(radish)
Definition	Raphanus sativus pentatricopeptide repeat-containing protein At1g79080, chloroplastic (LOC108827567), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_018600991.1

ORF Insert Sequence:

ATGTCGACTC TACTGAACCC AATCTTATCC ATGGCGGCGA ACCCATCTCC GGTAGGGTTC 
CTCTCCCGCC TCTCCACCGG TTTCCCCCAA TCCTCCTCCT CCTCCGTCAA CAAAAACGTC 
GCTAGGGTTC TGACTCTATC CCCCAAAGAC TCCGCCTTTA CCATCACCGG ATCCAATTGG 
AAACCCGACG ACCCGACCCT GAGCAACCAC TTCTCCCACC TCCAAACCCT AGTCACAAAA 
GGCCACAAAC CAAACCCATC CCACTCCACC CAGCTCCTCT ACGACCTCTG CAAAGCCAAC 
AGACTCAAGA AAGCGATCCG CGTGATCGAG CTCATGGTCT CCTCCGGCGT CATCCCCGAC 
GCCTCCGCCT ACACCTACCT CGTCAACCAG CTCTGCAAGC GAGGCAACGT CGGCTACGCG 
ATGCAGCTCG TCGAGAAGAT GGAGGAAGAC CACGGCTTCC CTCCCAACAC CGTCACCTAC 
AACGCCCTAG TCCGCGGCCT CTGCATGCTC GGTAGCCTCT CCCAGAGCCT CCGCTTCGTC 
GAGAGGCTGA TGGAGAGAGG CTTAGCTCCC AACGCCTTCA CCTATTCCTT CCTCCTCGAG 
GCTGCTTACA GAGAGCGAGG AACCGACGAG GCCGTGAAGC TCCTGGAGGA GATTGTCGCC 
AAGGGAGGCG AGCCGAATCT GGTTTGTTAC AATGTGTTGT TGACTGGTTT TTGTAAAGAA 
GGGAGGACTG ATGACGCGTT GAGGATGTTC AGAGAGTTAC CTCTGAAGGG TTTTAAGCCT 
AACGTTGTGA GTTATAACAT TTGTTTGAGG TGTTTGTGCT GTGACGGGAG GTGGGAGGAG 
GCTAACGAGT TGTTAGCTGA GATGGACGGT GGAGATAGAT CTCCTTCGGT TGTTACATAC 
AACATTTTGA TTAATTCGTT AGCTTTCCAC GGGAGAACGG ACCAGGCGAT GGAGGTTTTG 
AGAGAGATGG GGAGAGGAGT CACTGCCACT AGCTACAACC CTGTGATAGC CCGTCTTTGC 
AAGGAAGGGA AGGTTGATCT CGTTGTGAAG TGTCTGGACG ACATGATTTA CAGACGGTGT 
AGGCCTAACG AGGGGACGTA CAACGCGATA GGAGCGTTGT GCGAGGGCAA GGTGCGAGAA 
GCGTTTTACA TCATACAGAG CTTGAGCAAG AAGCATAGAT GCTGCACGCA CGATTTCTAC 
AAGAGCGTGA TCACTAGCCT GTGCAGGAAA GGGAACACGT TTGCTGCGTT CCAGCTCTTG 
TATGAGATGA CTTGCAGCGG GTTCGAACCC GATTCTCATA CCTACTCGGC TCTGATCAGA 
GGGTTGTGTA ACGAAGGGAT GTTTGACGGA GCTAAGGAGG TTTTGTCGAT AATGGAGGAG 
AGTGGGTGCT GTAAACCTAC GGTGGATAAC TTCAACGCGA TGATTCTTGG GTATTGCAAG 
GTAAGGAGGA CGGATTTGGC GTTGGAGGTG TTTGAGACGA TGGTTGAGAG GAGGAGAATG 
CCGAACGAGA CGACATATGT GATAATCGTT GAAGGGATTG CTCATGAGAA TGAGCTGGAG 
CTGGCTAGAG AGGTTCTTGA GGAGCTGAGA TCTCGCAAGG TTGTGGGACA AAACGCTGTA 
GATAGGATTG TGATGCAGTT TAATTTAGAT TGA