ORF » Species Summary » Populus trichocarpa » LOC7489888 cDNA ORF clone

LOC7489888 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7489888 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7489888 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa06412 XM_002301576.2
Latest version!		 Populus trichocarpa early-responsive to dehydration family protein (POPTR_0002s21480g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 12-14 $426.30
$609.00
OPa424016 XM_024594633.1
Latest version!		 Populus trichocarpa CSC1-like protein At3g21620 (LOC7489888), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00
OPa424016 XM_024594632.1
Latest version!		 Populus trichocarpa CSC1-like protein At3g21620 (LOC7489888), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7489888 ( XM_002301576.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002301612.2 Populus trichocarpa early-responsive to dehydration family protein (POPTR_0002s21480g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa06412
    Clone ID Related Accession (Same CDS sequence) XM_002301576.2
    Accession Version XM_002301576.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2292bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product early-responsive to dehydration family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008468). On Dec 16, 2013 this sequence version replaced XM_002301576.1. COMPLETENESS: incomplete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    ATGGCGACAC TGAGTGATAT AGGAGTAGCA GCAGCTATTA ACATTCTCAC TGCGTTTGCT 
    TTCTTCTTCG CATTTGCAAT TCTCCGGATT CAACCAGTCA ATGATAGGGT CTACTTTCCC 
    AAATGGTATA TCAAGGGGTT AAGGAGCAGT CCTTTCGGCA CTGGTGCCTT TGTTGGCAAG 
    GTTGTCAATT TGGACTTCAG GTCATATGTG AGGTTTCTCA ACTGGATGCC TGCGGCATTA 
    CATATGCCGG AACCTGAGCT CATTGACCAT GCTGGATTGG ACTCTGCTGT TTACTTGAGG 
    ATTTACCTGA TAGGGCTTAA GATTTTTGTT CCTATTGCAT TCCTGGCCTT CACTATCCTG 
    GTGCCAGTGA ACTGGACAAA TAGCACTTTG GAGCGTTCTA ATTTGACTTA CAGTGATTTA 
    GATAAGCTCT CTATTTCAAA TATACCCACA GGATCAAACA GATTCTGGAC CCATTTGGTG 
    ATGGCCTATG CCTCTACCTT TTGGACATGC TATGTGCTAA AAAAAGAGTA TGAGATAGTG 
    GCTAAAATGA GGTTGCATTT TCTTGCATCA GAAAAACGAC GTCCTGATCA ATTTACAGTA 
    CTGGTTAGAA ATGTGCCACC AGATGCTGAT GAATCGGTTA GTGAACTCGT GGAGCACTTT 
    TTCCTAGTCA ACCATCCTAA TGATTATCTC ACTTACCAGG TTGTCTACAA TGCTAATCAA 
    CTTTCTCACC TAGTCAACGA GAAGAAAAAG ATGAAGAACT GGCTTGACTA TTATCAAATC 
    AAATATTCAA GAAACAAATC CAGAATGCCC TCCCTCAAGA CTGGTTTTCT TGGCCTTTTC 
    GGGACTAGGG TGGATGCAAT TGATCATTAT ACATCTGAGA TTGAGAGACT GTCTAGAAAA 
    AGAGATGAGA CTGTGAACAA TGCCAAGGCA ATCATGCCAG CAGCATTTGT TTCCTTCAAA 
    ACTCGATGGG GAGCTGCTGT TTGTGCACAA ACACAACAAT CCAGAAATCC AGCTATGTGG 
    TTGACTGAGT GGGCTCCTGA ACCCCGTGAT GTATACTGGG ACAACCTCGC AATTCCATTT 
    GTTTCACTGG CACTAAGAAG GCTCGTTATC GCTGTCACAT TTTTCTTCCT TACTTTCTTC 
    TTTATGGTTC CCATTGCATT TGTACAGTCC CTTGCAAACA TTGAAGGAAT TGAGAAAGCA 
    CTCCCGTTCC TGAAACCTAT AATTGAAATG AAAGTGATAA AGTCATTCAT TCAAGGTTTC 
    CTTCCTGGAA TTGCTTTGAA GATATTTCTT ATTTTTCTAC CCTCCATATT GATGCTAATG 
    TCTAAATTTG AGGGATTCAT TAGCATATCA GGCCTAGAGA GGAGATCTGC GGCTAGATAT 
    TATATCTTCC AGTTCATTAA TGTATTTCTC GGAAGCATAA TCACCGGAAC TGCATTTCAA 
    CAACTGGATA ATTTTATCCA CCAGTCTGCA ACTGAAATAC CAAAGACAAT CGGAGTATCC 
    ATACCTATGA AAGCAACTTT CTTCATAACT TACATCATGG TTGATGGGTG GGCTGGAGTT 
    GCTGGGGAGA TTTTAAGATT GAAACCCTTG ATAATCTATC ACCTGAAAAT GTTTTTCATG 
    GTGAAGACCG AAAAGGACAT GGAAGAGGCG ATGGATCCAG GAACTCTTGG TTTCAACACA 
    GGGGAACCAC AAATACAACT TTATTTCTTA CTTGGCCTCG TTTATGCTGT GGTGTCGCCC 
    ATCTTACTTC CTTTCATTAT AGTATTCTTT GCCCTCGCAT TTGTTGTGTA TCGTCATCAG 
    ATTATAAATG TTTACAATCA GGAGTATGAG AGTGCTGCAG CATTCTGGCC TGATGTCCAT 
    GGACGCATCA TAGTAGCAGT AATTGTCTCA CAGCTGCTGC TAATGGGATT GTTAAGCACA 
    AAAGAAGCGG CTCAGTCAAC ACCGTTGCTC ATTACACTCC CAGTATTGAC AATATGGTTC 
    CATTTGTTCT GCAAAGGCCG TTATGAACCT GCTTTTGTTA GATATCCATT GCAGGAAGCA 
    ATGATGAAAG ATACATTGGA ACGCGCCAAA GAGCCCAACC TGAACTTGAA AAGCTTCCTT 
    CAAAACGCTT ACATCCACCC AGTTTTTAAA GGCGAAGACG ATAGTGACAG CGATGAAGCG 
    CCTGAAGAGT TTGAGAAAGA ACCTGATCTG GTCCCAACAA AGCGCCAGTC TCGAAGGAAT 
    ACACCATTGC CAAGTAAGCA TGGCTCGGCT GCATCCTCCC AGCCTGAAGC TCAGGATTAT 
    CCACTACTTT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002301612.2
    CDS238..2529
    Translation

    Target ORF information:

    RefSeq Version XM_002301576.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa early-responsive to dehydration family protein (POPTR_0002s21480g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002301576.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    ATGGCGACAC TGAGTGATAT AGGAGTAGCA GCAGCTATTA ACATTCTCAC TGCGTTTGCT 
    TTCTTCTTCG CATTTGCAAT TCTCCGGATT CAACCAGTCA ATGATAGGGT CTACTTTCCC 
    AAATGGTATA TCAAGGGGTT AAGGAGCAGT CCTTTCGGCA CTGGTGCCTT TGTTGGCAAG 
    GTTGTCAATT TGGACTTCAG GTCATATGTG AGGTTTCTCA ACTGGATGCC TGCGGCATTA 
    CATATGCCGG AACCTGAGCT CATTGACCAT GCTGGATTGG ACTCTGCTGT TTACTTGAGG 
    ATTTACCTGA TAGGGCTTAA GATTTTTGTT CCTATTGCAT TCCTGGCCTT CACTATCCTG 
    GTGCCAGTGA ACTGGACAAA TAGCACTTTG GAGCGTTCTA ATTTGACTTA CAGTGATTTA 
    GATAAGCTCT CTATTTCAAA TATACCCACA GGATCAAACA GATTCTGGAC CCATTTGGTG 
    ATGGCCTATG CCTCTACCTT TTGGACATGC TATGTGCTAA AAAAAGAGTA TGAGATAGTG 
    GCTAAAATGA GGTTGCATTT TCTTGCATCA GAAAAACGAC GTCCTGATCA ATTTACAGTA 
    CTGGTTAGAA ATGTGCCACC AGATGCTGAT GAATCGGTTA GTGAACTCGT GGAGCACTTT 
    TTCCTAGTCA ACCATCCTAA TGATTATCTC ACTTACCAGG TTGTCTACAA TGCTAATCAA 
    CTTTCTCACC TAGTCAACGA GAAGAAAAAG ATGAAGAACT GGCTTGACTA TTATCAAATC 
    AAATATTCAA GAAACAAATC CAGAATGCCC TCCCTCAAGA CTGGTTTTCT TGGCCTTTTC 
    GGGACTAGGG TGGATGCAAT TGATCATTAT ACATCTGAGA TTGAGAGACT GTCTAGAAAA 
    AGAGATGAGA CTGTGAACAA TGCCAAGGCA ATCATGCCAG CAGCATTTGT TTCCTTCAAA 
    ACTCGATGGG GAGCTGCTGT TTGTGCACAA ACACAACAAT CCAGAAATCC AGCTATGTGG 
    TTGACTGAGT GGGCTCCTGA ACCCCGTGAT GTATACTGGG ACAACCTCGC AATTCCATTT 
    GTTTCACTGG CACTAAGAAG GCTCGTTATC GCTGTCACAT TTTTCTTCCT TACTTTCTTC 
    TTTATGGTTC CCATTGCATT TGTACAGTCC CTTGCAAACA TTGAAGGAAT TGAGAAAGCA 
    CTCCCGTTCC TGAAACCTAT AATTGAAATG AAAGTGATAA AGTCATTCAT TCAAGGTTTC 
    CTTCCTGGAA TTGCTTTGAA GATATTTCTT ATTTTTCTAC CCTCCATATT GATGCTAATG 
    TCTAAATTTG AGGGATTCAT TAGCATATCA GGCCTAGAGA GGAGATCTGC GGCTAGATAT 
    TATATCTTCC AGTTCATTAA TGTATTTCTC GGAAGCATAA TCACCGGAAC TGCATTTCAA 
    CAACTGGATA ATTTTATCCA CCAGTCTGCA ACTGAAATAC CAAAGACAAT CGGAGTATCC 
    ATACCTATGA AAGCAACTTT CTTCATAACT TACATCATGG TTGATGGGTG GGCTGGAGTT 
    GCTGGGGAGA TTTTAAGATT GAAACCCTTG ATAATCTATC ACCTGAAAAT GTTTTTCATG 
    GTGAAGACCG AAAAGGACAT GGAAGAGGCG ATGGATCCAG GAACTCTTGG TTTCAACACA 
    GGGGAACCAC AAATACAACT TTATTTCTTA CTTGGCCTCG TTTATGCTGT GGTGTCGCCC 
    ATCTTACTTC CTTTCATTAT AGTATTCTTT GCCCTCGCAT TTGTTGTGTA TCGTCATCAG 
    ATTATAAATG TTTACAATCA GGAGTATGAG AGTGCTGCAG CATTCTGGCC TGATGTCCAT 
    GGACGCATCA TAGTAGCAGT AATTGTCTCA CAGCTGCTGC TAATGGGATT GTTAAGCACA 
    AAAGAAGCGG CTCAGTCAAC ACCGTTGCTC ATTACACTCC CAGTATTGAC AATATGGTTC 
    CATTTGTTCT GCAAAGGCCG TTATGAACCT GCTTTTGTTA GATATCCATT GCAGGAAGCA 
    ATGATGAAAG ATACATTGGA ACGCGCCAAA GAGCCCAACC TGAACTTGAA AAGCTTCCTT 
    CAAAACGCTT ACATCCACCC AGTTTTTAAA GGCGAAGACG ATAGTGACAG CGATGAAGCG 
    CCTGAAGAGT TTGAGAAAGA ACCTGATCTG GTCCCAACAA AGCGCCAGTC TCGAAGGAAT 
    ACACCATTGC CAAGTAAGCA TGGCTCGGCT GCATCCTCCC AGCCTGAAGC TCAGGATTAT 
    CCACTACTTT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7489888 ( XM_024594632.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024450400.1 Populus trichocarpa CSC1-like protein At3g21620 (LOC7489888), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa424016
    Clone ID Related Accession (Same CDS sequence) XM_024594632.1 , XM_024594633.1
    Accession Version XM_024594632.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2304bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product CSC1-like protein At3g21620
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    ATGGCGACAC TGAGTGATAT AGGAGTAGCA GCAGCTATTA ACATTCTCAC TGCGTTTGCT 
    TTCTTCTTCG CATTTGCAAT TCTCCGGATT CAACCAGTCA ATGATAGGGT CTACTTTCCC 
    AAATGGTATA TCAAGGGGTT AAGGAGCAGT CCTTTCGGCA CTGGTGCCTT TGTTGGCAAG 
    GTTGTCAATT TGGACTTCAG GTCATATGTG AGGTTTCTCA ACTGGATGCC TGCGGCATTA 
    CATATGCCGG AACCTGAGCT CATTGACCAT GCTGGATTGG ACTCTGCTGT TTACTTGAGG 
    ATTTACCTGA TAGGGCTTAA GATTTTTGTT CCTATTGCAT TCCTGGCCTT CACTATCCTG 
    GTGCCAGTGA ACTGGACAAA TAGCACTTTG GAGCGTTCTA ATTTGACTTA CAGTGATTTA 
    GATAAGCTCT CTATTTCAAA TATACCCACA GGATCAAACA GATTCTGGAC CCATTTGGTG 
    ATGGCCTATG CCTCTACCTT TTGGACATGC TATGTGCTAA AAAAAGAGTA TGAGATAGTG 
    GCTAAAATGA GGTTGCATTT TCTTGCATCA GAAAAACGAC GTCCTGATCA ATTTACAGTA 
    CTGGTTAGAA ATGTGCCACC AGATGCTGAT GAATCGGTTA GTGAACTCGT GGAGCACTTT 
    TTCCTAGTCA ACCATCCTAA TGATTATCTC ACTTACCAGG TTGTCTACAA TGCTAATCAA 
    CTTTCTCACC TAGTCAACGA GAAGAAAAAG ATGAAGAACT GGCTTGACTA TTATCAAATC 
    AAATATTCAA GAAACAAATC CAGAATGCCC TCCCTCAAGA CTGGTTTTCT TGGCCTTTTC 
    GGGACTAGGG TGGATGCAAT TGATCATTAT ACATCTGAGA TTGAGAGACT GTCTAGAAAA 
    ATCTCCTTGG AGAGAGATGA GACTGTGAAC AATGCCAAGG CAATCATGCC AGCAGCATTT 
    GTTTCCTTCA AAACTCGATG GGGAGCTGCT GTTTGTGCAC AAACACAACA ATCCAGAAAT 
    CCAGCTATGT GGTTGACTGA GTGGGCTCCT GAACCCCGTG ATGTATACTG GGACAACCTC 
    GCAATTCCAT TTGTTTCACT GGCACTAAGA AGGCTCGTTA TCGCTGTCAC ATTTTTCTTC 
    CTTACTTTCT TCTTTATGGT TCCCATTGCA TTTGTACAGT CCCTTGCAAA CATTGAAGGA 
    ATTGAGAAAG CACTCCCGTT CCTGAAACCT ATAATTGAAA TGAAAGTGAT AAAGTCATTC 
    ATTCAAGGTT TCCTTCCTGG AATTGCTTTG AAGATATTTC TTATTTTTCT ACCCTCCATA 
    TTGATGCTAA TGTCTAAATT TGAGGGATTC ATTAGCATAT CAGGCCTAGA AAGGAGATCT 
    GCGGCTAGAT ATTATATCTT CCAGTTCATT AATGTATTTC TCGGAAGCAT AATCACCGGA 
    ACTGCATTTC AACAACTGGA TAATTTTATC CACCAGTCTG CAACTGAAAT ACCAAAGACA 
    ATCGGAGTAT CCATACCTAT GAAAGCAACT TTCTTCATAA CTTACATCAT GGTTGATGGG 
    TGGGCTGGAG TTGCTGGGGA GATTTTAAGA TTGAAACCCT TGATAATCTA TCACCTGAAA 
    ATGTTTTTCA TGGTGAAGAC CGAAAAGGAC ATGGAAGAGG CGATGGATCC AGGAACTCTT 
    GGTTTCAACA CAGGGGAACC ACAAATACAA CTTTATTTCT TACTTGGCCT CGTTTATGCT 
    GTGGTGTCGC CCATCTTACT TCCTTTCATT ATAGTATTCT TTGCCCTCGC ATTTGTTGTG 
    TATCGTCATC AGATTATAAA TGTTTACAAT CAGGAGTATG AGAGTGCTGC AGCATTCTGG 
    CCTGATGTCC ATGGACGCAT CATAGTAGCA GTAATTGTCT CACAGCTGCT GCTAATGGGA 
    TTGTTAAGCA CAAAAGAAGC GGCTCAGTCA ACACCGTTGC TCATTACACT CCCAGTATTG 
    ACAATATGGT TCCATTTGTT CTGCAAAGGC CGTTATGAAC CTGCTTTTGT TAGATATCCA 
    TTGCAGGAAG CAATGATGAA AGATACATTG GAACGCGCCA AAGAGCCCAA CCTGAACTTG 
    AAAAGCTTCC TTCAAAACGC TTACATCCAC CCAGTTTTTA AAGGCGAAGA CGATAGTGAC 
    AGCGATGAAG CGCCTGAAGA GTTTGAGAAA GAACCTGATC TGGTCCCAAC AAAGCGCCAG 
    TCTCGAAGGA ATACACCATT GCCAAGTAAG CATGGCTCGG CTGCATCCTC CCAGCCTGAA 
    GCTCAGGATT ATCCACTACT TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024450400.1
    CDS546..2849
    Translation

    Target ORF information:

    RefSeq Version XM_024594632.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa CSC1-like protein At3g21620 (LOC7489888), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024594632.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    ATGGCGACAC TGAGTGATAT AGGAGTAGCA GCAGCTATTA ACATTCTCAC TGCGTTTGCT 
    TTCTTCTTCG CATTTGCAAT TCTCCGGATT CAACCAGTCA ATGATAGGGT CTACTTTCCC 
    AAATGGTATA TCAAGGGGTT AAGGAGCAGT CCTTTCGGCA CTGGTGCCTT TGTTGGCAAG 
    GTTGTCAATT TGGACTTCAG GTCATATGTG AGGTTTCTCA ACTGGATGCC TGCGGCATTA 
    CATATGCCGG AACCTGAGCT CATTGACCAT GCTGGATTGG ACTCTGCTGT TTACTTGAGG 
    ATTTACCTGA TAGGGCTTAA GATTTTTGTT CCTATTGCAT TCCTGGCCTT CACTATCCTG 
    GTGCCAGTGA ACTGGACAAA TAGCACTTTG GAGCGTTCTA ATTTGACTTA CAGTGATTTA 
    GATAAGCTCT CTATTTCAAA TATACCCACA GGATCAAACA GATTCTGGAC CCATTTGGTG 
    ATGGCCTATG CCTCTACCTT TTGGACATGC TATGTGCTAA AAAAAGAGTA TGAGATAGTG 
    GCTAAAATGA GGTTGCATTT TCTTGCATCA GAAAAACGAC GTCCTGATCA ATTTACAGTA 
    CTGGTTAGAA ATGTGCCACC AGATGCTGAT GAATCGGTTA GTGAACTCGT GGAGCACTTT 
    TTCCTAGTCA ACCATCCTAA TGATTATCTC ACTTACCAGG TTGTCTACAA TGCTAATCAA 
    CTTTCTCACC TAGTCAACGA GAAGAAAAAG ATGAAGAACT GGCTTGACTA TTATCAAATC 
    AAATATTCAA GAAACAAATC CAGAATGCCC TCCCTCAAGA CTGGTTTTCT TGGCCTTTTC 
    GGGACTAGGG TGGATGCAAT TGATCATTAT ACATCTGAGA TTGAGAGACT GTCTAGAAAA 
    ATCTCCTTGG AGAGAGATGA GACTGTGAAC AATGCCAAGG CAATCATGCC AGCAGCATTT 
    GTTTCCTTCA AAACTCGATG GGGAGCTGCT GTTTGTGCAC AAACACAACA ATCCAGAAAT 
    CCAGCTATGT GGTTGACTGA GTGGGCTCCT GAACCCCGTG ATGTATACTG GGACAACCTC 
    GCAATTCCAT TTGTTTCACT GGCACTAAGA AGGCTCGTTA TCGCTGTCAC ATTTTTCTTC 
    CTTACTTTCT TCTTTATGGT TCCCATTGCA TTTGTACAGT CCCTTGCAAA CATTGAAGGA 
    ATTGAGAAAG CACTCCCGTT CCTGAAACCT ATAATTGAAA TGAAAGTGAT AAAGTCATTC 
    ATTCAAGGTT TCCTTCCTGG AATTGCTTTG AAGATATTTC TTATTTTTCT ACCCTCCATA 
    TTGATGCTAA TGTCTAAATT TGAGGGATTC ATTAGCATAT CAGGCCTAGA AAGGAGATCT 
    GCGGCTAGAT ATTATATCTT CCAGTTCATT AATGTATTTC TCGGAAGCAT AATCACCGGA 
    ACTGCATTTC AACAACTGGA TAATTTTATC CACCAGTCTG CAACTGAAAT ACCAAAGACA 
    ATCGGAGTAT CCATACCTAT GAAAGCAACT TTCTTCATAA CTTACATCAT GGTTGATGGG 
    TGGGCTGGAG TTGCTGGGGA GATTTTAAGA TTGAAACCCT TGATAATCTA TCACCTGAAA 
    ATGTTTTTCA TGGTGAAGAC CGAAAAGGAC ATGGAAGAGG CGATGGATCC AGGAACTCTT 
    GGTTTCAACA CAGGGGAACC ACAAATACAA CTTTATTTCT TACTTGGCCT CGTTTATGCT 
    GTGGTGTCGC CCATCTTACT TCCTTTCATT ATAGTATTCT TTGCCCTCGC ATTTGTTGTG 
    TATCGTCATC AGATTATAAA TGTTTACAAT CAGGAGTATG AGAGTGCTGC AGCATTCTGG 
    CCTGATGTCC ATGGACGCAT CATAGTAGCA GTAATTGTCT CACAGCTGCT GCTAATGGGA 
    TTGTTAAGCA CAAAAGAAGC GGCTCAGTCA ACACCGTTGC TCATTACACT CCCAGTATTG 
    ACAATATGGT TCCATTTGTT CTGCAAAGGC CGTTATGAAC CTGCTTTTGT TAGATATCCA 
    TTGCAGGAAG CAATGATGAA AGATACATTG GAACGCGCCA AAGAGCCCAA CCTGAACTTG 
    AAAAGCTTCC TTCAAAACGC TTACATCCAC CCAGTTTTTA AAGGCGAAGA CGATAGTGAC 
    AGCGATGAAG CGCCTGAAGA GTTTGAGAAA GAACCTGATC TGGTCCCAAC AAAGCGCCAG 
    TCTCGAAGGA ATACACCATT GCCAAGTAAG CATGGCTCGG CTGCATCCTC CCAGCCTGAA 
    GCTCAGGATT ATCCACTACT TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7489888 ( XM_024594633.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024450401.1 Populus trichocarpa CSC1-like protein At3g21620 (LOC7489888), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa424016
    Clone ID Related Accession (Same CDS sequence) XM_024594632.1 , XM_024594633.1
    Accession Version XM_024594633.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2304bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product CSC1-like protein At3g21620
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    ATGGCGACAC TGAGTGATAT AGGAGTAGCA GCAGCTATTA ACATTCTCAC TGCGTTTGCT 
    TTCTTCTTCG CATTTGCAAT TCTCCGGATT CAACCAGTCA ATGATAGGGT CTACTTTCCC 
    AAATGGTATA TCAAGGGGTT AAGGAGCAGT CCTTTCGGCA CTGGTGCCTT TGTTGGCAAG 
    GTTGTCAATT TGGACTTCAG GTCATATGTG AGGTTTCTCA ACTGGATGCC TGCGGCATTA 
    CATATGCCGG AACCTGAGCT CATTGACCAT GCTGGATTGG ACTCTGCTGT TTACTTGAGG 
    ATTTACCTGA TAGGGCTTAA GATTTTTGTT CCTATTGCAT TCCTGGCCTT CACTATCCTG 
    GTGCCAGTGA ACTGGACAAA TAGCACTTTG GAGCGTTCTA ATTTGACTTA CAGTGATTTA 
    GATAAGCTCT CTATTTCAAA TATACCCACA GGATCAAACA GATTCTGGAC CCATTTGGTG 
    ATGGCCTATG CCTCTACCTT TTGGACATGC TATGTGCTAA AAAAAGAGTA TGAGATAGTG 
    GCTAAAATGA GGTTGCATTT TCTTGCATCA GAAAAACGAC GTCCTGATCA ATTTACAGTA 
    CTGGTTAGAA ATGTGCCACC AGATGCTGAT GAATCGGTTA GTGAACTCGT GGAGCACTTT 
    TTCCTAGTCA ACCATCCTAA TGATTATCTC ACTTACCAGG TTGTCTACAA TGCTAATCAA 
    CTTTCTCACC TAGTCAACGA GAAGAAAAAG ATGAAGAACT GGCTTGACTA TTATCAAATC 
    AAATATTCAA GAAACAAATC CAGAATGCCC TCCCTCAAGA CTGGTTTTCT TGGCCTTTTC 
    GGGACTAGGG TGGATGCAAT TGATCATTAT ACATCTGAGA TTGAGAGACT GTCTAGAAAA 
    ATCTCCTTGG AGAGAGATGA GACTGTGAAC AATGCCAAGG CAATCATGCC AGCAGCATTT 
    GTTTCCTTCA AAACTCGATG GGGAGCTGCT GTTTGTGCAC AAACACAACA ATCCAGAAAT 
    CCAGCTATGT GGTTGACTGA GTGGGCTCCT GAACCCCGTG ATGTATACTG GGACAACCTC 
    GCAATTCCAT TTGTTTCACT GGCACTAAGA AGGCTCGTTA TCGCTGTCAC ATTTTTCTTC 
    CTTACTTTCT TCTTTATGGT TCCCATTGCA TTTGTACAGT CCCTTGCAAA CATTGAAGGA 
    ATTGAGAAAG CACTCCCGTT CCTGAAACCT ATAATTGAAA TGAAAGTGAT AAAGTCATTC 
    ATTCAAGGTT TCCTTCCTGG AATTGCTTTG AAGATATTTC TTATTTTTCT ACCCTCCATA 
    TTGATGCTAA TGTCTAAATT TGAGGGATTC ATTAGCATAT CAGGCCTAGA AAGGAGATCT 
    GCGGCTAGAT ATTATATCTT CCAGTTCATT AATGTATTTC TCGGAAGCAT AATCACCGGA 
    ACTGCATTTC AACAACTGGA TAATTTTATC CACCAGTCTG CAACTGAAAT ACCAAAGACA 
    ATCGGAGTAT CCATACCTAT GAAAGCAACT TTCTTCATAA CTTACATCAT GGTTGATGGG 
    TGGGCTGGAG TTGCTGGGGA GATTTTAAGA TTGAAACCCT TGATAATCTA TCACCTGAAA 
    ATGTTTTTCA TGGTGAAGAC CGAAAAGGAC ATGGAAGAGG CGATGGATCC AGGAACTCTT 
    GGTTTCAACA CAGGGGAACC ACAAATACAA CTTTATTTCT TACTTGGCCT CGTTTATGCT 
    GTGGTGTCGC CCATCTTACT TCCTTTCATT ATAGTATTCT TTGCCCTCGC ATTTGTTGTG 
    TATCGTCATC AGATTATAAA TGTTTACAAT CAGGAGTATG AGAGTGCTGC AGCATTCTGG 
    CCTGATGTCC ATGGACGCAT CATAGTAGCA GTAATTGTCT CACAGCTGCT GCTAATGGGA 
    TTGTTAAGCA CAAAAGAAGC GGCTCAGTCA ACACCGTTGC TCATTACACT CCCAGTATTG 
    ACAATATGGT TCCATTTGTT CTGCAAAGGC CGTTATGAAC CTGCTTTTGT TAGATATCCA 
    TTGCAGGAAG CAATGATGAA AGATACATTG GAACGCGCCA AAGAGCCCAA CCTGAACTTG 
    AAAAGCTTCC TTCAAAACGC TTACATCCAC CCAGTTTTTA AAGGCGAAGA CGATAGTGAC 
    AGCGATGAAG CGCCTGAAGA GTTTGAGAAA GAACCTGATC TGGTCCCAAC AAAGCGCCAG 
    TCTCGAAGGA ATACACCATT GCCAAGTAAG CATGGCTCGG CTGCATCCTC CCAGCCTGAA 
    GCTCAGGATT ATCCACTACT TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024450401.1
    CDS86..2389
    Translation

    Target ORF information:

    RefSeq Version XM_024594633.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa CSC1-like protein At3g21620 (LOC7489888), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024594633.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    ATGGCGACAC TGAGTGATAT AGGAGTAGCA GCAGCTATTA ACATTCTCAC TGCGTTTGCT 
    TTCTTCTTCG CATTTGCAAT TCTCCGGATT CAACCAGTCA ATGATAGGGT CTACTTTCCC 
    AAATGGTATA TCAAGGGGTT AAGGAGCAGT CCTTTCGGCA CTGGTGCCTT TGTTGGCAAG 
    GTTGTCAATT TGGACTTCAG GTCATATGTG AGGTTTCTCA ACTGGATGCC TGCGGCATTA 
    CATATGCCGG AACCTGAGCT CATTGACCAT GCTGGATTGG ACTCTGCTGT TTACTTGAGG 
    ATTTACCTGA TAGGGCTTAA GATTTTTGTT CCTATTGCAT TCCTGGCCTT CACTATCCTG 
    GTGCCAGTGA ACTGGACAAA TAGCACTTTG GAGCGTTCTA ATTTGACTTA CAGTGATTTA 
    GATAAGCTCT CTATTTCAAA TATACCCACA GGATCAAACA GATTCTGGAC CCATTTGGTG 
    ATGGCCTATG CCTCTACCTT TTGGACATGC TATGTGCTAA AAAAAGAGTA TGAGATAGTG 
    GCTAAAATGA GGTTGCATTT TCTTGCATCA GAAAAACGAC GTCCTGATCA ATTTACAGTA 
    CTGGTTAGAA ATGTGCCACC AGATGCTGAT GAATCGGTTA GTGAACTCGT GGAGCACTTT 
    TTCCTAGTCA ACCATCCTAA TGATTATCTC ACTTACCAGG TTGTCTACAA TGCTAATCAA 
    CTTTCTCACC TAGTCAACGA GAAGAAAAAG ATGAAGAACT GGCTTGACTA TTATCAAATC 
    AAATATTCAA GAAACAAATC CAGAATGCCC TCCCTCAAGA CTGGTTTTCT TGGCCTTTTC 
    GGGACTAGGG TGGATGCAAT TGATCATTAT ACATCTGAGA TTGAGAGACT GTCTAGAAAA 
    ATCTCCTTGG AGAGAGATGA GACTGTGAAC AATGCCAAGG CAATCATGCC AGCAGCATTT 
    GTTTCCTTCA AAACTCGATG GGGAGCTGCT GTTTGTGCAC AAACACAACA ATCCAGAAAT 
    CCAGCTATGT GGTTGACTGA GTGGGCTCCT GAACCCCGTG ATGTATACTG GGACAACCTC 
    GCAATTCCAT TTGTTTCACT GGCACTAAGA AGGCTCGTTA TCGCTGTCAC ATTTTTCTTC 
    CTTACTTTCT TCTTTATGGT TCCCATTGCA TTTGTACAGT CCCTTGCAAA CATTGAAGGA 
    ATTGAGAAAG CACTCCCGTT CCTGAAACCT ATAATTGAAA TGAAAGTGAT AAAGTCATTC 
    ATTCAAGGTT TCCTTCCTGG AATTGCTTTG AAGATATTTC TTATTTTTCT ACCCTCCATA 
    TTGATGCTAA TGTCTAAATT TGAGGGATTC ATTAGCATAT CAGGCCTAGA AAGGAGATCT 
    GCGGCTAGAT ATTATATCTT CCAGTTCATT AATGTATTTC TCGGAAGCAT AATCACCGGA 
    ACTGCATTTC AACAACTGGA TAATTTTATC CACCAGTCTG CAACTGAAAT ACCAAAGACA 
    ATCGGAGTAT CCATACCTAT GAAAGCAACT TTCTTCATAA CTTACATCAT GGTTGATGGG 
    TGGGCTGGAG TTGCTGGGGA GATTTTAAGA TTGAAACCCT TGATAATCTA TCACCTGAAA 
    ATGTTTTTCA TGGTGAAGAC CGAAAAGGAC ATGGAAGAGG CGATGGATCC AGGAACTCTT 
    GGTTTCAACA CAGGGGAACC ACAAATACAA CTTTATTTCT TACTTGGCCT CGTTTATGCT 
    GTGGTGTCGC CCATCTTACT TCCTTTCATT ATAGTATTCT TTGCCCTCGC ATTTGTTGTG 
    TATCGTCATC AGATTATAAA TGTTTACAAT CAGGAGTATG AGAGTGCTGC AGCATTCTGG 
    CCTGATGTCC ATGGACGCAT CATAGTAGCA GTAATTGTCT CACAGCTGCT GCTAATGGGA 
    TTGTTAAGCA CAAAAGAAGC GGCTCAGTCA ACACCGTTGC TCATTACACT CCCAGTATTG 
    ACAATATGGT TCCATTTGTT CTGCAAAGGC CGTTATGAAC CTGCTTTTGT TAGATATCCA 
    TTGCAGGAAG CAATGATGAA AGATACATTG GAACGCGCCA AAGAGCCCAA CCTGAACTTG 
    AAAAGCTTCC TTCAAAACGC TTACATCCAC CCAGTTTTTA AAGGCGAAGA CGATAGTGAC 
    AGCGATGAAG CGCCTGAAGA GTTTGAGAAA GAACCTGATC TGGTCCCAAC AAAGCGCCAG 
    TCTCGAAGGA ATACACCATT GCCAAGTAAG CATGGCTCGG CTGCATCCTC CCAGCCTGAA 
    GCTCAGGATT ATCCACTACT TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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