ORF » Species Summary » Populus trichocarpa » POPTR_0012s13630g cDNA ORF clone

POPTR_0012s13630g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0012s13630g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0012s13630g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa26764 XM_002318799.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0012s13630g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
OPa440533 XM_024582212.1
Latest version!		 Populus trichocarpa probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 (LOC7484402), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0012s13630g ( XM_002318799.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002318835.2 Populus trichocarpa hypothetical protein (POPTR_0012s13630g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa26764
    Clone ID Related Accession (Same CDS sequence) XM_002318799.2
    Accession Version XM_002318799.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1524bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008478). On Dec 16, 2013 this sequence version replaced XM_002318799.1. COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGTTTCAA TAAGTGTTTT AGCAAACTCC TATCCATCTT TTCCCATGTT GTTTCTTCTA 
    GCAATATTAT TGTTGCTTTC CTTTGTCCTA AAACACAAAT CTTCCAAGGT CCCGGCCATT 
    CCACCAGGGC CAAAATCATG GCCTATTATA GGAAATGTAC TTCAAATGGG AAACAAGCCC 
    CATATTTCCT TGACTAAATT AGCACAGGTT TATGGTCCAC TCATGTCCCT CCGACTAGGG 
    ACTCAACTTG TTGTGGTAGG GTCTTCTCGG GAAGCAGCCT CCGAAATCCT CAAGACTCAT 
    GACCGAGAAC TCTCCGGCCG GTGTGTGCCT CACGCATCCT TTGCTAAGGA CCCTAAGCTG 
    AATGAGGACT CCATAGCGTG GACGTTTGAG TGCACCGACC GATGGAGGTT CTTTCGTTCC 
    CTGATGAGGA ATGAGCTATT CTCTTCTAAA GTCGTTGATG GACAGTCAAG AACAAGAGAA 
    ACCAAGGCCA GAGAAATGAT AGATTTCTTG AAAAAGAAGG AAGGAGAGGG AGTCAAAATA 
    CGAGATATTG TGTTTGTTTA TACATTTAAT GCATTGGCGA ACATTTACTT ATCAAAAGAC 
    TTGGTAGATT ATGATCAAAT TGGAGAGTGT CAAAGAGTGT GTGGGCTTGT AAGGGAAATG 
    ATGGAGTTAC ATACAACTCT AAACATATCG GATTTGTATC CTATACTAGG TAGTTTGGAT 
    CTTCAAGGTG TGAGTAGAAA GTGTAATGAG TGCGAGAGTA GAATTCAAGA ATTATGGGGG 
    AGTGTCATCA AAGAACGCAG AGAAGGCCGC AACGATACAG GAGATGATGA TGATAATTCC 
    AGTAAACGTA AAGATTTTCT TGATGTTTTG CTTGATGGGG AATTTTCTGA TGAGCAAATC 
    AGTTTATTCT TCGTGCAGGA ACTCTTAGCT GCAGTATCGG ATAGTACTAG CTCAACAGTC 
    GACTGGGCGA TGGCAGAACT GATGAGGAAT CCACAAGCAA TGAAACAACT TCGCGAAGAA 
    CTTGCTGGAG AAACTCCTGA AGACTTGATA ACAGAATCAA GCCTAGCAAA ATTCCCTTAC 
    TTGCATTTAT GTGTCAAGGA AACTTTGAGA TTACACCCTC CAGCACCATT TCTAATACCT 
    CACCGAGCAA CAGAAGATTG TCAAGTTTTG GACTGCACCA TACCAAAGGA CACCCAAGTT 
    CTTGTGAATG TATGGGCAAT TGCAAGAGAC CCTGCCAGTT GGGAAGACCC TTTGTGTTTT 
    AAACCTGAAA GATTCCTGAA TTCTGATCTG GATTACAAAG GAAACCATTT TGAGTTTTTG 
    CCTTTTGGAA GTGGAAGGAG GATTTGTGCC GGGTTACCAA TGGCTGTTAA GAAAGTTCAG 
    CTGGCTTTGG CCAATTTAAT CCATGGCTTT GACTGGTCTC TACCAAATAA CATGCTTCCT 
    GATGAACTAA ACATGGATGA GAAGTATGGT ATCACACTGA TGAAGGAGCA ACCTCTTAAG 
    CTTATACCGA AATTGAGGAA ATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002318835.2
    CDS1..1524
    Translation

    Target ORF information:

    RefSeq Version XM_002318799.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0012s13630g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002318799.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGTTTCAA TAAGTGTTTT AGCAAACTCC TATCCATCTT TTCCCATGTT GTTTCTTCTA 
    GCAATATTAT TGTTGCTTTC CTTTGTCCTA AAACACAAAT CTTCCAAGGT CCCGGCCATT 
    CCACCAGGGC CAAAATCATG GCCTATTATA GGAAATGTAC TTCAAATGGG AAACAAGCCC 
    CATATTTCCT TGACTAAATT AGCACAGGTT TATGGTCCAC TCATGTCCCT CCGACTAGGG 
    ACTCAACTTG TTGTGGTAGG GTCTTCTCGG GAAGCAGCCT CCGAAATCCT CAAGACTCAT 
    GACCGAGAAC TCTCCGGCCG GTGTGTGCCT CACGCATCCT TTGCTAAGGA CCCTAAGCTG 
    AATGAGGACT CCATAGCGTG GACGTTTGAG TGCACCGACC GATGGAGGTT CTTTCGTTCC 
    CTGATGAGGA ATGAGCTATT CTCTTCTAAA GTCGTTGATG GACAGTCAAG AACAAGAGAA 
    ACCAAGGCCA GAGAAATGAT AGATTTCTTG AAAAAGAAGG AAGGAGAGGG AGTCAAAATA 
    CGAGATATTG TGTTTGTTTA TACATTTAAT GCATTGGCGA ACATTTACTT ATCAAAAGAC 
    TTGGTAGATT ATGATCAAAT TGGAGAGTGT CAAAGAGTGT GTGGGCTTGT AAGGGAAATG 
    ATGGAGTTAC ATACAACTCT AAACATATCG GATTTGTATC CTATACTAGG TAGTTTGGAT 
    CTTCAAGGTG TGAGTAGAAA GTGTAATGAG TGCGAGAGTA GAATTCAAGA ATTATGGGGG 
    AGTGTCATCA AAGAACGCAG AGAAGGCCGC AACGATACAG GAGATGATGA TGATAATTCC 
    AGTAAACGTA AAGATTTTCT TGATGTTTTG CTTGATGGGG AATTTTCTGA TGAGCAAATC 
    AGTTTATTCT TCGTGCAGGA ACTCTTAGCT GCAGTATCGG ATAGTACTAG CTCAACAGTC 
    GACTGGGCGA TGGCAGAACT GATGAGGAAT CCACAAGCAA TGAAACAACT TCGCGAAGAA 
    CTTGCTGGAG AAACTCCTGA AGACTTGATA ACAGAATCAA GCCTAGCAAA ATTCCCTTAC 
    TTGCATTTAT GTGTCAAGGA AACTTTGAGA TTACACCCTC CAGCACCATT TCTAATACCT 
    CACCGAGCAA CAGAAGATTG TCAAGTTTTG GACTGCACCA TACCAAAGGA CACCCAAGTT 
    CTTGTGAATG TATGGGCAAT TGCAAGAGAC CCTGCCAGTT GGGAAGACCC TTTGTGTTTT 
    AAACCTGAAA GATTCCTGAA TTCTGATCTG GATTACAAAG GAAACCATTT TGAGTTTTTG 
    CCTTTTGGAA GTGGAAGGAG GATTTGTGCC GGGTTACCAA TGGCTGTTAA GAAAGTTCAG 
    CTGGCTTTGG CCAATTTAAT CCATGGCTTT GACTGGTCTC TACCAAATAA CATGCTTCCT 
    GATGAACTAA ACATGGATGA GAAGTATGGT ATCACACTGA TGAAGGAGCA ACCTCTTAAG 
    CTTATACCGA AATTGAGGAA ATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0012s13630g ( XM_024582212.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024437980.1 Populus trichocarpa probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 (LOC7484402), mRNA.
    Price & Availability↑
    CloneID OPa440533
    Clone ID Related Accession (Same CDS sequence) XM_024582212.1
    Accession Version XM_024582212.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1518bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037296.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGTTTCAA TAAGTGTTTT AGCAAACTCC TATCCATCTT TTCCCATGTT GTTTCTTCTA 
    GCAATATTAT TGTTGCTTTC CTTTGTCCTA AAACACAAAT CTTCCAAGGT CCCGGCCATT 
    CCACCAGGGC CAAAATCATG GCCTATTATA GGAAATGTAC TTCAAATGGG AAACAAGCCC 
    CATATTTCCT TGACTAAATT AGCACAGGTT TATGGTCCAC TCATGTCCCT CCGACTAGGG 
    ACTCAACTTG TTGTGGTAGG GTCTTCTCGG GAAGCAGCCT CCGAAATCCT CAAGACTCAT 
    GACCGAGAAC TCTCCGGCCG GTGTGTGCCT CACGCATCCT TTGCTAAGGA CCCTAAGCTG 
    AATGAGGACT CCATAGCGTG GACGTTTGAG TGCACCGACC GATGGAGGTT CTTTCGTTCC 
    CTGATGAGGA ATGAGCTATT CTCTTCTAAA GTCGTTGATG GACAGTCAAG AACAAGAGAA 
    ACCAAGGCCA GAGAAATGAT AGATTTCTTG AAAAAGAAGG AAGGAGAGGG AGTCAAAATA 
    CGAGATATTG TGTTTGTTTA TACATTTAAT GCATTGGCGA ACATTTACTT ATCAAAAGAC 
    TTGGTAGATT ATGATCAAAT TGGAGAGTGT CAAAGAGTGT GTGGGCTTGT AAGGGAAATG 
    ATGGAGTTAC ATACAACTCT AAACATATCG GATTTGTATC CTATACTAGG TAGTTTGGAT 
    CTTCAAGGTG TGAGTAGAAA GTGTAATGAG TGCGAGAGTA GAATTCAAGA ATTATGGGGG 
    AGTGTCATCA AAGAACGCAG AGAAGGCCGC AACGATACAG GAGATGATGA TAATTCCAGT 
    AAACGTAAAG ATTTTCTTGA TGTTTTGCTT GATGGGGAAT TTTCTGATGA GCAAATCAGT 
    TTATTCTTCG TGGAACTCTT AGCTGCAGTA TCGGATAGTA CTAGCTCAAC AGTCGACTGG 
    GCGATGGCAG AACTGATGAG GAATCCACAA GCAATGAAAC AACTTCGCGA AGAACTTGCT 
    GGAGAAACTC CTGAAGACTT GATAACAGAA TCAAGCCTAG CAAAATTCCC TTACTTGCAT 
    TTTTGTGTCA AGGAAACTTT GAGATTACAC CCTCCAGCAC CATTTCTAAT ACCTCACCGA 
    GCAACAGAAG ATTGTCAAGT TTTGGACTGC ACCATACCAA AGGACACCCA AGTTCTTGTG 
    AATGTATGGG CAATTGCAAG AGACCCTGCC AGTTGGGAAG ACCCTTTGTG TTTTAAACCT 
    GAAAGATTCC TGAATTCTGA TCTGGATTAC AAAGGAAACC ATTTTGAGTT TTTGCCTTTT 
    GGAAGTGGAA GGAGGATTTG TGCCGGGTTA CCAATGGCTG TTAAGAAAGT TCAGCTGGCT 
    TTGGCCAATT TAATCCATGG CTTTGACTGG TCTCTACCAA ATAACATGCT TCCTGATGAA 
    CTAAACATGG ATGAGAAGTA TGGTATCACA CTGATGAAGG AGCAACCTCT TAAGCTTATA 
    CCGAAATTGA GGAAATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024437980.1
    CDS85..1602
    Translation

    Target ORF information:

    RefSeq Version XM_024582212.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 (LOC7484402), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024582212.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGTTTCAA TAAGTGTTTT AGCAAACTCC TATCCATCTT TTCCCATGTT GTTTCTTCTA 
    GCAATATTAT TGTTGCTTTC CTTTGTCCTA AAACACAAAT CTTCCAAGGT CCCGGCCATT 
    CCACCAGGGC CAAAATCATG GCCTATTATA GGAAATGTAC TTCAAATGGG AAACAAGCCC 
    CATATTTCCT TGACTAAATT AGCACAGGTT TATGGTCCAC TCATGTCCCT CCGACTAGGG 
    ACTCAACTTG TTGTGGTAGG GTCTTCTCGG GAAGCAGCCT CCGAAATCCT CAAGACTCAT 
    GACCGAGAAC TCTCCGGCCG GTGTGTGCCT CACGCATCCT TTGCTAAGGA CCCTAAGCTG 
    AATGAGGACT CCATAGCGTG GACGTTTGAG TGCACCGACC GATGGAGGTT CTTTCGTTCC 
    CTGATGAGGA ATGAGCTATT CTCTTCTAAA GTCGTTGATG GACAGTCAAG AACAAGAGAA 
    ACCAAGGCCA GAGAAATGAT AGATTTCTTG AAAAAGAAGG AAGGAGAGGG AGTCAAAATA 
    CGAGATATTG TGTTTGTTTA TACATTTAAT GCATTGGCGA ACATTTACTT ATCAAAAGAC 
    TTGGTAGATT ATGATCAAAT TGGAGAGTGT CAAAGAGTGT GTGGGCTTGT AAGGGAAATG 
    ATGGAGTTAC ATACAACTCT AAACATATCG GATTTGTATC CTATACTAGG TAGTTTGGAT 
    CTTCAAGGTG TGAGTAGAAA GTGTAATGAG TGCGAGAGTA GAATTCAAGA ATTATGGGGG 
    AGTGTCATCA AAGAACGCAG AGAAGGCCGC AACGATACAG GAGATGATGA TAATTCCAGT 
    AAACGTAAAG ATTTTCTTGA TGTTTTGCTT GATGGGGAAT TTTCTGATGA GCAAATCAGT 
    TTATTCTTCG TGGAACTCTT AGCTGCAGTA TCGGATAGTA CTAGCTCAAC AGTCGACTGG 
    GCGATGGCAG AACTGATGAG GAATCCACAA GCAATGAAAC AACTTCGCGA AGAACTTGCT 
    GGAGAAACTC CTGAAGACTT GATAACAGAA TCAAGCCTAG CAAAATTCCC TTACTTGCAT 
    TTTTGTGTCA AGGAAACTTT GAGATTACAC CCTCCAGCAC CATTTCTAAT ACCTCACCGA 
    GCAACAGAAG ATTGTCAAGT TTTGGACTGC ACCATACCAA AGGACACCCA AGTTCTTGTG 
    AATGTATGGG CAATTGCAAG AGACCCTGCC AGTTGGGAAG ACCCTTTGTG TTTTAAACCT 
    GAAAGATTCC TGAATTCTGA TCTGGATTAC AAAGGAAACC ATTTTGAGTT TTTGCCTTTT 
    GGAAGTGGAA GGAGGATTTG TGCCGGGTTA CCAATGGCTG TTAAGAAAGT TCAGCTGGCT 
    TTGGCCAATT TAATCCATGG CTTTGACTGG TCTCTACCAA ATAACATGCT TCCTGATGAA 
    CTAAACATGG ATGAGAAGTA TGGTATCACA CTGATGAAGG AGCAACCTCT TAAGCTTATA 
    CCGAAATTGA GGAAATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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