ORF » Species Summary » Populus trichocarpa » LOC7478826 cDNA ORF clone

LOC7478826 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7478826 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7478826 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa05880 XM_002302663.3
Latest version!		 Populus trichocarpa suppressor of disruption of TFIIS (LOC7478826), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
OPa425346 XM_024596176.1
Latest version!		 Populus trichocarpa suppressor of disruption of TFIIS (LOC7478826), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
View Old Accession Versions >>
OPa05880 XM_002302663.2 Populus trichocarpa haloacid dehalogenase-like hydrolase family protein (POPTR_0002s18620g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7478826 ( XM_002302663.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002302699.2 Populus trichocarpa haloacid dehalogenase-like hydrolase family protein (POPTR_0002s18620g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa05880
    Clone ID Related Accession (Same CDS sequence) XM_002302663.2 , XM_002302663.3
    Accession Version XM_002302663.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 918bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product haloacid dehalogenase-like hydrolase family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008468). On Dec 16, 2013 this sequence version replaced XM_002302663.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGGATCGT TAGGTAACCT TCTTAAGATG GACGCTGCTG GGAGGGCCAA CGGACCAAAA 
    TACGAGTGCT TGCTCTTTGA CATGGATGAT ACGTTGTACC CCTTGAGTTT GGGTCTCAAC 
    ATGGCTTGCC GAAAGAACAT TGAAGAGTTC ATGTTGCATC AGCTACATAT TGAGGAAAGT 
    GAAGTTCCGA GAATGTGCTT GGAATTATAC AGGGAGCATG GAACAACAAT GGCAGGTCTA 
    AAGGCTCTTG GCTATGAGTT TGATAACGAT GAGTTTCATG CTTTCGTTCA TGGAAGATTG 
    CCTTATGAAA CACTGAAGCC TGATCCGGTG CTAAGGAACA TTCTACTTTC CGTCCCACAG 
    CGTAAAATAA TCTTCACAAA CGCTGATAAG GCGCATGCAG CTGAGGTTCT CAAAAGGATG 
    GGATTCGAGG ATTGTTTCGA AGGCGTCATT TGCTTTGAAA CCCTTAATCC TCCTCTAGAA 
    ATTGCAAATA ACATGGATGC ATTAGATAAT GATGCAATGA TTGCAGGAGG TGAGCCAGAG 
    CCAAGTGGCT TCGATGGTAC TATTGCCACT GGAAACAAAA ATAAAATAAA AAATGATTTA 
    GATAATGGTA TCAGCTCCAA GTCACGAATC CTCTGTAAAC CCTCTCTGGA GGCCATTGAA 
    GCAGCTATTC AGATTGCAAA TGTGGACCCA AGGAAGACAA TCTTCTTTGA CGACAGTGCT 
    CGAAACATTG CAAGTGGGAA AGCAGCAGGA CTTCATACAG TTATTGTAGG GAGCTCGGTC 
    CTTGTACCAG GTGCAGACAA TGCCTTGAGA AGCATCCACA ATATCAAAGA AGCAATACCT 
    GAAATTTGGG AGGATGAAGG AGAGGAGATG GAGCTAGTTA TCCAGTCCAC TACAGTCGAA 
    ACAATGATCC TTGCTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002302699.2
    CDS12..929
    Translation

    Target ORF information:

    RefSeq Version XM_002302663.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa haloacid dehalogenase-like hydrolase family protein (POPTR_0002s18620g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002302663.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGGATCGT TAGGTAACCT TCTTAAGATG GACGCTGCTG GGAGGGCCAA CGGACCAAAA 
    TACGAGTGCT TGCTCTTTGA CATGGATGAT ACGTTGTACC CCTTGAGTTT GGGTCTCAAC 
    ATGGCTTGCC GAAAGAACAT TGAAGAGTTC ATGTTGCATC AGCTACATAT TGAGGAAAGT 
    GAAGTTCCGA GAATGTGCTT GGAATTATAC AGGGAGCATG GAACAACAAT GGCAGGTCTA 
    AAGGCTCTTG GCTATGAGTT TGATAACGAT GAGTTTCATG CTTTCGTTCA TGGAAGATTG 
    CCTTATGAAA CACTGAAGCC TGATCCGGTG CTAAGGAACA TTCTACTTTC CGTCCCACAG 
    CGTAAAATAA TCTTCACAAA CGCTGATAAG GCGCATGCAG CTGAGGTTCT CAAAAGGATG 
    GGATTCGAGG ATTGTTTCGA AGGCGTCATT TGCTTTGAAA CCCTTAATCC TCCTCTAGAA 
    ATTGCAAATA ACATGGATGC ATTAGATAAT GATGCAATGA TTGCAGGAGG TGAGCCAGAG 
    CCAAGTGGCT TCGATGGTAC TATTGCCACT GGAAACAAAA ATAAAATAAA AAATGATTTA 
    GATAATGGTA TCAGCTCCAA GTCACGAATC CTCTGTAAAC CCTCTCTGGA GGCCATTGAA 
    GCAGCTATTC AGATTGCAAA TGTGGACCCA AGGAAGACAA TCTTCTTTGA CGACAGTGCT 
    CGAAACATTG CAAGTGGGAA AGCAGCAGGA CTTCATACAG TTATTGTAGG GAGCTCGGTC 
    CTTGTACCAG GTGCAGACAA TGCCTTGAGA AGCATCCACA ATATCAAAGA AGCAATACCT 
    GAAATTTGGG AGGATGAAGG AGAGGAGATG GAGCTAGTTA TCCAGTCCAC TACAGTCGAA 
    ACAATGATCC TTGCTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7478826 ( XM_002302663.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002302699.2 Populus trichocarpa suppressor of disruption of TFIIS (LOC7478826), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa05880
    Clone ID Related Accession (Same CDS sequence) XM_002302663.2 , XM_002302663.3
    Accession Version XM_002302663.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 918bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product suppressor of disruption of TFIIS isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002302663.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGGATCGT TAGGTAACCT TCTTAAGATG GACGCTGCTG GGAGGGCCAA CGGACCAAAA 
    TACGAGTGCT TGCTCTTTGA CATGGATGAT ACGTTGTACC CCTTGAGTTT GGGTCTCAAC 
    ATGGCTTGCC GAAAGAACAT TGAAGAGTTC ATGTTGCATC AGCTACATAT TGAGGAAAGT 
    GAAGTTCCGA GAATGTGCTT GGAATTATAC AGGGAGCATG GAACAACAAT GGCAGGTCTA 
    AAGGCTCTTG GCTATGAGTT TGATAACGAT GAGTTTCATG CTTTCGTTCA TGGAAGATTG 
    CCTTATGAAA CACTGAAGCC TGATCCGGTG CTAAGGAACA TTCTACTTTC CGTCCCACAG 
    CGTAAAATAA TCTTCACAAA CGCTGATAAG GCGCATGCAG CTGAGGTTCT CAAAAGGATG 
    GGATTCGAGG ATTGTTTCGA AGGCGTCATT TGCTTTGAAA CCCTTAATCC TCCTCTAGAA 
    ATTGCAAATA ACATGGATGC ATTAGATAAT GATGCAATGA TTGCAGGAGG TGAGCCAGAG 
    CCAAGTGGCT TCGATGGTAC TATTGCCACT GGAAACAAAA ATAAAATAAA AAATGATTTA 
    GATAATGGTA TCAGCTCCAA GTCACGAATC CTCTGTAAAC CCTCTCTGGA GGCCATTGAA 
    GCAGCTATTC AGATTGCAAA TGTGGACCCA AGGAAGACAA TCTTCTTTGA CGACAGTGCT 
    CGAAACATTG CAAGTGGGAA AGCAGCAGGA CTTCATACAG TTATTGTAGG GAGCTCGGTC 
    CTTGTACCAG GTGCAGACAA TGCCTTGAGA AGCATCCACA ATATCAAAGA AGCAATACCT 
    GAAATTTGGG AGGATGAAGG AGAGGAGATG GAGCTAGTTA TCCAGTCCAC TACAGTCGAA 
    ACAATGATCC TTGCTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002302699.2
    CDS116..1033
    Translation

    Target ORF information:

    RefSeq Version XM_002302663.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa suppressor of disruption of TFIIS (LOC7478826), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002302663.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGGATCGT TAGGTAACCT TCTTAAGATG GACGCTGCTG GGAGGGCCAA CGGACCAAAA 
    TACGAGTGCT TGCTCTTTGA CATGGATGAT ACGTTGTACC CCTTGAGTTT GGGTCTCAAC 
    ATGGCTTGCC GAAAGAACAT TGAAGAGTTC ATGTTGCATC AGCTACATAT TGAGGAAAGT 
    GAAGTTCCGA GAATGTGCTT GGAATTATAC AGGGAGCATG GAACAACAAT GGCAGGTCTA 
    AAGGCTCTTG GCTATGAGTT TGATAACGAT GAGTTTCATG CTTTCGTTCA TGGAAGATTG 
    CCTTATGAAA CACTGAAGCC TGATCCGGTG CTAAGGAACA TTCTACTTTC CGTCCCACAG 
    CGTAAAATAA TCTTCACAAA CGCTGATAAG GCGCATGCAG CTGAGGTTCT CAAAAGGATG 
    GGATTCGAGG ATTGTTTCGA AGGCGTCATT TGCTTTGAAA CCCTTAATCC TCCTCTAGAA 
    ATTGCAAATA ACATGGATGC ATTAGATAAT GATGCAATGA TTGCAGGAGG TGAGCCAGAG 
    CCAAGTGGCT TCGATGGTAC TATTGCCACT GGAAACAAAA ATAAAATAAA AAATGATTTA 
    GATAATGGTA TCAGCTCCAA GTCACGAATC CTCTGTAAAC CCTCTCTGGA GGCCATTGAA 
    GCAGCTATTC AGATTGCAAA TGTGGACCCA AGGAAGACAA TCTTCTTTGA CGACAGTGCT 
    CGAAACATTG CAAGTGGGAA AGCAGCAGGA CTTCATACAG TTATTGTAGG GAGCTCGGTC 
    CTTGTACCAG GTGCAGACAA TGCCTTGAGA AGCATCCACA ATATCAAAGA AGCAATACCT 
    GAAATTTGGG AGGATGAAGG AGAGGAGATG GAGCTAGTTA TCCAGTCCAC TACAGTCGAA 
    ACAATGATCC TTGCTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7478826 ( XM_024596176.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024451944.1 Populus trichocarpa suppressor of disruption of TFIIS (LOC7478826), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa425346
    Clone ID Related Accession (Same CDS sequence) XM_024596176.1
    Accession Version XM_024596176.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 945bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product suppressor of disruption of TFIIS isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGGATCGT TAGGTTCTCA AACCGGGGAA AGTCTTGCAG GTAACCTTCT TAAGATGGAC 
    GCTGCTGGGA GGGCCAACGG ACCAAAATAC GAGTGCTTGC TCTTTGACAT GGATGATACG 
    TTGTACCCCT TGAGTTTGGG TCTCAACATG GCTTGCCGAA AGAACATTGA AGAGTTCATG 
    TTGCATCAGC TACATATTGA GGAAAGTGAA GTTCCGAGAA TGTGCTTGGA ATTATACAGG 
    GAGCATGGAA CAACAATGGC AGGTCTAAAG GCTCTTGGCT ATGAGTTTGA TAACGATGAG 
    TTTCATGCTT TCGTTCATGG AAGATTGCCT TATGAAACAC TGAAGCCTGA TCCGGTGCTA 
    AGGAACATTC TACTTTCCGT CCCACAGCGT AAAATAATCT TCACAAACGC TGATAAGGCG 
    CATGCAGCTG AGGTTCTCAA AAGGATGGGA TTCGAGGATT GTTTCGAAGG CGTCATTTGC 
    TTTGAAACCC TTAATCCTCC TCTAGAAATT GCAAATAACA TGGATGCATT AGATAATGAT 
    GCAATGATTG CAGGAGGTGA GCCAGAGCCA AGTGGCTTCG ATGGTACTAT TGCCACTGGA 
    AACAAAAATA AAATAAAAAA TGATTTAGAT AATGGTATCA GCTCCAAGTC ACGAATCCTC 
    TGTAAACCCT CTCTGGAGGC CATTGAAGCA GCTATTCAGA TTGCAAATGT GGACCCAAGG 
    AAGACAATCT TCTTTGACGA CAGTGCTCGA AACATTGCAA GTGGGAAAGC AGCAGGACTT 
    CATACAGTTA TTGTAGGGAG CTCGGTCCTT GTACCAGGTG CAGACAATGC CTTGAGAAGC 
    ATCCACAATA TCAAAGAAGC AATACCTGAA ATTTGGGAGG ATGAAGGAGA GGAGATGGAG 
    CTAGTTATCC AGTCCACTAC AGTCGAAACA ATGATCCTTG CTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024451944.1
    CDS5..949
    Translation

    Target ORF information:

    RefSeq Version XM_024596176.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa suppressor of disruption of TFIIS (LOC7478826), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024596176.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGGATCGT TAGGTTCTCA AACCGGGGAA AGTCTTGCAG GTAACCTTCT TAAGATGGAC 
    GCTGCTGGGA GGGCCAACGG ACCAAAATAC GAGTGCTTGC TCTTTGACAT GGATGATACG 
    TTGTACCCCT TGAGTTTGGG TCTCAACATG GCTTGCCGAA AGAACATTGA AGAGTTCATG 
    TTGCATCAGC TACATATTGA GGAAAGTGAA GTTCCGAGAA TGTGCTTGGA ATTATACAGG 
    GAGCATGGAA CAACAATGGC AGGTCTAAAG GCTCTTGGCT ATGAGTTTGA TAACGATGAG 
    TTTCATGCTT TCGTTCATGG AAGATTGCCT TATGAAACAC TGAAGCCTGA TCCGGTGCTA 
    AGGAACATTC TACTTTCCGT CCCACAGCGT AAAATAATCT TCACAAACGC TGATAAGGCG 
    CATGCAGCTG AGGTTCTCAA AAGGATGGGA TTCGAGGATT GTTTCGAAGG CGTCATTTGC 
    TTTGAAACCC TTAATCCTCC TCTAGAAATT GCAAATAACA TGGATGCATT AGATAATGAT 
    GCAATGATTG CAGGAGGTGA GCCAGAGCCA AGTGGCTTCG ATGGTACTAT TGCCACTGGA 
    AACAAAAATA AAATAAAAAA TGATTTAGAT AATGGTATCA GCTCCAAGTC ACGAATCCTC 
    TGTAAACCCT CTCTGGAGGC CATTGAAGCA GCTATTCAGA TTGCAAATGT GGACCCAAGG 
    AAGACAATCT TCTTTGACGA CAGTGCTCGA AACATTGCAA GTGGGAAAGC AGCAGGACTT 
    CATACAGTTA TTGTAGGGAG CTCGGTCCTT GTACCAGGTG CAGACAATGC CTTGAGAAGC 
    ATCCACAATA TCAAAGAAGC AATACCTGAA ATTTGGGAGG ATGAAGGAGA GGAGATGGAG 
    CTAGTTATCC AGTCCACTAC AGTCGAAACA ATGATCCTTG CTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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