LOC7477768 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7477768 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7477768 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa01235 XM_002299332.2
Latest version!
Populus trichocarpa U2 small nuclear ribonucleoprotein A' (POPTR_0001s12570g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
OPa421525 XM_002299332.3
Latest version!
Populus trichocarpa U2 small nuclear ribonucleoprotein A' (LOC7477768), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OPa01235
    Clone ID Related Accession (Same CDS sequence) XM_002299332.2
    Accession Version XM_002299332.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 855bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product U2 small nuclear ribonucleoprotein A'
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). On Dec 16, 2013 this sequence version replaced XM_002299332.1.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGTGAGAC TGACAGCCGA CTTGGTTTGG AAAAGCCCTC ATTTCTTCAA TGCCATCAAG 
    GAGCGCGAAT TAGATCTTCG AGGTAACAAG ATTCCTGTAA TCGAAAACCT GGGTGCTACT
    GAGGACCAAT TTGATACCAT CGATTTGTCT GACAACGAGA TTGTCAAGCT TGAAAACATG
    CCCTATCTTA ATCGGCTGGG CACTTTGATA ATCAACAACA ACAGAATTAC CCGTATCAAT
    CCTAACATTG GAGAGTACTT GCCAAAACTT CACACGTTAG TTCTTATAAA CAATAGGCTT
    GTCAATTTGG CAGAGATCGA TCCTCTTGCT TCTCTTCCAA AGCTGCATTT CCTTAGTCTT
    TTGGATAATA ACATCACCAA AAAGCCAAAT TATAGGCTCT ATGTGATTCA CAAACTAAAA
    TCACTCCGGG TTCTTGATTT TAAGAAAGTC AAAGGCAAGG AGAGAGCGGA AGCAGAACAT
    TTGTTTGCAT CCAAAGAGGT TGAAGAAGAG GCTAGAAGGG AATCTGTCAA GACATTCACT
    CCAGGTGAGG TTCCAAATGT TTTAGAAGGT GCCGAGGAAC AACAGGCTCC TAAAGTGGTT
    GCCCCCACAC CAGATCAGAT TATAGCAATC AAGGCTGCCA TTGTCAATTC CCAGACTCTT
    GAAGAAGTTG CAAGACTTGA GAAGGCATTG AACTCAGGTC AACTTCCTGC AGATCTTAAA
    ATTTTGGATG GTACTGGGTC AAATAGTGTC AAAGAACAAG ATGACAAAAT GGCTACTGAT
    AATCAAAATG AGGCCGAACC AAACAATTTG GAGGAACAGA AGGATAATGA AGCCACGCCT
    ATGGAACAGG AATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002299368.1
    CDS84..938
    Translation

    Target ORF information:

    RefSeq Version XM_002299332.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa U2 small nuclear ribonucleoprotein A' (POPTR_0001s12570g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002299332.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGTGAGAC TGACAGCCGA CTTGGTTTGG AAAAGCCCTC ATTTCTTCAA TGCCATCAAG 
    GAGCGCGAAT TAGATCTTCG AGGTAACAAG ATTCCTGTAA TCGAAAACCT GGGTGCTACT
    GAGGACCAAT TTGATACCAT CGATTTGTCT GACAACGAGA TTGTCAAGCT TGAAAACATG
    CCCTATCTTA ATCGGCTGGG CACTTTGATA ATCAACAACA ACAGAATTAC CCGTATCAAT
    CCTAACATTG GAGAGTACTT GCCAAAACTT CACACGTTAG TTCTTATAAA CAATAGGCTT
    GTCAATTTGG CAGAGATCGA TCCTCTTGCT TCTCTTCCAA AGCTGCATTT CCTTAGTCTT
    TTGGATAATA ACATCACCAA AAAGCCAAAT TATAGGCTCT ATGTGATTCA CAAACTAAAA
    TCACTCCGGG TTCTTGATTT TAAGAAAGTC AAAGGCAAGG AGAGAGCGGA AGCAGAACAT
    TTGTTTGCAT CCAAAGAGGT TGAAGAAGAG GCTAGAAGGG AATCTGTCAA GACATTCACT
    CCAGGTGAGG TTCCAAATGT TTTAGAAGGT GCCGAGGAAC AACAGGCTCC TAAAGTGGTT
    GCCCCCACAC CAGATCAGAT TATAGCAATC AAGGCTGCCA TTGTCAATTC CCAGACTCTT
    GAAGAAGTTG CAAGACTTGA GAAGGCATTG AACTCAGGTC AACTTCCTGC AGATCTTAAA
    ATTTTGGATG GTACTGGGTC AAATAGTGTC AAAGAACAAG ATGACAAAAT GGCTACTGAT
    AATCAAAATG AGGCCGAACC AAACAATTTG GAGGAACAGA AGGATAATGA AGCCACGCCT
    ATGGAACAGG AATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa421525
    Clone ID Related Accession (Same CDS sequence) XM_002299332.3
    Accession Version XM_002299332.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 855bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product U2 small nuclear ribonucleoprotein A'
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002299332.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGTGAGAC TGACAGCCGA CTTGGTTTGG AAAAGCCCTC ATTTCTTCAA TGCCATCAAG 
    GAGCGCGAAT TAGATCTTCG AGGTAACAAG ATTCCTGTAA TCGAAAACCT GGGTGCTACT
    GAGGACCAAT TTGATACCAT CGATTTGTCT GACAACGAGA TTGTCAAGCT TGAAAACATG
    CCCTATCTTA ATCGGCTGGG CACTTTGATA ATCAACAACA ACAGAATTAC CCGTATCAAT
    CCTAACATTG GAGAGTACTT GCCAAAACTT CACACGTTAG TTCTCATAAA CAATAGGCTT
    GTCAATTTGG CAGAGATCGA TCCTCTTGCT TCTCTTCCAA AGCTGCATTT CCTTAGTCTT
    TTGGATAATA ACATCACCAA AAAGCCAAAT TATAGGCTCT ATGTGATTCA CAAACTAAAA
    TCACTCCGGG TTCTTGATTT TAAGAAAGTC AAAGGCAAGG AGAGAGCGGA AGCAGAACAT
    TTGTTTGCAT CCAAAGAGGT TGAAGAAGAG GCTAGAAGGG AATCTGTCAA GACATTCACT
    CCAGGTGAGG TTCCAAATGT TTTAGAAGGT GCCGAGGAAC AACAGGCTCC TAAAGTGGTT
    GCCCCCACAC CAGATCAGAT TATAGCAATC AAGGCTGCCA TTGTCAATTC CCAGACTCTT
    GAAGAAGTTG CAAGACTTGA GAAGGCATTG AACTCAGGTC AACTTCCTGC AGATCTTAAA
    ATTTTGGATG GTACTGGGTC AAATAGTGTC AAAGAACAAG ATGACAAAAT GGCTACTGAT
    AATCAAAATG AGGCCGAACC AAACAATTTG GAGGAACAGA AGGATAATGA AGCCACGCCT
    ATGGAACAGG AATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002299368.1
    CDS121..975
    Translation

    Target ORF information:

    RefSeq Version XM_002299332.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa U2 small nuclear ribonucleoprotein A' (LOC7477768), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002299332.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGTGAGAC TGACAGCCGA CTTGGTTTGG AAAAGCCCTC ATTTCTTCAA TGCCATCAAG 
    GAGCGCGAAT TAGATCTTCG AGGTAACAAG ATTCCTGTAA TCGAAAACCT GGGTGCTACT
    GAGGACCAAT TTGATACCAT CGATTTGTCT GACAACGAGA TTGTCAAGCT TGAAAACATG
    CCCTATCTTA ATCGGCTGGG CACTTTGATA ATCAACAACA ACAGAATTAC CCGTATCAAT
    CCTAACATTG GAGAGTACTT GCCAAAACTT CACACGTTAG TTCTCATAAA CAATAGGCTT
    GTCAATTTGG CAGAGATCGA TCCTCTTGCT TCTCTTCCAA AGCTGCATTT CCTTAGTCTT
    TTGGATAATA ACATCACCAA AAAGCCAAAT TATAGGCTCT ATGTGATTCA CAAACTAAAA
    TCACTCCGGG TTCTTGATTT TAAGAAAGTC AAAGGCAAGG AGAGAGCGGA AGCAGAACAT
    TTGTTTGCAT CCAAAGAGGT TGAAGAAGAG GCTAGAAGGG AATCTGTCAA GACATTCACT
    CCAGGTGAGG TTCCAAATGT TTTAGAAGGT GCCGAGGAAC AACAGGCTCC TAAAGTGGTT
    GCCCCCACAC CAGATCAGAT TATAGCAATC AAGGCTGCCA TTGTCAATTC CCAGACTCTT
    GAAGAAGTTG CAAGACTTGA GAAGGCATTG AACTCAGGTC AACTTCCTGC AGATCTTAAA
    ATTTTGGATG GTACTGGGTC AAATAGTGTC AAAGAACAAG ATGACAAAAT GGCTACTGAT
    AATCAAAATG AGGCCGAACC AAACAATTTG GAGGAACAGA AGGATAATGA AGCCACGCCT
    ATGGAACAGG AATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D