ORF » Species Summary » Populus trichocarpa » POPTR_0017s09590g cDNA ORF clone

POPTR_0017s09590g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0017s09590g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0017s09590g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa34945 XM_006373138.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0017s09590g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
OPa446800 XM_006373138.2
Latest version!		 Populus trichocarpa probable protein S-acyltransferase 7 (LOC18107204), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0017s09590g ( XM_006373138.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006373200.1 Populus trichocarpa hypothetical protein (POPTR_0017s09590g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa34945
    Clone ID Related Accession (Same CDS sequence) XM_006373138.1
    Accession Version XM_006373138.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 894bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008483). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGACTGTGA AAGTCAAGTA TTGTGATACT TGCATGCTTT ACAGACCACC TCGCTGCTCG 
    CATTGTTCAA TATGCAATAA CTGTGTAGAA AGATTTGACC ATCACTGCCC TTGGGTTGGG 
    CAGTGTATTG GCTTGAGAAA TTATCGATTC TTCTTCATGT TTGTCTTCTC AACGACCCTT 
    CTCTGTATAT ATGTTTTTTC ATTCTGCTGG GTCTACATTA GGAAGATCAT GGGATCAGAG 
    AACTCATTAA TTTGGAAAGC AATGATCAAA ACCCCTGCCT CGATTGTTTT AATAGTTTAT 
    ACTTTCATAT CAATGTGGTT TGTCGGTGGC CTTACTGCCT TCCATTTGTA TCTCATCTGC 
    ACAAATCAGA CTACTTATGA GAATTTCAGA TATCGCTATG ACAGGCACGC AAATCCCTTT 
    TATAAAGGAG TGGTAGAGAA CTTGAAGGAA ATATTTTGCT CCAGTATCCC CCCATCCAAG 
    AACAATTTCA GGGCAAAGGT GCCCGGGGAA CCTGCACTAC CAGCTCGAAC ACTTGGTAGG 
    GGCTTCATGA GTCCAAATAT GGGTAAAGCT GTAGGTGACA TGGAAATGGG TAGGAAAACA 
    GTATGGGGAG ACATGAATGC TATGACTGAT GGCGAAGGAC AACTTGCTGA CAACGATCGG 
    CTGAACATAA AAGATGGTGA ACTAGATGAA TTATCCCTGG ATATCAGGAC CACAGTAGAT 
    GAAGTTGGAG ACCGTGGTGG AATACATCCT AGGCGATCGA GTTGGGGAAG AAAGAGTGGA 
    AGCTGGGAGA TGTCACCTGA AGTTCTTGCC TTGGCAGCTA GAGTGGGGGA ATCCAACCGT 
    ATGGGTGGTG GGAGCAGCAG TGGCAGCTTG ACAACTGAGA ACCAACAATC ATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006373200.1
    CDS163..1056
    Translation

    Target ORF information:

    RefSeq Version XM_006373138.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0017s09590g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006373138.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGACTGTGA AAGTCAAGTA TTGTGATACT TGCATGCTTT ACAGACCACC TCGCTGCTCG 
    CATTGTTCAA TATGCAATAA CTGTGTAGAA AGATTTGACC ATCACTGCCC TTGGGTTGGG 
    CAGTGTATTG GCTTGAGAAA TTATCGATTC TTCTTCATGT TTGTCTTCTC AACGACCCTT 
    CTCTGTATAT ATGTTTTTTC ATTCTGCTGG GTCTACATTA GGAAGATCAT GGGATCAGAG 
    AACTCATTAA TTTGGAAAGC AATGATCAAA ACCCCTGCCT CGATTGTTTT AATAGTTTAT 
    ACTTTCATAT CAATGTGGTT TGTCGGTGGC CTTACTGCCT TCCATTTGTA TCTCATCTGC 
    ACAAATCAGA CTACTTATGA GAATTTCAGA TATCGCTATG ACAGGCACGC AAATCCCTTT 
    TATAAAGGAG TGGTAGAGAA CTTGAAGGAA ATATTTTGCT CCAGTATCCC CCCATCCAAG 
    AACAATTTCA GGGCAAAGGT GCCCGGGGAA CCTGCACTAC CAGCTCGAAC ACTTGGTAGG 
    GGCTTCATGA GTCCAAATAT GGGTAAAGCT GTAGGTGACA TGGAAATGGG TAGGAAAACA 
    GTATGGGGAG ACATGAATGC TATGACTGAT GGCGAAGGAC AACTTGCTGA CAACGATCGG 
    CTGAACATAA AAGATGGTGA ACTAGATGAA TTATCCCTGG ATATCAGGAC CACAGTAGAT 
    GAAGTTGGAG ACCGTGGTGG AATACATCCT AGGCGATCGA GTTGGGGAAG AAAGAGTGGA 
    AGCTGGGAGA TGTCACCTGA AGTTCTTGCC TTGGCAGCTA GAGTGGGGGA ATCCAACCGT 
    ATGGGTGGTG GGAGCAGCAG TGGCAGCTTG ACAACTGAGA ACCAACAATC ATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0017s09590g ( XM_006373138.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006373200.2 Populus trichocarpa probable protein S-acyltransferase 7 (LOC18107204), mRNA.
    Price & Availability↑
    CloneID OPa446800
    Clone ID Related Accession (Same CDS sequence) XM_006373138.2
    Accession Version XM_006373138.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1323bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product probable protein S-acyltransferase 7
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037301.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006373138.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGTATGTGG TGCCACCACC AAAGGGATCA TCGGATACTG GATCCAGTGA TTTACGGGTT 
    TATCAAACTT GGAAAGGCAG TAACATATTT TTTCTTCAAG GGAGGTTTAT TTTTGGACCA 
    GATGTGAGAT CGCTTGCATT GACTACACTC CTGATAGTTG TTCCAGTTGC AGTGTTCTGT 
    ATCTTTGTTG CCAGAAAGCT GATGGATGAT TTTTCAGATG ATTGGGGAAT ATCAATAATG 
    GTCATTGCTG TTGTGTTCAC TATTTATGAT TTAGTTCTTC TCCTGCTAAC ATCTGGAAGG 
    GATCCTGGCA TAATTCCACG CAATGCATAT CCACCAGAAC CGGATGGCTT TTATGGGAGT 
    GCAGATGTTG GGTCCGGTCA AACTCCACAA TTACGCCTGC CACGCATTAA GGAGGTGGAA 
    TTCAATGGAA TGACTGTGAA AGTCAAGTAT TGTGATACTT GCATGCTTTA CAGACCACCT 
    CGCTGCTCGC ATTGTTCAAT ATGCAATAAC TGTGTAGAAA GATTTGACCA TCACTGCCCT 
    TGGGTTGGGC AGTGTATTGG CTTGAGAAAT TATCGATTCT TCTTCATGTT TGTCTTCTCA 
    ACGACCCTTC TCTGTATATA TGTTTTTTCA TTCTGCTGGG TCTACATTAG GAAGATCATG 
    GGATCAGAGA ACTCATTAAT TTGGAAAGCA ATGATCAAAA CCCCTGCCTC GATTGTTTTA 
    ATAGTTTATA CTTTCATATC AATGTGGTTT GTCGGTGGCC TTACTGCCTT CCATTTGTAT 
    CTCATCTGCA CAAATCAGAC TACTTATGAG AATTTCAGAT ATCGCTATGA CAGGCACGCA 
    AATCCCTTTT ATAAAGGAGT GGTAGAGAAC TTGAAGGAAA TATTTTGCTC CAGTATCCCC 
    CCATCCAAGA ACAATTTCAG GGCAAAGGTG CCCGGGGAAC CTGCACTACC AGCTCGAACA 
    CTTGGTAGGG GCTTCATGAG TCCAAATATG GGTAAAGCTG TAGGTGACAT GGAAATGGGT 
    AGGAAAACAG TATGGGGAGA CATGAATGCT ATGACTGATG GCGAAGGACA ACTTGCTGAC 
    AACGATCGGC TGAACATAAA AGATGGTGAA CTAGATGAAT TATCCCTGGA TATCAGGACC 
    ACAGTAGATG AAGTTGGAGA CCGTGGTGGA ATACATCCTA GGCGATCGAG TTGGGGAAGA 
    AAGAGTGGAA GCTGGGAGAT GTCACCTGAA GTTCTTGCCT TGGCAGCTAG AGTGGGGGAA 
    TCCAACCGTA TGGGTGGTGG GAGCAGCAGT GGCAGCTTGA CAACTGAGAA CCAACAATCA 
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006373200.2
    CDS287..1609
    Translation

    Target ORF information:

    RefSeq Version XM_006373138.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa probable protein S-acyltransferase 7 (LOC18107204), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006373138.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGTATGTGG TGCCACCACC AAAGGGATCA TCGGATACTG GATCCAGTGA TTTACGGGTT 
    TATCAAACTT GGAAAGGCAG TAACATATTT TTTCTTCAAG GGAGGTTTAT TTTTGGACCA 
    GATGTGAGAT CGCTTGCATT GACTACACTC CTGATAGTTG TTCCAGTTGC AGTGTTCTGT 
    ATCTTTGTTG CCAGAAAGCT GATGGATGAT TTTTCAGATG ATTGGGGAAT ATCAATAATG 
    GTCATTGCTG TTGTGTTCAC TATTTATGAT TTAGTTCTTC TCCTGCTAAC ATCTGGAAGG 
    GATCCTGGCA TAATTCCACG CAATGCATAT CCACCAGAAC CGGATGGCTT TTATGGGAGT 
    GCAGATGTTG GGTCCGGTCA AACTCCACAA TTACGCCTGC CACGCATTAA GGAGGTGGAA 
    TTCAATGGAA TGACTGTGAA AGTCAAGTAT TGTGATACTT GCATGCTTTA CAGACCACCT 
    CGCTGCTCGC ATTGTTCAAT ATGCAATAAC TGTGTAGAAA GATTTGACCA TCACTGCCCT 
    TGGGTTGGGC AGTGTATTGG CTTGAGAAAT TATCGATTCT TCTTCATGTT TGTCTTCTCA 
    ACGACCCTTC TCTGTATATA TGTTTTTTCA TTCTGCTGGG TCTACATTAG GAAGATCATG 
    GGATCAGAGA ACTCATTAAT TTGGAAAGCA ATGATCAAAA CCCCTGCCTC GATTGTTTTA 
    ATAGTTTATA CTTTCATATC AATGTGGTTT GTCGGTGGCC TTACTGCCTT CCATTTGTAT 
    CTCATCTGCA CAAATCAGAC TACTTATGAG AATTTCAGAT ATCGCTATGA CAGGCACGCA 
    AATCCCTTTT ATAAAGGAGT GGTAGAGAAC TTGAAGGAAA TATTTTGCTC CAGTATCCCC 
    CCATCCAAGA ACAATTTCAG GGCAAAGGTG CCCGGGGAAC CTGCACTACC AGCTCGAACA 
    CTTGGTAGGG GCTTCATGAG TCCAAATATG GGTAAAGCTG TAGGTGACAT GGAAATGGGT 
    AGGAAAACAG TATGGGGAGA CATGAATGCT ATGACTGATG GCGAAGGACA ACTTGCTGAC 
    AACGATCGGC TGAACATAAA AGATGGTGAA CTAGATGAAT TATCCCTGGA TATCAGGACC 
    ACAGTAGATG AAGTTGGAGA CCGTGGTGGA ATACATCCTA GGCGATCGAG TTGGGGAAGA 
    AAGAGTGGAA GCTGGGAGAT GTCACCTGAA GTTCTTGCCT TGGCAGCTAG AGTGGGGGAA 
    TCCAACCGTA TGGGTGGTGG GAGCAGCAGT GGCAGCTTGA CAACTGAGAA CCAACAATCA 
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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