| Gene Symbol | IRF1 |
| Entrez Gene ID | 102447273 |
| Full Name | interferon regulatory factor 1 |
| Gene Type | protein-coding |
| Organism | Pelodiscus sinensis(Chinese soft-shelled turtle) |
ORF » Species Summary » Pelodiscus sinensis » IRF1 cDNA ORF clone
| Gene Symbol | IRF1 |
| Entrez Gene ID | 102447273 |
| Full Name | interferon regulatory factor 1 |
| Gene Type | protein-coding |
| Organism | Pelodiscus sinensis(Chinese soft-shelled turtle) |
| mRNA | Protein | Name |
|---|---|---|
| XM_006128514.3 | XP_006128576.1 | interferon regulatory factor 1 isoform X1 |
| NM_001317050.1 | NP_001303979.1 | interferon regulatory factor 1 |
| XM_006128514.2 | XP_006128576.1 | interferon regulatory factor 1 |
IFN-? in turtle: conservation in sequence and signalling and role in inhibiting iridovirus replication in Chinese soft-shelled turtle Pelodiscus sinensis.
Fu JP, Chen SN, Zou PF, Huang B, Guo Z, Zeng LB, Qin QW, Nie P
Developmental and comparative immunology43(1)87-95(2014 Mar)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following IRF1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the IRF1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OPe53163 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001317050.1 | |
| Accession Version | NM_001317050.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 951bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-11-25 | |
| Organism | Pelodiscus sinensis(Chinese soft-shelled turtle) | |
| Product | interferon regulatory factor 1 | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from KF623110.1. ##Evidence-Data-START## Transcript exon combination :: KF623110.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00004095, SAMD00004097 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGCCAGTAA CAAGACTGCG CATGAGGCCA TGGCTGGAGA TGCAGATTGA TTCCAATAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001303979.1 |
| CDS | 1..951 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001317050.1 |
1 | ATGCCAGTAA CAAGACTGCG CATGAGGCCA TGGCTGGAGA TGCAGATTGA TTCCAATAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OPe34331 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006128514.3 , XM_006128514.2 | |
| Accession Version | XM_006128514.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 951bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-06-03 | |
| Organism | Pelodiscus sinensis(Chinese soft-shelled turtle) | |
| Product | interferon regulatory factor 1 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005856644.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Jun 4, 2018 this sequence version replaced XM_006128514.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pelodiscus sinensis Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCCAGTAA CAAGACTGCG CATGAGGCCA TGGCTGGAGA TGCAGATTGA TTCCAATAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_006128576.1 |
| CDS | 284..1234 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_006128514.3 |
1 | ATGCCAGTAA CAAGACTGCG CATGAGGCCA TGGCTGGAGA TGCAGATTGA TTCCAATAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OPe34331 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006128514.3 , XM_006128514.2 | |
| Accession Version | XM_006128514.2 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 951bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2015-11-02 | |
| Organism | Pelodiscus sinensis(Chinese soft-shelled turtle) | |
| Product | interferon regulatory factor 1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005856644.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Nov 3, 2015 this sequence version replaced XM_006128514.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pelodiscus sinensis Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCCAGTAA CAAGACTGCG CATGAGGCCA TGGCTGGAGA TGCAGATTGA TTCCAATAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_006128576.1 |
| CDS | 159..1109 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_006128514.2 |
1 | ATGCCAGTAA CAAGACTGCG CATGAGGCCA TGGCTGGAGA TGCAGATTGA TTCCAATAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
IFN-? in turtle: conservation in sequence and signalling and role in inhibiting iridovirus replication in Chinese soft-shelled turtle Pelodiscus sinensis. |