LOC105278900 cDNA ORF clone, Ooceraea biroi(clonal raider ant)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC105278900
Entrez Gene ID	105278900
Full Name	matrix metalloproteinase-2
Gene Type	protein-coding
Organism	Ooceraea biroi(clonal raider ant)

mRNA and Protein(s)

mRNA	Protein	Name
XM_011338342.2	XP_011336644.2	matrix metalloproteinase-2
XM_011338342.1	XP_011336644.1	matrix metalloproteinase-2

Pathways from BioSystems
Gene Ontology

The following LOC105278900 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC105278900 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OOo08224	XM_011338342.1 Latest version!	Cerapachys biroi matrix metalloproteinase-2 (LOC105278900), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OOo24022	XM_011338342.2 Latest version!	Ooceraea biroi matrix metalloproteinase-2 (LOC105278900), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC105278900 ( XM_011338342.1 ) cDNA ORF clone, Ooceraea biroi(clonal raider ant) -> XP_011336644.1 Cerapachys biroi matrix metalloproteinase-2 (LOC105278900), mRNA.

Price & Availability↑

CloneID	OOo08224
Clone ID Related Accession (Same CDS sequence)	XM_011338342.1
Accession Version	XM_011338342.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1113bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-01-23
Organism	Ooceraea biroi(clonal raider ant)
Product	matrix metalloproteinase-2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_011925056.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Cerapachys biroi Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 100% of CDS bases ##RefSeq-Attributes-END##

ATGCTGGACC GTAGGTACGG CGGCGCCGTT TGTCCCGATG ACCTCGATGG GCCGGGCAAG 
GTGCTCGCTC ACGCGACGTT ACCCACAGGG ACCCGGGACG ACGTGTCAGA GGTTTACATA 
GACCACCGCG AGGCGTGGCA CATCGCACTA ACCCCCAATC CGCAGAATTC GCATCATCTA 
CTGCGAATGC TCGTTCACGA GATCGGCCAC TCGTTGGGAC TGTCGCACAC CACGGACGAG 
AACTTGCTCA TGTACGCGTA CTCACCTGCC GTGGAATGGC CGGTGGCGCT CGGTATGGAG 
GACGTTCTCG CCGTGCGGAA TCTCTACGGT GGCGCGGAGG GCGAGCCGTT GACCGTGGTG 
CCTGCCGAGC GTACGGTTGT ACAAAAGACT ACGACGCCGG CGACTACTAC TACATCGTCG 
CCTACGACGA CGACCGCGCC GCCGGAGCCG CCCGATCCGT GCACCTGGCG CCACATCGAC 
ACCCTGCTCG TGCTGGGAAA GCGCTTATTC ATCACGCGGG GACGGTACAC GTGGTCGATC 
GGCCTGAGCG GGAAGATCGT CAACAGACAA TTCGTCCTGG GGAATTACGT GAGGTTCTTG 
CCAAAGAATC TCACGCGCCT GTCGGCGGCG TATCAGACGG TCAAGGGGGA CCTGGTGCTG 
TTCGCCGATG GATGGGTGTA CATGGTATCT TATCCAACCC TCGAGTTACG CGCGTCGTGG 
CCGCGACGTA TCACGGATCT TGGGCTTTCG CCCACCGCGG TGATCAACGC CGTGCTGAAC 
ACGCACACAG GTCGCACCTA CGTCATATAC AACGATTACG CGGTACTAGA AATGGACGAT 
TGCAACATGA CGGCTCGTGG GTACCATACG CTGCAGACGG TTTTCCCGGG TATACCGTCG 
TTGGTACGCA CGGCCTACCG CTACACCGAT GGACAACTCT ACTTCGTTCA TCGGGATTGC 
TTCTTCGCGT ACAACGAGTT CACCGAAACC GTGACGAAGT CTGGGGAGTT CGATCTCGAC 
GTGATTGGCG TGACGTGTCC GAGGGAGGAT ATCCTATGTA AATTGTGGGA TCTGCTCGCT 
CGGCTCGCTC GTTCCAACAT CGCGTTTGAT TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_011336644.1
CDS	1..1113
Translation	MLDRRYGGAVCPDDLDGPGKVLAHATLPTGTRDDVSEVYIDHREAWHIALTPNPQNSHHLLRMLVHEIGHSLGLSHTTDENLLMYAYSPAVEWPVALGMEDVLAVRNLYGGAEGEPLTVVPAERTVVQKTTTPATTTTSSPTTTTAPPEPPDPCTWRHIDTLLVLGKRLFITRGRYTWSIGLSGKIVNRQFVLGNYVRFLPKNLTRLSAAYQTVKGDLVLFADGWVYMVSYPTLELRASWPRRITDLGLSPTAVINAVLNTHTGRTYVIYNDYAVLEMDDCNMTARGYHTLQTVFPGIPSLVRTAYRYTDGQLYFVHRDCFFAYNEFTETVTKSGEFDLDVIGVTCPREDILCKLWDLLARLARSNIAFD

Target ORF information:

RefSeq Version	XM_011338342.1
Organism	Ooceraea biroi(clonal raider ant)
Definition	Cerapachys biroi matrix metalloproteinase-2 (LOC105278900), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_011338342.1

ORF Insert Sequence:

ATGCTGGACC GTAGGTACGG CGGCGCCGTT TGTCCCGATG ACCTCGATGG GCCGGGCAAG 
GTGCTCGCTC ACGCGACGTT ACCCACAGGG ACCCGGGACG ACGTGTCAGA GGTTTACATA 
GACCACCGCG AGGCGTGGCA CATCGCACTA ACCCCCAATC CGCAGAATTC GCATCATCTA 
CTGCGAATGC TCGTTCACGA GATCGGCCAC TCGTTGGGAC TGTCGCACAC CACGGACGAG 
AACTTGCTCA TGTACGCGTA CTCACCTGCC GTGGAATGGC CGGTGGCGCT CGGTATGGAG 
GACGTTCTCG CCGTGCGGAA TCTCTACGGT GGCGCGGAGG GCGAGCCGTT GACCGTGGTG 
CCTGCCGAGC GTACGGTTGT ACAAAAGACT ACGACGCCGG CGACTACTAC TACATCGTCG 
CCTACGACGA CGACCGCGCC GCCGGAGCCG CCCGATCCGT GCACCTGGCG CCACATCGAC 
ACCCTGCTCG TGCTGGGAAA GCGCTTATTC ATCACGCGGG GACGGTACAC GTGGTCGATC 
GGCCTGAGCG GGAAGATCGT CAACAGACAA TTCGTCCTGG GGAATTACGT GAGGTTCTTG 
CCAAAGAATC TCACGCGCCT GTCGGCGGCG TATCAGACGG TCAAGGGGGA CCTGGTGCTG 
TTCGCCGATG GATGGGTGTA CATGGTATCT TATCCAACCC TCGAGTTACG CGCGTCGTGG 
CCGCGACGTA TCACGGATCT TGGGCTTTCG CCCACCGCGG TGATCAACGC CGTGCTGAAC 
ACGCACACAG GTCGCACCTA CGTCATATAC AACGATTACG CGGTACTAGA AATGGACGAT 
TGCAACATGA CGGCTCGTGG GTACCATACG CTGCAGACGG TTTTCCCGGG TATACCGTCG 
TTGGTACGCA CGGCCTACCG CTACACCGAT GGACAACTCT ACTTCGTTCA TCGGGATTGC 
TTCTTCGCGT ACAACGAGTT CACCGAAACC GTGACGAAGT CTGGGGAGTT CGATCTCGAC 
GTGATTGGCG TGACGTGTCC GAGGGAGGAT ATCCTATGTA AATTGTGGGA TCTGCTCGCT 
CGGCTCGCTC GTTCCAACAT CGCGTTTGAT TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC105278900 ( XM_011338342.2 ) cDNA ORF clone, Ooceraea biroi(clonal raider ant) -> XP_011336644.2 Ooceraea biroi matrix metalloproteinase-2 (LOC105278900), mRNA.

Price & Availability↑

CloneID	OOo24022
Clone ID Related Accession (Same CDS sequence)	XM_011338342.2
Accession Version	XM_011338342.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1356bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-06
Organism	Ooceraea biroi(clonal raider ant)
Product	matrix metalloproteinase-2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_039508.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Nov 7, 2018 this sequence version replaced XM_011338342.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Ooceraea biroi Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 100% of CDS bases ##RefSeq-Attributes-END##

ATGCTTCGTT ATATGTCCAG ACCACGCTGC GGGGTGACCG ACGCGCCAAG TCGCCGGCTC 
GGTGTCGCGC CGTTACGGTG GCCGAAGCTG AATCTCACGT GGAACTTCCA ACTGGCAGAC 
CGGACTACCC AGCGAACAGC GGAGACCGCA TTCGCTATCT GGGCCGCGAA CTCGTCGTTG 
ACGTTCTCGC GCGACACGAG CGAGCCGGAC ATCATCATAG CGTTCCGCGA GGGTAGGCAC 
ATGATGCTGG ACCGTAGGTA CGGCGGCGCC GTTTGTCCCG ATGACCTCGA TGGGCCGGGC 
AAGGTGCTCG CTCACGCGAC GTTACCCACA GGGACCCGGG ACGACGTGTC AGAGGTTTAC 
ATAGACCACC GCGAGGCGTG GCACATCGCA CTAACCCCCA ATCCGCAGAA TTCGCATCAT 
CTACTGCGAA TGCTCGTTCA CGAGATCGGC CACTCGTTGG GACTGTCGCA CACCACGGAC 
GAGAACTTGC TCATGTACGC GTACTCACCT GCCGTGGAAT GGCCGGTGGC GCTCGGTATG 
GAGGACGTTC TCGCCGTGCG GAATCTCTAC GGTGGCGCGG AGGGCGAGCC GTTGACCGTG 
GTGCCTGCCG AGCGTACGGT TGTACAAAAG ACTACGACGC CGGCGACTAC TACTACATCG 
TCGCCTACGA CGACGACCGC GCCGCCGGAG CCGCCCGATC CGTGCACCTG GCGCCACATC 
GACACCCTGC TCGTGCTGGG AAAGCGCTTA TTCATCACGC GGGGACGGTA CACGTGGTCG 
ATCGGCCTGA GCGGGAAGAT CGTCAACAGA CAATTCGTCC TGGGGAATTA CGTGAGGTTC 
TTGCCAAAGA ATCTCACGCG CCTGTCGGCG GCGTATCAGA CGGTCAAGGG GGACCTGGTG 
CTGTTCGCCG ATGGATGGGT GTACATGGTA TCTTATCCAA CCCTCGAGTT ACGCGCGTCG 
TGGCCGCGAC GTATCACGGA TCTTGGGCTT TCGCCCACCG CGGTGATCAA CGCCGTGCTG 
AACACGCACA CAGGTCGCAC CTACGTCATA TACAACGATT ACGCGGTACT AGAAATGGAC 
GATTGCAACA TGACGGCTCG TGGGTACCAT ACGCTGCAGA CGGTTTTCCC GGGTATACCG 
TCGTTGGTAC GCACGGCCTA CCGCTACACC GATGGACAAC TCTACTTCGT TCATCGGGAT 
TGCTTCTTCG CGTACAACGA GTTCACCGAA ACCGTGACGA AGTCTGGGGA GTTCGATCTC 
GACGTGATTG GCGTGACGTG TCCGAGGGAG GATATCCTAT GTAAATTGTG GGATCTGCTC 
GCTCGGCTCG CTCGTTCCAA CATCGCGTTT GATTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_011336644.2
CDS	1..1356
Translation	MLRYMSRPRCGVTDAPSRRLGVAPLRWPKLNLTWNFQLADRTTQRTAETAFAIWAANSSLTFSRDTSEPDIIIAFREGRHMMLDRRYGGAVCPDDLDGPGKVLAHATLPTGTRDDVSEVYIDHREAWHIALTPNPQNSHHLLRMLVHEIGHSLGLSHTTDENLLMYAYSPAVEWPVALGMEDVLAVRNLYGGAEGEPLTVVPAERTVVQKTTTPATTTTSSPTTTTAPPEPPDPCTWRHIDTLLVLGKRLFITRGRYTWSIGLSGKIVNRQFVLGNYVRFLPKNLTRLSAAYQTVKGDLVLFADGWVYMVSYPTLELRASWPRRITDLGLSPTAVINAVLNTHTGRTYVIYNDYAVLEMDDCNMTARGYHTLQTVFPGIPSLVRTAYRYTDGQLYFVHRDCFFAYNEFTETVTKSGEFDLDVIGVTCPREDILCKLWDLLARLARSNIAFD

Target ORF information:

RefSeq Version	XM_011338342.2
Organism	Ooceraea biroi(clonal raider ant)
Definition	Ooceraea biroi matrix metalloproteinase-2 (LOC105278900), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_011338342.2

ORF Insert Sequence:

ATGCTTCGTT ATATGTCCAG ACCACGCTGC GGGGTGACCG ACGCGCCAAG TCGCCGGCTC 
GGTGTCGCGC CGTTACGGTG GCCGAAGCTG AATCTCACGT GGAACTTCCA ACTGGCAGAC 
CGGACTACCC AGCGAACAGC GGAGACCGCA TTCGCTATCT GGGCCGCGAA CTCGTCGTTG 
ACGTTCTCGC GCGACACGAG CGAGCCGGAC ATCATCATAG CGTTCCGCGA GGGTAGGCAC 
ATGATGCTGG ACCGTAGGTA CGGCGGCGCC GTTTGTCCCG ATGACCTCGA TGGGCCGGGC 
AAGGTGCTCG CTCACGCGAC GTTACCCACA GGGACCCGGG ACGACGTGTC AGAGGTTTAC 
ATAGACCACC GCGAGGCGTG GCACATCGCA CTAACCCCCA ATCCGCAGAA TTCGCATCAT 
CTACTGCGAA TGCTCGTTCA CGAGATCGGC CACTCGTTGG GACTGTCGCA CACCACGGAC 
GAGAACTTGC TCATGTACGC GTACTCACCT GCCGTGGAAT GGCCGGTGGC GCTCGGTATG 
GAGGACGTTC TCGCCGTGCG GAATCTCTAC GGTGGCGCGG AGGGCGAGCC GTTGACCGTG 
GTGCCTGCCG AGCGTACGGT TGTACAAAAG ACTACGACGC CGGCGACTAC TACTACATCG 
TCGCCTACGA CGACGACCGC GCCGCCGGAG CCGCCCGATC CGTGCACCTG GCGCCACATC 
GACACCCTGC TCGTGCTGGG AAAGCGCTTA TTCATCACGC GGGGACGGTA CACGTGGTCG 
ATCGGCCTGA GCGGGAAGAT CGTCAACAGA CAATTCGTCC TGGGGAATTA CGTGAGGTTC 
TTGCCAAAGA ATCTCACGCG CCTGTCGGCG GCGTATCAGA CGGTCAAGGG GGACCTGGTG 
CTGTTCGCCG ATGGATGGGT GTACATGGTA TCTTATCCAA CCCTCGAGTT ACGCGCGTCG 
TGGCCGCGAC GTATCACGGA TCTTGGGCTT TCGCCCACCG CGGTGATCAA CGCCGTGCTG 
AACACGCACA CAGGTCGCAC CTACGTCATA TACAACGATT ACGCGGTACT AGAAATGGAC 
GATTGCAACA TGACGGCTCG TGGGTACCAT ACGCTGCAGA CGGTTTTCCC GGGTATACCG 
TCGTTGGTAC GCACGGCCTA CCGCTACACC GATGGACAAC TCTACTTCGT TCATCGGGAT 
TGCTTCTTCG CGTACAACGA GTTCACCGAA ACCGTGACGA AGTCTGGGGA GTTCGATCTC 
GACGTGATTG GCGTGACGTG TCCGAGGGAG GATATCCTAT GTAAATTGTG GGATCTGCTC 
GCTCGGCTCG CTCGTTCCAA CATCGCGTTT GATTAG