Scarf2 cDNA ORF clone, Mus musculus(house mouse)

Gene
Clones
gRNAs

Summary

Gene Symbol	Scarf2
Entrez Gene ID	224024
Full Name	scavenger receptor class F, member 2
Synonyms	NSR1,SREC-II,SRECRP-1,Scatf1,Srec2,SrecII
General protein information	Preferred Names scavenger receptor class F, member 2 Names scavenger receptor class F member 2 scavenger receptor expressed by endothelial cells 2 (acetyl LDL receptor like) scavenger receptor type F
Gene Type	protein-coding
Organism	Mus musculus(house mouse)
Genome	Chromosome: 16 Map Location: 16\|16 A3

mRNA and Protein(s)

mRNA	Protein	Name
XM_006522042.1	XP_006522105.1	scavenger receptor class F member 2 isoform X1
NM_153790.3	NP_722485.1	scavenger receptor class F member 2 precursor

Pathways from BioSystems

Homologies

	SCARF2	XP_001084100.2
Rattus norvegicus (Norway rat)	Scarf2	NP_001099334.1
Xenopus tropicalis (tropical clawed frog)	LOC100485666	XP_002932148.2
Pan troglodytes (chimpanzee)	SCARF2	XP_003317158.1
Bos taurus (cattle)	SCARF2	XP_005218360.1
Mus musculus (house mouse)	Scarf2	NP_722485.1
Gallus gallus (chicken)	SCARF2	XP_001235425.3
Homo sapiens (human)	SCARF2	NP_699165.2
Canis lupus familiaris (dog)	SCARF2	XP_005636716.1
Danio rerio (zebrafish)	LOC100329632	XP_003198649.2

Gene Ontology
Bibliography

Related articles in PubMed

Transcriptional targets of TWIST1 in the cranial mesoderm regulate cell-matrix interactions and mesenchyme maintenance.
Bildsoe H, Fan X, Wilkie EE, Ashoti A, Jones VJ, Power M, Qin J, Wang J, Tam PPL, Loebel DAF
Developmental biology418(1)189-203(2016 10)

High-throughput discovery of novel developmental phenotypes.
Dickinson ME, Flenniken AM, Ji X, Teboul L, Wong MD, White JK, Meehan TF, Weninger WJ, Westerberg H, Adissu H, Baker CN, Bower L, Brown JM, Caddle LB, Chiani F, Clary D, Cleak J, Daly MJ, Denegre JM, Doe B, Dolan ME, Edie SM, Fuchs H, Gailus-Durner V, Galli A, Gambadoro A, Gallegos J, Guo S, Horner NR, Hsu CW, Johnson SJ, Kalaga S, Keith LC, Lanoue L, Lawson TN, Lek M, Mark M, Marschall S, Mason J, McElwee ML, Newbigging S, Nutter LM, Peterson KA, Ramirez-Solis R, Rowland DJ, Ryder E, Samocha KE, Seavitt JR, Selloum M, Szoke-Kovacs Z, Tamura M, Trainor AG, Tudose I, Wakana S, Warren J, Wendling O, West DB, Wong L, Yoshiki A, , , , , , , , , MacArthur DG, Tocchini-Valentini GP, Gao X, Flicek P, Bradley A, Skarnes WC, Justice MJ, Parkinson HE, Moore M, Wells S, Braun RE, Svenson KL, de Angelis MH, Herault Y, Mohun T, Mallon AM, Henkelman RM, Brown SD, Adams DJ, Lloyd KC, McKerlie C, Beaudet AL, Bu?an M, Murray SA
Nature537(7621)508-514(2016 09)

A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain.
Thompson CL, Ng L, Menon V, Martinez S, Lee CK, Glattfelder K, Sunkin SM, Henry A, Lau C, Dang C, Garcia-Lopez R, Martinez-Ferre A, Pombero A, Rubenstein JLR, Wakeman WB, Hohmann J, Dee N, Sodt AJ, Young R, Smith K, Nguyen TN, Kidney J, Kuan L, Jeromin A, Kaykas A, Miller J, Page D, Orta G, Bernard A, Riley Z, Smith S, Wohnoutka P, Hawrylycz MJ, Puelles L, Jones AR
Neuron83(2)309-323(2014 Jul)

The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.
Koscielny G, Yaikhom G, Iyer V, Meehan TF, Morgan H, Atienza-Herrero J, Blake A, Chen CK, Easty R, Di Fenza A, Fiegel T, Grifiths M, Horne A, Karp NA, Kurbatova N, Mason JC, Matthews P, Oakley DJ, Qazi A, Regnart J, Retha A, Santos LA, Sneddon DJ, Warren J, Westerberg H, Wilson RJ, Melvin DG, Smedley D, Brown SD, Flicek P, Skarnes WC, Mallon AM, Parkinson H
Nucleic acids research42(Database issue)D802-9(2014 Jan)

SREC-I, a type F scavenger receptor, is an endocytic receptor for calreticulin.
Berwin B, Delneste Y, Lovingood RV, Post SR, Pizzo SV
The Journal of biological chemistry279(49)51250-7(2004 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

SREC-I is a type F scavenger receptor and an endocytic receptor for calreticulin
Title: SREC-I, a type F scavenger receptor, is an endocytic receptor for calreticulin.

role of scavenger receptor expressed by endothelial cells I (SREC-I) in the uptake of modified lipoproteins as well as in the development of atherosclerosis
Title: Scavenger receptor expressed by endothelial cells I (SREC-I) mediates the uptake of acetylated low density lipoproteins by macrophages stimulated with lipopolysaccharide.

binds to SRECI and has a similar tissue distribution pattern
Title: SREC-II, a new member of the scavenger receptor type F family, trans-interacts with SREC-I through its extracellular domain.

The following Scarf2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Scarf2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OMu83354	NM_153790.3 Latest version!	Mus musculus scavenger receptor class F, member 2 (Scarf2), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$475.30 $679.00
OMu52057	XM_006522042.1 Latest version!	Mus musculus scavenger receptor class F, member 2 (Scarf2), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$475.30 $679.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Scarf2 ( NM_153790.3 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_722485.1 Mus musculus scavenger receptor class F, member 2 (Scarf2), mRNA.

Price & Availability↑

CloneID	OMu83354
Clone ID Related Accession (Same CDS sequence)	NM_153790.3
Accession Version	NM_153790.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2502bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-02-24
Organism	Mus musculus(house mouse)
Product	scavenger receptor class F member 2 precursor
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AF522197.1, AC078895.34 and BC059226.1. On Nov 24, 2015 this sequence version replaced NM_153790.2. ##Evidence-Data-START## Transcript exon combination :: AF522197.1, AB024432.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END##

ATGGAGGGCG CAGGGTCCCG GGGGGCCGGG CCGGCGCGGC GCCAGGGAGC CCGAGGGCTG 
GGACTGCTGC TGCTGCTCTG GCTGCTGCCC GGTCTCGCGG CGCCCCAGGA CTTGAACCCG 
CGAGGCCGCA ACGTGTGCCG CACGCCCGGT TCCCAGGTGC TCACGTGTTG CGCTGGCTGG 
AGGCAGCTGG GGGATGAGTG TGGGATAGCG GTGTGCGAAG GCAATTCCAC GTGCTCAGAA 
AACGAGGTGT GCGTGCGGCC AGGCGAATGC CGCTGCCGAC ATGGCTACTT TGGTGCCAAC 
TGCGACACAA AGTGCCCGCG CCAGTTCTGG GGCCCTGACT GCAAGGAGAG GTGCAGTTGC 
CACCCGCACG GACAGTGCGA GGACGTGACC GGACAGTGTA CGTGTCACGC GCGCCGCTGG 
GGTGCGCGCT GCGAGCATGC TTGCCAATGC CAGCATGGCA CGTGCCACCC GCGGAGCGGC 
GCGTGCCGGT GCGAGCCGGG CTGGTGGGGT GCGCAATGCG CTAGCGCTTG CTATTGCAGC 
GCTACTTCCC GGTGCGATCC ACAGACAGGC GCCTGCCTGT GCCACGTAGG CTGGTGGGGC 
CGCAGCTGTA ACAACCAGTG CGCCTGCAAC TCGTCGCCCT GCGAGCAGCA GAGTGGCCGC 
TGCCAGTGTC GCGAGCGCAT GTTTGGCGCC CGCTGTGATC GCTATTGCCA GTGCTCTCAC 
GGTCGCTGCC ACCCGGTGGA CGGCACGTGT GCCTGCGATC CTGGCTACCG GGGCAAGTAT 
TGTCGCGAGC CATGCCCCGC TGGATTCTAT GGCCCGGGCT GTCGCCGTCG GTGTGGCCAA 
TGCAAAGGCC AGCAGCCGTG CACGGTAGTC GAAGGCCGCT GTCTGACATG CGAGCCCGGC 
TGGAACGGAA CCAAATGTGA CCAACCCTGC GCCACCGGTT TCTACGGCGA AGGTTGTGGC 
CACCGCTGCC CACCCTGCCG CGACGGGCAT GCCTGCAACC ATGTCACCGG CAAGTGTACG 
CACTGCAATG CGGGCTGGAT CGGCGACCGG TGCGAGACTA AGTGCAGTAA TGGCACTTAC 
GGTGAGGACT GTGCCTTCGT GTGCTCTGAT TGCGGCAGCG GCCACTGTGA CTTCCAGTCC 
GGGCGCTGCC TTTGCAGCCC TGGTGTTCAC GGACCTCACT GTAATGTAAC TTGCCCGGCC 
GGGCTCCACG GCGTGGACTG CGCCCAGGCC TGCAGCTGTC ACGAGGAATC ATGCGACCCG 
GTCACCGGTG CCTGCCACCT GGAGACCAAT CAGCGCAAAG GTGTGATGGG CGCGGGCGCT 
CTGCTCACGC TGCTCCTCGG CCTGCTGCTC TCGCTGCTCG GTTGTTGCTG CGCCTGCCGG 
GGCAAGGACT CGGCGCGCCG GGAGCTCACC CTTGGAAGGA AGAAGGCGCC TCAACGTTTT 
TGTGGAAGCT TCAGCCGCAT CAGCATGAAG CTGCCCCGAA TCCCGCTTCG CAGGCAGAAG 
CTGCCCAAAG TCGTAGTGGC CCATCATGAC CTAGACAACA CACTCAACTG CAGTTTTCTG 
GACCCACCCT CAGGGCTGGA GCAGCCCTCT CCATCATGGT CCTCCAGGGC CTCCTTCTCA 
TCATTCGACA CCACAGATGA AGGCCCTGTG TACTGTGTGC CCCACGAGGA AGCGACTGCC 
GACAGCCGAG ACCTGGAAGC GACTGCCGCT CTCACTGAGG TGGCCGCTGT GTCCTTAGAG 
CCCACGGGCA CCTCGACGCC CGGGGAGGAG GCAGCGGTCC TCCCTGCATC CTCAGACAGC 
GAGCGCTCCG CATCAAGCGT GGAGGGGCCG AGCGGGGCGC TGTACGCGCG TGTGGCCCGG 
CGCGAGGCCC GGCCGGCCCG GACCCGAAAT GAGGCTGGGG GCTTGTCACT GTCCCCATCG 
CCCGAGCGCA GGAAGCCGCC ACCACCAGAC CCTGCCACCA AGCCTAAGGT GTCCTGGATC 
CACGGCAAGC ACAGCGCCGC TGCCGCTGCA CCGTCGCCTC CGCCTGCAGG CCGCAAGGCT 
GCGCCGAGCC CTAGCGGGAG GAAACGGACC CCCAGCAACT CGTCGGTGCA GCCCCCCGGA 
CTGACCGAGG AGGCCCCCGG CCCGGCTTCA CCCACGCCAC CCCGCGCCCG AGCGCGCGGC 
CGCGGCCTGG GGCTCTCGGA GCCAACGGAC GCGGGAGGTC CCCCGCGCAG CGCGCCCGAG 
GCCGCCTCTA TGCTGGCAGC TGAGCTGCGC GACAAGACTC GCAGCTTAGG CCGCGCCGAG 
AAGCCGCCGC CGCCGCAGAA GGCCAAGCGC TCCGTGCTCC CCGCCGCGAC GGTCCGCACA 
GCCTCGGCGT CCGAGGCCTC GGGGTCAGAG AAGGCGGCGG CCAGCGCACC TGCGCCCGAG 
ACCCCTCGGA AGAAAACCCC CATCCAGAAA CCGCCTCGGA AGAAGAGCAG GGAGGCAGCG 
GGGGAGCCGA GTAGGGCGGG CACGGCCCCC GGAGCTTCCT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_722485.1
CDS	98..2599
Translation	MEGAGSRGAGPARRQGARGLGLLLLLWLLPGLAAPQDLNPRGRNVCRTPGSQVLTCCAGWRQLGDECGIAVCEGNSTCSENEVCVRPGECRCRHGYFGANCDTKCPRQFWGPDCKERCSCHPHGQCEDVTGQCTCHARRWGARCEHACQCQHGTCHPRSGACRCEPGWWGAQCASACYCSATSRCDPQTGACLCHVGWWGRSCNNQCACNSSPCEQQSGRCQCRERMFGARCDRYCQCSHGRCHPVDGTCACDPGYRGKYCREPCPAGFYGPGCRRRCGQCKGQQPCTVVEGRCLTCEPGWNGTKCDQPCATGFYGEGCGHRCPPCRDGHACNHVTGKCTHCNAGWIGDRCETKCSNGTYGEDCAFVCSDCGSGHCDFQSGRCLCSPGVHGPHCNVTCPAGLHGVDCAQACSCHEESCDPVTGACHLETNQRKGVMGAGALLTLLLGLLLSLLGCCCACRGKDSARRELTLGRKKAPQRFCGSFSRISMKLPRIPLRRQKLPKVVVAHHDLDNTLNCSFLDPPSGLEQPSPSWSSRASFSSFDTTDEGPVYCVPHEEATADSRDLEATAALTEVAAVSLEPTGTSTPGEEAAVLPASSDSERSASSVEGPSGALYARVARREARPARTRNEAGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAAPSPPPAGRKAAPSPSGRKRTPSNSSVQPPGLTEEAPGPASPTPPRARARGRGLGLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLGRAEKPPPPQKAKRSVLPAATVRTASASEASGSEKAAASAPAPETPRKKTPIQKPPRKKSREAAGEPSRAGTAPGAS

Target ORF information:

RefSeq Version	NM_153790.3
Organism	Mus musculus(house mouse)
Definition	Mus musculus scavenger receptor class F, member 2 (Scarf2), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_153790.3

ORF Insert Sequence:

ATGGAGGGCG CAGGGTCCCG GGGGGCCGGG CCGGCGCGGC GCCAGGGAGC CCGAGGGCTG 
GGACTGCTGC TGCTGCTCTG GCTGCTGCCC GGTCTCGCGG CGCCCCAGGA CTTGAACCCG 
CGAGGCCGCA ACGTGTGCCG CACGCCCGGT TCCCAGGTGC TCACGTGTTG CGCTGGCTGG 
AGGCAGCTGG GGGATGAGTG TGGGATAGCG GTGTGCGAAG GCAATTCCAC GTGCTCAGAA 
AACGAGGTGT GCGTGCGGCC AGGCGAATGC CGCTGCCGAC ATGGCTACTT TGGTGCCAAC 
TGCGACACAA AGTGCCCGCG CCAGTTCTGG GGCCCTGACT GCAAGGAGAG GTGCAGTTGC 
CACCCGCACG GACAGTGCGA GGACGTGACC GGACAGTGTA CGTGTCACGC GCGCCGCTGG 
GGTGCGCGCT GCGAGCATGC TTGCCAATGC CAGCATGGCA CGTGCCACCC GCGGAGCGGC 
GCGTGCCGGT GCGAGCCGGG CTGGTGGGGT GCGCAATGCG CTAGCGCTTG CTATTGCAGC 
GCTACTTCCC GGTGCGATCC ACAGACAGGC GCCTGCCTGT GCCACGTAGG CTGGTGGGGC 
CGCAGCTGTA ACAACCAGTG CGCCTGCAAC TCGTCGCCCT GCGAGCAGCA GAGTGGCCGC 
TGCCAGTGTC GCGAGCGCAT GTTTGGCGCC CGCTGTGATC GCTATTGCCA GTGCTCTCAC 
GGTCGCTGCC ACCCGGTGGA CGGCACGTGT GCCTGCGATC CTGGCTACCG GGGCAAGTAT 
TGTCGCGAGC CATGCCCCGC TGGATTCTAT GGCCCGGGCT GTCGCCGTCG GTGTGGCCAA 
TGCAAAGGCC AGCAGCCGTG CACGGTAGTC GAAGGCCGCT GTCTGACATG CGAGCCCGGC 
TGGAACGGAA CCAAATGTGA CCAACCCTGC GCCACCGGTT TCTACGGCGA AGGTTGTGGC 
CACCGCTGCC CACCCTGCCG CGACGGGCAT GCCTGCAACC ATGTCACCGG CAAGTGTACG 
CACTGCAATG CGGGCTGGAT CGGCGACCGG TGCGAGACTA AGTGCAGTAA TGGCACTTAC 
GGTGAGGACT GTGCCTTCGT GTGCTCTGAT TGCGGCAGCG GCCACTGTGA CTTCCAGTCC 
GGGCGCTGCC TTTGCAGCCC TGGTGTTCAC GGACCTCACT GTAATGTAAC TTGCCCGGCC 
GGGCTCCACG GCGTGGACTG CGCCCAGGCC TGCAGCTGTC ACGAGGAATC ATGCGACCCG 
GTCACCGGTG CCTGCCACCT GGAGACCAAT CAGCGCAAAG GTGTGATGGG CGCGGGCGCT 
CTGCTCACGC TGCTCCTCGG CCTGCTGCTC TCGCTGCTCG GTTGTTGCTG CGCCTGCCGG 
GGCAAGGACT CGGCGCGCCG GGAGCTCACC CTTGGAAGGA AGAAGGCGCC TCAACGTTTT 
TGTGGAAGCT TCAGCCGCAT CAGCATGAAG CTGCCCCGAA TCCCGCTTCG CAGGCAGAAG 
CTGCCCAAAG TCGTAGTGGC CCATCATGAC CTAGACAACA CACTCAACTG CAGTTTTCTG 
GACCCACCCT CAGGGCTGGA GCAGCCCTCT CCATCATGGT CCTCCAGGGC CTCCTTCTCA 
TCATTCGACA CCACAGATGA AGGCCCTGTG TACTGTGTGC CCCACGAGGA AGCGACTGCC 
GACAGCCGAG ACCTGGAAGC GACTGCCGCT CTCACTGAGG TGGCCGCTGT GTCCTTAGAG 
CCCACGGGCA CCTCGACGCC CGGGGAGGAG GCAGCGGTCC TCCCTGCATC CTCAGACAGC 
GAGCGCTCCG CATCAAGCGT GGAGGGGCCG AGCGGGGCGC TGTACGCGCG TGTGGCCCGG 
CGCGAGGCCC GGCCGGCCCG GACCCGAAAT GAGGCTGGGG GCTTGTCACT GTCCCCATCG 
CCCGAGCGCA GGAAGCCGCC ACCACCAGAC CCTGCCACCA AGCCTAAGGT GTCCTGGATC 
CACGGCAAGC ACAGCGCCGC TGCCGCTGCA CCGTCGCCTC CGCCTGCAGG CCGCAAGGCT 
GCGCCGAGCC CTAGCGGGAG GAAACGGACC CCCAGCAACT CGTCGGTGCA GCCCCCCGGA 
CTGACCGAGG AGGCCCCCGG CCCGGCTTCA CCCACGCCAC CCCGCGCCCG AGCGCGCGGC 
CGCGGCCTGG GGCTCTCGGA GCCAACGGAC GCGGGAGGTC CCCCGCGCAG CGCGCCCGAG 
GCCGCCTCTA TGCTGGCAGC TGAGCTGCGC GACAAGACTC GCAGCTTAGG CCGCGCCGAG 
AAGCCGCCGC CGCCGCAGAA GGCCAAGCGC TCCGTGCTCC CCGCCGCGAC GGTCCGCACA 
GCCTCGGCGT CCGAGGCCTC GGGGTCAGAG AAGGCGGCGG CCAGCGCACC TGCGCCCGAG 
ACCCCTCGGA AGAAAACCCC CATCCAGAAA CCGCCTCGGA AGAAGAGCAG GGAGGCAGCG 
GGGGAGCCGA GTAGGGCGGG CACGGCCCCC GGAGCTTCCT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Scarf2 ( XM_006522042.1 ) cDNA ORF clone, Mus musculus(house mouse) -> XP_006522105.1 Mus musculus scavenger receptor class F, member 2 (Scarf2), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OMu52057
Clone ID Related Accession (Same CDS sequence)	XM_006522042.1
Accession Version	XM_006522042.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2517bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-08-07
Organism	Mus musculus(house mouse)
Product	scavenger receptor class F member 2 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000082.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGGGCG CAGGGTCCCG GGGGGCCGGG CCGGCGCGGC GCCAGGGAGC CCGAGGGCTG 
GGACTGCTGC TGCTGCTCTG GCTGCTGCCC GGTCTCGCGG CGCCCCAGGA CTTGAACCCG 
CGAGGCCGCA ACGTGTGCCG CACGCCCGGT TCCCAGGTGC TCACGTGTTG CGCTGGCTGG 
AGGCAGCTGG GGGATGAGTG TGGGATAGCG GTGTGCGAAG GCAATTCCAC GTGCTCAGAA 
AACGAGGTGT GCGTGCGGCC AGGCGAATGC CGCTGCCGAC ATGGCTACTT TGGTGCCAAC 
TGCGACACAA AGTGCCCGCG CCAGTTCTGG GGCCCTGACT GCAAGGAGAG GTGCAGTTGC 
CACCCGCACG GACAGTGCGA GGACGTGACC GGACAGTGTA CGTGTCACGC GCGCCGCTGG 
GGTGCGCGCT GCGAGCATGC TTGCCAATGC CAGCATGGCA CGTGCCACCC GCGGAGCGGC 
GCGTGCCGGT GCGAGCCGGG CTGGTGGGGT GCGCAATGCG CTAGCGCTTG CTATTGCAGC 
GCTACTTCCC GGTGCGATCC ACAGACAGGC GCCTGCCTGT GCCACGTAGG CTGGTGGGGC 
CGCAGCTGTA ACAACCAGTG CGCCTGCAAC TCGTCGCCCT GCGAGCAGCA GAGTGGCCGC 
TGCCAGTGTC GCGAGCGCAT GTTTGGCGCC CGCTGTGATC GCTATTGCCA GTGCTCTCAC 
GGTCGCTGCC ACCCGGTGGA CGGCACGTGT GCCTGCGATC CTGGCTACCG GGGCAAGTAT 
TGTCGCGAGC CATGCCCCGC TGGATTCTAT GGCCCGGGCT GTCGCCGTCG GTGTGGCCAA 
TGCAAAGGCC AGCAGCCGTG CACGGTAGTC GAAGGCCGCT GTCTGACATG CGAGCCCGGC 
TGGAACGGAA CCAAATGTGA CCAACCCTGC GCCACCGGTT TCTACGGCGA AGGTTGTGGC 
CACCGCTGCC CACCCTGCCG CGACGGGCAT GCCTGCAACC ATGTCACCGG CAAGTGTACG 
CACTGCAATG CGGGCTGGAT CGGCGACCGG TGCGAGACTA AGTGCAGTAA TGGCACTTAC 
GGTGAGGACT GTGCCTTCGT GTGCTCTGAT TGCGGCAGCG GCCACTGTGA CTTCCAGTCC 
GGGCGCTGCC TTTGCAGCCC TGGTGTTCAC GGACCTCACT GTAATGTAAC TTGCCCGGCC 
GGGCTCCACG GCGTGGACTG CGCCCAGGCC TGCAGCTGTC ACGAGGAATC ATGCGACCCG 
GTCACCGGTG CCTGCCACCT GGAGACCAAT CAGCGCAAAG GTGTGATGGG CGCGGGCGCT 
CTGCTCACGC TGCTCCTCGG CCTGCTGCTC TCGCTGCTCG GTTGTTGCTG CGCCTGCCGG 
GGCAAGGACT CGGCGCGCCG GCCCCGCCCC TGCAGGGAGC TCACCCTTGG AAGGAAGAAG 
GCGCCTCAAC GTTTTTGTGG AAGCTTCAGC CGCATCAGCA TGAAGCTGCC CCGAATCCCG 
CTTCGCAGGC AGAAGCTGCC CAAAGTCGTA GTGGCCCATC ATGACCTAGA CAACACACTC 
AACTGCAGTT TTCTGGACCC ACCCTCAGGG CTGGAGCAGC CCTCTCCATC ATGGTCCTCC 
AGGGCCTCCT TCTCATCATT CGACACCACA GATGAAGGCC CTGTGTACTG TGTGCCCCAC 
GAGGAAGCGA CTGCCGACAG CCGAGACCTG GAAGCGACTG CCGCTCTCAC TGAGGTGGCC 
GCTGTGTCCT TAGAGCCCAC GGGCACCTCG ACGCCCGGGG AGGAGGCAGC GGTCCTCCCT 
GCATCCTCAG ACAGCGAGCG CTCCGCATCA AGCGTGGAGG GGCCGAGCGG GGCGCTGTAC 
GCGCGTGTGG CCCGGCGCGA GGCCCGGCCG GCCCGGACCC GAAATGAGGC TGGGGGCTTG 
TCACTGTCCC CATCGCCCGA GCGCAGGAAG CCGCCACCAC CAGACCCTGC CACCAAGCCT 
AAGGTGTCCT GGATCCACGG CAAGCACAGC GCCGCTGCCG CTGCACCGTC GCCTCCGCCT 
GCAGGCCGCA AGGCTGCGCC GAGCCCTAGC GGGAGGAAAC GGACCCCCAG CAACTCGTCG 
GTGCAGCCCC CCGGACTGAC CGAGGAGGCC CCCGGCCCGG CTTCACCCAC GCCACCCCGC 
GCCCGAGCGC GCGGCCGCGG CCTGGGGCTC TCGGAGCCAA CGGACGCGGG AGGTCCCCCG 
CGCAGCGCGC CCGAGGCCGC CTCTATGCTG GCAGCTGAGC TGCGCGACAA GACTCGCAGC 
TTAGGCCGCG CCGAGAAGCC GCCGCCGCCG CAGAAGGCCA AGCGCTCCGT GCTCCCCGCC 
GCGACGGTCC GCACAGCCTC GGCGTCCGAG GCCTCGGGGT CAGAGAAGGC GGCGGCCAGC 
GCACCTGCGC CCGAGACCCC TCGGAAGAAA ACCCCCATCC AGAAACCGCC TCGGAAGAAG 
AGCAGGGAGG CAGCGGGGGA GCCGAGTAGG GCGGGCACGG CCCCCGGAGC TTCCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006522105.1
CDS	79..2595
Translation	MEGAGSRGAGPARRQGARGLGLLLLLWLLPGLAAPQDLNPRGRNVCRTPGSQVLTCCAGWRQLGDECGIAVCEGNSTCSENEVCVRPGECRCRHGYFGANCDTKCPRQFWGPDCKERCSCHPHGQCEDVTGQCTCHARRWGARCEHACQCQHGTCHPRSGACRCEPGWWGAQCASACYCSATSRCDPQTGACLCHVGWWGRSCNNQCACNSSPCEQQSGRCQCRERMFGARCDRYCQCSHGRCHPVDGTCACDPGYRGKYCREPCPAGFYGPGCRRRCGQCKGQQPCTVVEGRCLTCEPGWNGTKCDQPCATGFYGEGCGHRCPPCRDGHACNHVTGKCTHCNAGWIGDRCETKCSNGTYGEDCAFVCSDCGSGHCDFQSGRCLCSPGVHGPHCNVTCPAGLHGVDCAQACSCHEESCDPVTGACHLETNQRKGVMGAGALLTLLLGLLLSLLGCCCACRGKDSARRPRPCRELTLGRKKAPQRFCGSFSRISMKLPRIPLRRQKLPKVVVAHHDLDNTLNCSFLDPPSGLEQPSPSWSSRASFSSFDTTDEGPVYCVPHEEATADSRDLEATAALTEVAAVSLEPTGTSTPGEEAAVLPASSDSERSASSVEGPSGALYARVARREARPARTRNEAGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAAPSPPPAGRKAAPSPSGRKRTPSNSSVQPPGLTEEAPGPASPTPPRARARGRGLGLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLGRAEKPPPPQKAKRSVLPAATVRTASASEASGSEKAAASAPAPETPRKKTPIQKPPRKKSREAAGEPSRAGTAPGAS

Target ORF information:

RefSeq Version	XM_006522042.1
Organism	Mus musculus(house mouse)
Definition	Mus musculus scavenger receptor class F, member 2 (Scarf2), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006522042.1

ORF Insert Sequence:

ATGGAGGGCG CAGGGTCCCG GGGGGCCGGG CCGGCGCGGC GCCAGGGAGC CCGAGGGCTG 
GGACTGCTGC TGCTGCTCTG GCTGCTGCCC GGTCTCGCGG CGCCCCAGGA CTTGAACCCG 
CGAGGCCGCA ACGTGTGCCG CACGCCCGGT TCCCAGGTGC TCACGTGTTG CGCTGGCTGG 
AGGCAGCTGG GGGATGAGTG TGGGATAGCG GTGTGCGAAG GCAATTCCAC GTGCTCAGAA 
AACGAGGTGT GCGTGCGGCC AGGCGAATGC CGCTGCCGAC ATGGCTACTT TGGTGCCAAC 
TGCGACACAA AGTGCCCGCG CCAGTTCTGG GGCCCTGACT GCAAGGAGAG GTGCAGTTGC 
CACCCGCACG GACAGTGCGA GGACGTGACC GGACAGTGTA CGTGTCACGC GCGCCGCTGG 
GGTGCGCGCT GCGAGCATGC TTGCCAATGC CAGCATGGCA CGTGCCACCC GCGGAGCGGC 
GCGTGCCGGT GCGAGCCGGG CTGGTGGGGT GCGCAATGCG CTAGCGCTTG CTATTGCAGC 
GCTACTTCCC GGTGCGATCC ACAGACAGGC GCCTGCCTGT GCCACGTAGG CTGGTGGGGC 
CGCAGCTGTA ACAACCAGTG CGCCTGCAAC TCGTCGCCCT GCGAGCAGCA GAGTGGCCGC 
TGCCAGTGTC GCGAGCGCAT GTTTGGCGCC CGCTGTGATC GCTATTGCCA GTGCTCTCAC 
GGTCGCTGCC ACCCGGTGGA CGGCACGTGT GCCTGCGATC CTGGCTACCG GGGCAAGTAT 
TGTCGCGAGC CATGCCCCGC TGGATTCTAT GGCCCGGGCT GTCGCCGTCG GTGTGGCCAA 
TGCAAAGGCC AGCAGCCGTG CACGGTAGTC GAAGGCCGCT GTCTGACATG CGAGCCCGGC 
TGGAACGGAA CCAAATGTGA CCAACCCTGC GCCACCGGTT TCTACGGCGA AGGTTGTGGC 
CACCGCTGCC CACCCTGCCG CGACGGGCAT GCCTGCAACC ATGTCACCGG CAAGTGTACG 
CACTGCAATG CGGGCTGGAT CGGCGACCGG TGCGAGACTA AGTGCAGTAA TGGCACTTAC 
GGTGAGGACT GTGCCTTCGT GTGCTCTGAT TGCGGCAGCG GCCACTGTGA CTTCCAGTCC 
GGGCGCTGCC TTTGCAGCCC TGGTGTTCAC GGACCTCACT GTAATGTAAC TTGCCCGGCC 
GGGCTCCACG GCGTGGACTG CGCCCAGGCC TGCAGCTGTC ACGAGGAATC ATGCGACCCG 
GTCACCGGTG CCTGCCACCT GGAGACCAAT CAGCGCAAAG GTGTGATGGG CGCGGGCGCT 
CTGCTCACGC TGCTCCTCGG CCTGCTGCTC TCGCTGCTCG GTTGTTGCTG CGCCTGCCGG 
GGCAAGGACT CGGCGCGCCG GCCCCGCCCC TGCAGGGAGC TCACCCTTGG AAGGAAGAAG 
GCGCCTCAAC GTTTTTGTGG AAGCTTCAGC CGCATCAGCA TGAAGCTGCC CCGAATCCCG 
CTTCGCAGGC AGAAGCTGCC CAAAGTCGTA GTGGCCCATC ATGACCTAGA CAACACACTC 
AACTGCAGTT TTCTGGACCC ACCCTCAGGG CTGGAGCAGC CCTCTCCATC ATGGTCCTCC 
AGGGCCTCCT TCTCATCATT CGACACCACA GATGAAGGCC CTGTGTACTG TGTGCCCCAC 
GAGGAAGCGA CTGCCGACAG CCGAGACCTG GAAGCGACTG CCGCTCTCAC TGAGGTGGCC 
GCTGTGTCCT TAGAGCCCAC GGGCACCTCG ACGCCCGGGG AGGAGGCAGC GGTCCTCCCT 
GCATCCTCAG ACAGCGAGCG CTCCGCATCA AGCGTGGAGG GGCCGAGCGG GGCGCTGTAC 
GCGCGTGTGG CCCGGCGCGA GGCCCGGCCG GCCCGGACCC GAAATGAGGC TGGGGGCTTG 
TCACTGTCCC CATCGCCCGA GCGCAGGAAG CCGCCACCAC CAGACCCTGC CACCAAGCCT 
AAGGTGTCCT GGATCCACGG CAAGCACAGC GCCGCTGCCG CTGCACCGTC GCCTCCGCCT 
GCAGGCCGCA AGGCTGCGCC GAGCCCTAGC GGGAGGAAAC GGACCCCCAG CAACTCGTCG 
GTGCAGCCCC CCGGACTGAC CGAGGAGGCC CCCGGCCCGG CTTCACCCAC GCCACCCCGC 
GCCCGAGCGC GCGGCCGCGG CCTGGGGCTC TCGGAGCCAA CGGACGCGGG AGGTCCCCCG 
CGCAGCGCGC CCGAGGCCGC CTCTATGCTG GCAGCTGAGC TGCGCGACAA GACTCGCAGC 
TTAGGCCGCG CCGAGAAGCC GCCGCCGCCG CAGAAGGCCA AGCGCTCCGT GCTCCCCGCC 
GCGACGGTCC GCACAGCCTC GGCGTCCGAG GCCTCGGGGT CAGAGAAGGC GGCGGCCAGC 
GCACCTGCGC CCGAGACCCC TCGGAAGAAA ACCCCCATCC AGAAACCGCC TCGGAAGAAG 
AGCAGGGAGG CAGCGGGGGA GCCGAGTAGG GCGGGCACGG CCCCCGGAGC TTCCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Transcriptional targets of TWIST1 in the cranial mesoderm regulate cell-matrix interactions and mesenchyme maintenance.
Developmental biology418(1)189-203(2016 10)
Bildsoe H,Fan X,Wilkie EE,Ashoti A,Jones VJ,Power M,Qin J,Wang J,Tam PPL,Loebel DAF

High-throughput discovery of novel developmental phenotypes.
Nature537(7621)508-514(2016 09)
Dickinson ME,Flenniken AM,Ji X,Teboul L,Wong MD,White JK,Meehan TF,Weninger WJ,Westerberg H,Adissu H,Baker CN,Bower L,Brown JM,Caddle LB,Chiani F,Clary D,Cleak J,Daly MJ,Denegre JM,Doe B,Dolan ME,Edie SM,Fuchs H,Gailus-Durner V,Galli A,Gambadoro A,Gallegos J,Guo S,Horner NR,Hsu CW,Johnson SJ,Kalaga S,Keith LC,Lanoue L,Lawson TN,Lek M,Mark M,Marschall S,Mason J,McElwee ML,Newbigging S,Nutter LM,Peterson KA,Ramirez-Solis R,Rowland DJ,Ryder E,Samocha KE,Seavitt JR,Selloum M,Szoke-Kovacs Z,Tamura M,Trainor AG,Tudose I,Wakana S,Warren J,Wendling O,West DB,Wong L,Yoshiki A,,,,,,,,,MacArthur DG,Tocchini-Valentini GP,Gao X,Flicek P,Bradley A,Skarnes WC,Justice MJ,Parkinson HE,Moore M,Wells S,Braun RE,Svenson KL,de Angelis MH,Herault Y,Mohun T,Mallon AM,Henkelman RM,Brown SD,Adams DJ,Lloyd KC,McKerlie C,Beaudet AL,Bu?an M,Murray SA

A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain.
Neuron83(2)309-323(2014 Jul)
Thompson CL,Ng L,Menon V,Martinez S,Lee CK,Glattfelder K,Sunkin SM,Henry A,Lau C,Dang C,Garcia-Lopez R,Martinez-Ferre A,Pombero A,Rubenstein JLR,Wakeman WB,Hohmann J,Dee N,Sodt AJ,Young R,Smith K,Nguyen TN,Kidney J,Kuan L,Jeromin A,Kaykas A,Miller J,Page D,Orta G,Bernard A,Riley Z,Smith S,Wohnoutka P,Hawrylycz MJ,Puelles L,Jones AR

The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.
Nucleic acids research42(Database issue)D802-9(2014 Jan)
Koscielny G,Yaikhom G,Iyer V,Meehan TF,Morgan H,Atienza-Herrero J,Blake A,Chen CK,Easty R,Di Fenza A,Fiegel T,Grifiths M,Horne A,Karp NA,Kurbatova N,Mason JC,Matthews P,Oakley DJ,Qazi A,Regnart J,Retha A,Santos LA,Sneddon DJ,Warren J,Westerberg H,Wilson RJ,Melvin DG,Smedley D,Brown SD,Flicek P,Skarnes WC,Mallon AM,Parkinson H

SREC-I, a type F scavenger receptor, is an endocytic receptor for calreticulin.
The Journal of biological chemistry279(49)51250-7(2004 Dec)
Berwin B,Delneste Y,Lovingood RV,Post SR,Pizzo SV

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Scarf2 cDNA ORF clone, Mus musculus(house mouse)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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