ORF » Species Summary » Medicago truncatula » LOC25492398 cDNA ORF clone

LOC25492398 cDNA ORF clone, Medicago truncatula(barrel medic)

The following LOC25492398 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC25492398 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OMe188019 XM_013600501.1
Latest version!		 Medicago truncatula ubiquitin-protein ligase, putative partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $258.30
$369.00
OMe263087 XM_013600501.2
Latest version!		 Medicago truncatula F-box/FBD/LRR-repeat protein At1g13570 (LOC25492398), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC25492398 ( XM_013600501.1 ) cDNA ORF clone, Medicago truncatula(barrel medic) -> XP_013455955.1 Medicago truncatula ubiquitin-protein ligase, putative partial mRNA.
    Price & Availability↑
    CloneID OMe188019
    Clone ID Related Accession (Same CDS sequence) XM_013600501.1
    Accession Version XM_013600501.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1335bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2015-08-24
    Organism Medicago truncatula(barrel medic)
    Product ubiquitin-protein ligase, putative
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_016410). ##Genome-Annotation-Data-START## Annotation Provider :: JCVI Annotation Version :: Mt4.0v2 Annotation Pipeline :: JCVI Eukaryotic Genome Annotation Pipeline Annotation Method :: EVidenceModeler (EVM), PASA Features Annotated :: Gene; mRNA; CDS; tRNA URL :: http://www.jcvi.org/medicago ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGTATATAA AGGGAAGAAA ACGTTCAAAG TCTACCTGCT TGACAATCAA AGATGCAGAG 
    CTGGATAGGA TTAGTTCCTT ACCAGGTAAT GTAACAGACC AGATTCTCTT ACACTTGCCA 
    ATTAAGGAAG CATTGAGAAC AAGTGTATTA TCCAGCAAAT GGAGAAACAA ATGGTACACT 
    ATGCCAAATC TTGTGTTCGA TAAACATTGT GTCTCTGATG CAACTTTTCA AGACCCTTCA 
    GGTATCAGTA ACAAGTTTTT GAGAATTGTT GATCATGTAC TTCTACTTCA TTCTGGGTCA 
    ATTGACAAGT TTAAGATCTG CGACAAGTAT CAAAATCTCA TTGGTATGAG TCCTGCAACT 
    GATACTGCTC GATGGATTCT TCATTTAATA AGAAGGTCTA TTAAAGAACT TGTGTTGGAT 
    ATCAGGACAG GGCAAAGTTA TAAGATACCT TGGTGCTTAT TCTCTTGTCA AAGTTTACAT 
    CATTTAGAAT TAACAAGTTG TTGGCTTAAA CCTCCAACAA CGTTTGAAGG CTTCAGGAAC 
    TTGGAAAGTC TTTCTTTGAT CGAAGTTACA ATGACTCAAG ATGCTTTCGA AAACTTGATA 
    TTCAAGTGCC CTTTGCTTGA AACATTGGAA TTAGTTAATC TTCATGGTTT CACCCAAATT 
    AATATCCACA CACCCAATCT GAAGAGTCTT CTCATCGTGG GTAAATTTGA CGATATTAGC 
    TTTGACAAAA CTTTCCAATT TGTTACGGTA CTCGTTGATT TAAGTTTGTA TTTGAACTCT 
    GAAACTAATC AACGTAGATT GCATGGATGC TCTAGTAGTT TGCTCAATTT TTTCAATCAT 
    CGACCTCGCA TTGTAGGCTT AGTGATGAAG AATTACTTTT TAAAGTATTT GGCTGCAGGT 
    GTCGTTCCAG TAAAGCTTCC TACACCTTGT ATTCATCTAA GCCATCTTTT GTTAAACATA 
    AACTTCAATG ACTTGAAGGA AATCTCGGCT GCTCTCTGCT TGCTCAGAAG CTCACCTAAT 
    CTGCGAAAAT TAAAAATATC TGCACGGATA GAGGAGCAGA CTGACCTCTT AACACCGGCC 
    TCCTATTGTT GGGAAGATAT CTTTTCCCGG CCAGACATGC CCCTCAAAGT GCAACATGTA 
    ACAATAGACA TAATCTCTGG TTTTCAATCT GAGTTAGATT TTATCAGATT TCTACTTCTC 
    AATTCTCCTA TGTTAGAAAA GATGACTGTG AAGCCTCTTG GAAATGTTAG ACCAGAATTG 
    GTCACAGAAC TTATTAGGTT CAAGAGTGCA TCGGGAGAAG CTGAAGTTAT TTACCATGTG 
    GAAGACTCTT CATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_013455955.1
    CDS1..1335
    Translation

    Target ORF information:

    RefSeq Version XM_013600501.1
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula ubiquitin-protein ligase, putative partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_013600501.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGTATATAA AGGGAAGAAA ACGTTCAAAG TCTACCTGCT TGACAATCAA AGATGCAGAG 
    CTGGATAGGA TTAGTTCCTT ACCAGGTAAT GTAACAGACC AGATTCTCTT ACACTTGCCA 
    ATTAAGGAAG CATTGAGAAC AAGTGTATTA TCCAGCAAAT GGAGAAACAA ATGGTACACT 
    ATGCCAAATC TTGTGTTCGA TAAACATTGT GTCTCTGATG CAACTTTTCA AGACCCTTCA 
    GGTATCAGTA ACAAGTTTTT GAGAATTGTT GATCATGTAC TTCTACTTCA TTCTGGGTCA 
    ATTGACAAGT TTAAGATCTG CGACAAGTAT CAAAATCTCA TTGGTATGAG TCCTGCAACT 
    GATACTGCTC GATGGATTCT TCATTTAATA AGAAGGTCTA TTAAAGAACT TGTGTTGGAT 
    ATCAGGACAG GGCAAAGTTA TAAGATACCT TGGTGCTTAT TCTCTTGTCA AAGTTTACAT 
    CATTTAGAAT TAACAAGTTG TTGGCTTAAA CCTCCAACAA CGTTTGAAGG CTTCAGGAAC 
    TTGGAAAGTC TTTCTTTGAT CGAAGTTACA ATGACTCAAG ATGCTTTCGA AAACTTGATA 
    TTCAAGTGCC CTTTGCTTGA AACATTGGAA TTAGTTAATC TTCATGGTTT CACCCAAATT 
    AATATCCACA CACCCAATCT GAAGAGTCTT CTCATCGTGG GTAAATTTGA CGATATTAGC 
    TTTGACAAAA CTTTCCAATT TGTTACGGTA CTCGTTGATT TAAGTTTGTA TTTGAACTCT 
    GAAACTAATC AACGTAGATT GCATGGATGC TCTAGTAGTT TGCTCAATTT TTTCAATCAT 
    CGACCTCGCA TTGTAGGCTT AGTGATGAAG AATTACTTTT TAAAGTATTT GGCTGCAGGT 
    GTCGTTCCAG TAAAGCTTCC TACACCTTGT ATTCATCTAA GCCATCTTTT GTTAAACATA 
    AACTTCAATG ACTTGAAGGA AATCTCGGCT GCTCTCTGCT TGCTCAGAAG CTCACCTAAT 
    CTGCGAAAAT TAAAAATATC TGCACGGATA GAGGAGCAGA CTGACCTCTT AACACCGGCC 
    TCCTATTGTT GGGAAGATAT CTTTTCCCGG CCAGACATGC CCCTCAAAGT GCAACATGTA 
    ACAATAGACA TAATCTCTGG TTTTCAATCT GAGTTAGATT TTATCAGATT TCTACTTCTC 
    AATTCTCCTA TGTTAGAAAA GATGACTGTG AAGCCTCTTG GAAATGTTAG ACCAGAATTG 
    GTCACAGAAC TTATTAGGTT CAAGAGTGCA TCGGGAGAAG CTGAAGTTAT TTACCATGTG 
    GAAGACTCTT CATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC25492398 ( XM_013600501.2 ) cDNA ORF clone, Medicago truncatula(barrel medic) -> XP_013455955.2 Medicago truncatula F-box/FBD/LRR-repeat protein At1g13570 (LOC25492398), mRNA.
    Price & Availability↑
    CloneID OMe263087
    Clone ID Related Accession (Same CDS sequence) XM_013600501.2
    Accession Version XM_013600501.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1326bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-22
    Organism Medicago truncatula(barrel medic)
    Product F-box/FBD/LRR-repeat protein At1g13570
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_016410.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2018 this sequence version replaced XM_013600501.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Medicago truncatula Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGGAAGAA AACGTTCAAA GTCTACCTGC TTGACAATCA AAGATGCAGA GCTGGATAGG 
    ATTAGTTCCT TACCAGGTAA TGTAACAGAC CAGATTCTCT TACACTTGCC AATTAAGGAA 
    GCATTGAGAA CAAGTGTATT ATCCAGCAAA TGGAGAAACA AATGGTACAC TATGCCAAAT 
    CTTGTGTTCG ATAAACATTG TGTCTCTGAT GCAACTTTTC AAGACCCTTC AGGTATCAGT 
    AACAAGTTTT TGAGAATTGT TGATCATGTA CTTCTACTTC ATTCTGGGTC AATTGACAAG 
    TTTAAGATCT GCGACAAGTA TCAAAATCTC ATTGGTATGA GTCCTGCAAC TGATACTGCT 
    CGATGGATTC TTCATTTAAT AAGAAGGTCT ATTAAAGAAC TTGTGTTGGA TATCAGGACA 
    GGGCAAAGTT ATAAGATACC TTGGTGCTTA TTCTCTTGTC AAAGTTTACA TCATTTAGAA 
    TTAACAAGTT GTTGGCTTAA ACCTCCAACA ACGTTTGAAG GCTTCAGGAA CTTGGAAAGT 
    CTTTCTTTGA TCGAAGTTAC AATGACTCAA GATGCTTTCG AAAACTTGAT ATTCAAGTGC 
    CCTTTGCTTG AAACATTGGA ATTAGTTAAT CTTCATGGTT TCACCCAAAT TAATATCCAC 
    ACACCCAATC TGAAGAGTCT TCTCATCGTG GGTAAATTTG ACGATATTAG CTTTGACAAA 
    ACTTTCCAAT TTGTTACGGT ACTCGTTGAT TTAAGTTTGT ATTTGAACTC TGAAACTAAT 
    CAACGTAGAT TGCATGGATG CTCTAGTAGT TTGCTCAATT TTTTCAATCA TCGACCTCGC 
    ATTGTAGGCT TAGTGATGAA GAATTACTTT TTAAAGTATT TGGCTGCAGG TGTCGTTCCA 
    GTAAAGCTTC CTACACCTTG TATTCATCTA AGCCATCTTT TGTTAAACAT AAACTTCAAT 
    GACTTGAAGG AAATCTCGGC TGCTCTCTGC TTGCTCAGAA GCTCACCTAA TCTGCGAAAA 
    TTAAAAATAT CTGCACGGAT AGAGGAGCAG ACTGACCTCT TAACACCGGC CTCCTATTGT 
    TGGGAAGATA TCTTTTCCCG GCCAGACATG CCCCTCAAAG TGCAACATGT AACAATAGAC 
    ATAATCTCTG GTTTTCAATC TGAGTTAGAT TTTATCAGAT TTCTACTTCT CAATTCTCCT 
    ATGTTAGAAA AGATGACTGT GAAGCCTCTT GGAAATGTTA GACCAGAATT GGTCACAGAA 
    CTTATTAGGT TCAAGAGTGC ATCGGGAGAA GCTGAAGTTA TTTACCATGT GGAAGACTCT 
    TCATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_013455955.2
    CDS181..1506
    Translation

    Target ORF information:

    RefSeq Version XM_013600501.2
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula F-box/FBD/LRR-repeat protein At1g13570 (LOC25492398), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_013600501.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGGAAGAA AACGTTCAAA GTCTACCTGC TTGACAATCA AAGATGCAGA GCTGGATAGG 
    ATTAGTTCCT TACCAGGTAA TGTAACAGAC CAGATTCTCT TACACTTGCC AATTAAGGAA 
    GCATTGAGAA CAAGTGTATT ATCCAGCAAA TGGAGAAACA AATGGTACAC TATGCCAAAT 
    CTTGTGTTCG ATAAACATTG TGTCTCTGAT GCAACTTTTC AAGACCCTTC AGGTATCAGT 
    AACAAGTTTT TGAGAATTGT TGATCATGTA CTTCTACTTC ATTCTGGGTC AATTGACAAG 
    TTTAAGATCT GCGACAAGTA TCAAAATCTC ATTGGTATGA GTCCTGCAAC TGATACTGCT 
    CGATGGATTC TTCATTTAAT AAGAAGGTCT ATTAAAGAAC TTGTGTTGGA TATCAGGACA 
    GGGCAAAGTT ATAAGATACC TTGGTGCTTA TTCTCTTGTC AAAGTTTACA TCATTTAGAA 
    TTAACAAGTT GTTGGCTTAA ACCTCCAACA ACGTTTGAAG GCTTCAGGAA CTTGGAAAGT 
    CTTTCTTTGA TCGAAGTTAC AATGACTCAA GATGCTTTCG AAAACTTGAT ATTCAAGTGC 
    CCTTTGCTTG AAACATTGGA ATTAGTTAAT CTTCATGGTT TCACCCAAAT TAATATCCAC 
    ACACCCAATC TGAAGAGTCT TCTCATCGTG GGTAAATTTG ACGATATTAG CTTTGACAAA 
    ACTTTCCAAT TTGTTACGGT ACTCGTTGAT TTAAGTTTGT ATTTGAACTC TGAAACTAAT 
    CAACGTAGAT TGCATGGATG CTCTAGTAGT TTGCTCAATT TTTTCAATCA TCGACCTCGC 
    ATTGTAGGCT TAGTGATGAA GAATTACTTT TTAAAGTATT TGGCTGCAGG TGTCGTTCCA 
    GTAAAGCTTC CTACACCTTG TATTCATCTA AGCCATCTTT TGTTAAACAT AAACTTCAAT 
    GACTTGAAGG AAATCTCGGC TGCTCTCTGC TTGCTCAGAA GCTCACCTAA TCTGCGAAAA 
    TTAAAAATAT CTGCACGGAT AGAGGAGCAG ACTGACCTCT TAACACCGGC CTCCTATTGT 
    TGGGAAGATA TCTTTTCCCG GCCAGACATG CCCCTCAAAG TGCAACATGT AACAATAGAC 
    ATAATCTCTG GTTTTCAATC TGAGTTAGAT TTTATCAGAT TTCTACTTCT CAATTCTCCT 
    ATGTTAGAAA AGATGACTGT GAAGCCTCTT GGAAATGTTA GACCAGAATT GGTCACAGAA 
    CTTATTAGGT TCAAGAGTGC ATCGGGAGAA GCTGAAGTTA TTTACCATGT GGAAGACTCT 
    TCATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    An improved genome release (version Mt4.0) for the model legume Medicago truncatula.
    BMC genomics15312(2014 Apr)
    Tang H,Krishnakumar V,Bidwell S,Rosen B,Chan A,Zhou S,Gentzbittel L,Childs KL,Yandell M,Gundlach H,Mayer KF,Schwartz DC,Town CD


    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature480(7378)520-4(2011 Nov)
    Young ND,Debell? F,Oldroyd GE,Geurts R,Cannon SB,Udvardi MK,Benedito VA,Mayer KF,Gouzy J,Schoof H,Van de Peer Y,Proost S,Cook DR,Meyers BC,Spannagl M,Cheung F,De Mita S,Krishnakumar V,Gundlach H,Zhou S,Mudge J,Bharti AK,Murray JD,Naoumkina MA,Rosen B,Silverstein KA,Tang H,Rombauts S,Zhao PX,Zhou P,Barbe V,Bardou P,Bechner M,Bellec A,Berger A,Berg?s H,Bidwell S,Bisseling T,Choisne N,Couloux A,Denny R,Deshpande S,Dai X,Doyle JJ,Dudez AM,Farmer AD,Fouteau S,Franken C,Gibelin C,Gish J,Goldstein S,Gonz?lez AJ,Green PJ,Hallab A,Hartog M,Hua A,Humphray SJ,Jeong DH,Jing Y,J?cker A,Kenton SM,Kim DJ,Klee K,Lai H,Lang C,Lin S,Macmil SL,Magdelenat G,Matthews L,McCorrison J,Monaghan EL,Mun JH,Najar FZ,Nicholson C,Noirot C,O'Bleness M,Paule CR,Poulain J,Prion F,Qin B,Qu C,Retzel EF,Riddle C,Sallet E,Samain S,Samson N,Sanders I,Saurat O,Scarpelli C,Schiex T,Segurens B,Severin AJ,Sherrier DJ,Shi R,Sims S,Singer SR,Sinharoy S,Sterck L,Viollet A,Wang BB,Wang K,Wang M,Wang X,Warfsmann J,Weissenbach J,White DD,White JD,Wiley GB,Wincker P,Xing Y,Yang L,Yao Z,Ying F,Zhai J,Zhou L,Zuber A,D?nari? J,Dixon RA,May GD,Schwartz DC,Rogers J,Qu?tier F,Town CD,Roe BA


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