ORF » Species Summary » Medicago truncatula » LOC11422725 cDNA ORF clone

LOC11422725 cDNA ORF clone, Medicago truncatula(barrel medic)

The following LOC11422725 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC11422725 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OMe207636 XM_003588928.2
Latest version!		 Medicago truncatula fructan exohydrolase partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $258.30
$369.00
OMe257770 XM_024778496.1
Latest version!		 Medicago truncatula beta-fructofuranosidase, insoluble isoenzyme CWINV1 (LOC11422725), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC11422725 ( XM_003588928.2 ) cDNA ORF clone, Medicago truncatula(barrel medic) -> XP_003588976.2 Medicago truncatula fructan exohydrolase partial mRNA.
    Price & Availability↑
    CloneID OMe207636
    Clone ID Related Accession (Same CDS sequence) XM_003588928.2
    Accession Version XM_003588928.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1443bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2015-08-24
    Organism Medicago truncatula(barrel medic)
    Product fructan exohydrolase
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_016407). On Aug 25, 2015 this sequence version replaced XM_003588928.1. ##Genome-Annotation-Data-START## Annotation Provider :: JCVI Annotation Version :: Mt4.0v2 Annotation Pipeline :: JCVI Eukaryotic Genome Annotation Pipeline Annotation Method :: EVidenceModeler (EVM), PASA Features Annotated :: Gene; mRNA; CDS; tRNA URL :: http://www.jcvi.org/medicago ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGCAAACTC CAAGAGTGCA ACTTGTCACT TGCATCTCAT GCATCTTGCA ACATGTCAAT 
    GCATGCAACC ATCCACTTTG CCACCATGCA TTACATGAGA AGTGCAACTT TTCTTTCATG 
    CACCATGGAC ATGTGTCTTG CTACAAAAGT GCCGTATCAT TCACATATAA CCCTGCTGCA 
    GCAACATTTG GTCATGAGAA AATGGTATGG GGTCATTCTA TATCAAATGA TCTCATAAAT 
    TGGACTCATC TAAATGATGC TATTGTACCA ACTATACCTG GTGACATAAA CAGTTGTTGG 
    TCAGGTTCAG CCACTATACT CCCAGGTGAA AAACCTGCTA TGTTGTATAC AGGAATTGAT 
    CAAAATAGAC ACCAAGTTCA AAATTTAGCC ATGCCAAAGA ATCTGTCTGA TCCTTACTTA 
    AGGGAATGGG AAAAACATCC TCAAAATCCT TTGATGACTC CACCTAGTGG AGTTGAAGTC 
    GGTGAATTCC GAGATCCTTC AACTGCATGG CAAGGAAAGG ATGGAAAATG GAGGGTAATT 
    ATTGGTGCTC AAAATGGAGA TGAAGGAAAA ATTATTCTTT ACAAAAGTGA GGATTTTGTT 
    AAGTGGATAG TGGATCCTAT ACCTTTCTTT GCAACAGATG ATACCGGAGT TTGTGAATGT 
    CCGGATTTTT TTACTGTGTA TATCAATAGT ACAAATGGGG TGGATACAAC TATGGAAAAT 
    TCAAGTGTTA GACATGAAAA ATTTATTCCT GATGTAAATT ATACAGGAAC TTGCAAAGAC 
    TTAAGATTTG ACTATGGCCT TTTTTATGCT TCAAAGTCAT TTTTTGACTA TGCTAAGAAT 
    AGGAGAATAT TATGGGGATG GGTGGAGGAA AATGACTCTG AACAAGATGA GATTGATAAA 
    GGATGGGCTG GTTTACAGAC TATTCCAAGG AAGTTTTGGC TTGATGAAAG TGGGGAGAGA 
    TTAATGCAGT GGCCAATTGA AGAGTTAGAA AAACTTGGTG GCAATCAAAT CAATATCACT 
    GGAGAAACAC TCCAAAGTGG ATCAACTCTT GAAGTAAAAG GTATCACTGC ATCACAGGCT 
    GATGTGGAAG TTTTGTTTGG GCTACCTGAT CTACAAAGTG CTGAGCTGCT AGAACCAAGT 
    GAAACTAATC CTCAAGAACT CTGTAAAGAA CAATATGCAT CAAGAAAATG CATGATAGGG 
    CCATTTGGTT TGCAAGCCTT AGCATCAAAA GACCAGACAG AGAAGACTAC AATATCTTTC 
    CGGATATATA GAGTCGCGGA TCATTATAAA TGTTTGATGA TAAGTGACCA GACCAGGTCT 
    TCATTGAGGC AGGATCTTAA GAAACTCATA TATGCAACTA TCTTTGACAT AGATCCCAAT 
    CTCAAAACAA TTTCACTCAG AAGCCTGGTA TATTTATTTT TTATCATATT TGTGTTTATG 
    TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_003588976.2
    CDS1..1443
    Translation

    Target ORF information:

    RefSeq Version XM_003588928.2
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula fructan exohydrolase partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_003588928.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGCAAACTC CAAGAGTGCA ACTTGTCACT TGCATCTCAT GCATCTTGCA ACATGTCAAT 
    GCATGCAACC ATCCACTTTG CCACCATGCA TTACATGAGA AGTGCAACTT TTCTTTCATG 
    CACCATGGAC ATGTGTCTTG CTACAAAAGT GCCGTATCAT TCACATATAA CCCTGCTGCA 
    GCAACATTTG GTCATGAGAA AATGGTATGG GGTCATTCTA TATCAAATGA TCTCATAAAT 
    TGGACTCATC TAAATGATGC TATTGTACCA ACTATACCTG GTGACATAAA CAGTTGTTGG 
    TCAGGTTCAG CCACTATACT CCCAGGTGAA AAACCTGCTA TGTTGTATAC AGGAATTGAT 
    CAAAATAGAC ACCAAGTTCA AAATTTAGCC ATGCCAAAGA ATCTGTCTGA TCCTTACTTA 
    AGGGAATGGG AAAAACATCC TCAAAATCCT TTGATGACTC CACCTAGTGG AGTTGAAGTC 
    GGTGAATTCC GAGATCCTTC AACTGCATGG CAAGGAAAGG ATGGAAAATG GAGGGTAATT 
    ATTGGTGCTC AAAATGGAGA TGAAGGAAAA ATTATTCTTT ACAAAAGTGA GGATTTTGTT 
    AAGTGGATAG TGGATCCTAT ACCTTTCTTT GCAACAGATG ATACCGGAGT TTGTGAATGT 
    CCGGATTTTT TTACTGTGTA TATCAATAGT ACAAATGGGG TGGATACAAC TATGGAAAAT 
    TCAAGTGTTA GACATGAAAA ATTTATTCCT GATGTAAATT ATACAGGAAC TTGCAAAGAC 
    TTAAGATTTG ACTATGGCCT TTTTTATGCT TCAAAGTCAT TTTTTGACTA TGCTAAGAAT 
    AGGAGAATAT TATGGGGATG GGTGGAGGAA AATGACTCTG AACAAGATGA GATTGATAAA 
    GGATGGGCTG GTTTACAGAC TATTCCAAGG AAGTTTTGGC TTGATGAAAG TGGGGAGAGA 
    TTAATGCAGT GGCCAATTGA AGAGTTAGAA AAACTTGGTG GCAATCAAAT CAATATCACT 
    GGAGAAACAC TCCAAAGTGG ATCAACTCTT GAAGTAAAAG GTATCACTGC ATCACAGGCT 
    GATGTGGAAG TTTTGTTTGG GCTACCTGAT CTACAAAGTG CTGAGCTGCT AGAACCAAGT 
    GAAACTAATC CTCAAGAACT CTGTAAAGAA CAATATGCAT CAAGAAAATG CATGATAGGG 
    CCATTTGGTT TGCAAGCCTT AGCATCAAAA GACCAGACAG AGAAGACTAC AATATCTTTC 
    CGGATATATA GAGTCGCGGA TCATTATAAA TGTTTGATGA TAAGTGACCA GACCAGGTCT 
    TCATTGAGGC AGGATCTTAA GAAACTCATA TATGCAACTA TCTTTGACAT AGATCCCAAT 
    CTCAAAACAA TTTCACTCAG AAGCCTGGTA TATTTATTTT TTATCATATT TGTGTTTATG 
    TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC11422725 ( XM_024778496.1 ) cDNA ORF clone, Medicago truncatula(barrel medic) -> XP_024634264.1 Medicago truncatula beta-fructofuranosidase, insoluble isoenzyme CWINV1 (LOC11422725), mRNA.
    Price & Availability↑
    CloneID OMe257770
    Clone ID Related Accession (Same CDS sequence) XM_024778496.1
    Accession Version XM_024778496.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1233bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-22
    Organism Medicago truncatula(barrel medic)
    Product beta-fructofuranosidase, insoluble isoenzyme CWINV1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_016407.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Medicago truncatula Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 46% of CDS bases ##RefSeq-Attributes-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGTATGGG GTCATTCTAT ATCAAATGAT CTCATAAATT GGACTCATCT AAATGATGCT 
    ATTGTACCAA CTATACCTGG TGACATAAAC AGTTGTTGGT CAGGTTCAGC CACTATACTC 
    CCAGGTGAAA AACCTGCTAT GTTGTATACA GGAATTGATC AAAATAGACA CCAAGTTCAA 
    AATTTAGCCA TGCCAAAGAA TCTGTCTGAT CCTTACTTAA GGGAATGGGA AAAACATCCT 
    CAAAATCCTT TGATGACTCC ACCTAGTGGA GTTGAAGTCG GTGAATTCCG AGATCCTTCA 
    ACTGCATGGC AAGGAAAGGA TGGAAAATGG AGGGTAATTA TTGGTGCTCA AAATGGAGAT 
    GAAGGAAAAA TTATTCTTTA CAAAAGTGAG GATTTTGTTA AGTGGATAGT GGATCCTATA 
    CCTTTCTTTG CAACAGATGA TACCGGAGTT TGTGAATGTC CGGATTTTTT TACTGTGTAT 
    ATCAATAGTA CAAATGGGGT GGATACAACT ATGGAAAATT CAAGTGAAAA ATTTATTCCT 
    GATGTAAATT ATACAGGAAC TTGCAAAGAC TTAAGATTTG ACTATGGCCT TTTTTATGCT 
    TCAAAGTCAT TTTTTGACTA TGCTAAGAAT AGGAGAATAT TATGGGGATG GGTGGAGGAA 
    AATGACTCTG AACAAGATGA GATTGATAAA GGATGGGCTG GTTTACAGAC TATTCCAAGG 
    AAGTTTTGGC TTGATGAAAG TGGGGAGAGA TTAATGCAGT GGCCAATTGA AGAGTTAGAA 
    AAACTTGGTG GCAATCAAAT CAATATCACT GGAGAAACAC TCCAAAGTGG ATCAACTCTT 
    GAAGTAAAAG GTATCACTGC ATCACAGGCT GATGTGGAAG TTTTGTTTGG GCTACCTGAT 
    CTACAAAGTG CTGAGCTGCT AGAACCAAGT GAAACTAATC CTCAAGAACT CTGTAAAGAA 
    CAATATGCAT CAAGAAAATG CATGATAGGG CCATTTGGTT TGCAAGCCTT AGCATCAAAA 
    GACCAGACAG AGAAGACTAC AATATCTTTC CGGATATATA GAGTCGCGGA TCATTATAAA 
    TGTTTGATGA TAAGTGACCA GACCAGGTCT TCATTGAGGC AGGATCTTAA GAAACTCATA 
    TATGCAACTA TCTTTGACAT AGATCCCAAT CTCAAAACAA TTTCACTCAG AAGCCTGGTA 
    TATTTATTTT TTATCATATT TGTGTTTATG TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024634264.1
    CDS1..1233
    Translation

    Target ORF information:

    RefSeq Version XM_024778496.1
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula beta-fructofuranosidase, insoluble isoenzyme CWINV1 (LOC11422725), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024778496.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGTATGGG GTCATTCTAT ATCAAATGAT CTCATAAATT GGACTCATCT AAATGATGCT 
    ATTGTACCAA CTATACCTGG TGACATAAAC AGTTGTTGGT CAGGTTCAGC CACTATACTC 
    CCAGGTGAAA AACCTGCTAT GTTGTATACA GGAATTGATC AAAATAGACA CCAAGTTCAA 
    AATTTAGCCA TGCCAAAGAA TCTGTCTGAT CCTTACTTAA GGGAATGGGA AAAACATCCT 
    CAAAATCCTT TGATGACTCC ACCTAGTGGA GTTGAAGTCG GTGAATTCCG AGATCCTTCA 
    ACTGCATGGC AAGGAAAGGA TGGAAAATGG AGGGTAATTA TTGGTGCTCA AAATGGAGAT 
    GAAGGAAAAA TTATTCTTTA CAAAAGTGAG GATTTTGTTA AGTGGATAGT GGATCCTATA 
    CCTTTCTTTG CAACAGATGA TACCGGAGTT TGTGAATGTC CGGATTTTTT TACTGTGTAT 
    ATCAATAGTA CAAATGGGGT GGATACAACT ATGGAAAATT CAAGTGAAAA ATTTATTCCT 
    GATGTAAATT ATACAGGAAC TTGCAAAGAC TTAAGATTTG ACTATGGCCT TTTTTATGCT 
    TCAAAGTCAT TTTTTGACTA TGCTAAGAAT AGGAGAATAT TATGGGGATG GGTGGAGGAA 
    AATGACTCTG AACAAGATGA GATTGATAAA GGATGGGCTG GTTTACAGAC TATTCCAAGG 
    AAGTTTTGGC TTGATGAAAG TGGGGAGAGA TTAATGCAGT GGCCAATTGA AGAGTTAGAA 
    AAACTTGGTG GCAATCAAAT CAATATCACT GGAGAAACAC TCCAAAGTGG ATCAACTCTT 
    GAAGTAAAAG GTATCACTGC ATCACAGGCT GATGTGGAAG TTTTGTTTGG GCTACCTGAT 
    CTACAAAGTG CTGAGCTGCT AGAACCAAGT GAAACTAATC CTCAAGAACT CTGTAAAGAA 
    CAATATGCAT CAAGAAAATG CATGATAGGG CCATTTGGTT TGCAAGCCTT AGCATCAAAA 
    GACCAGACAG AGAAGACTAC AATATCTTTC CGGATATATA GAGTCGCGGA TCATTATAAA 
    TGTTTGATGA TAAGTGACCA GACCAGGTCT TCATTGAGGC AGGATCTTAA GAAACTCATA 
    TATGCAACTA TCTTTGACAT AGATCCCAAT CTCAAAACAA TTTCACTCAG AAGCCTGGTA 
    TATTTATTTT TTATCATATT TGTGTTTATG TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    An improved genome release (version Mt4.0) for the model legume Medicago truncatula.
    BMC genomics15312(2014 Apr)
    Tang H,Krishnakumar V,Bidwell S,Rosen B,Chan A,Zhou S,Gentzbittel L,Childs KL,Yandell M,Gundlach H,Mayer KF,Schwartz DC,Town CD


    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature480(7378)520-4(2011 Nov)
    Young ND,Debell? F,Oldroyd GE,Geurts R,Cannon SB,Udvardi MK,Benedito VA,Mayer KF,Gouzy J,Schoof H,Van de Peer Y,Proost S,Cook DR,Meyers BC,Spannagl M,Cheung F,De Mita S,Krishnakumar V,Gundlach H,Zhou S,Mudge J,Bharti AK,Murray JD,Naoumkina MA,Rosen B,Silverstein KA,Tang H,Rombauts S,Zhao PX,Zhou P,Barbe V,Bardou P,Bechner M,Bellec A,Berger A,Berg?s H,Bidwell S,Bisseling T,Choisne N,Couloux A,Denny R,Deshpande S,Dai X,Doyle JJ,Dudez AM,Farmer AD,Fouteau S,Franken C,Gibelin C,Gish J,Goldstein S,Gonz?lez AJ,Green PJ,Hallab A,Hartog M,Hua A,Humphray SJ,Jeong DH,Jing Y,J?cker A,Kenton SM,Kim DJ,Klee K,Lai H,Lang C,Lin S,Macmil SL,Magdelenat G,Matthews L,McCorrison J,Monaghan EL,Mun JH,Najar FZ,Nicholson C,Noirot C,O'Bleness M,Paule CR,Poulain J,Prion F,Qin B,Qu C,Retzel EF,Riddle C,Sallet E,Samain S,Samson N,Sanders I,Saurat O,Scarpelli C,Schiex T,Segurens B,Severin AJ,Sherrier DJ,Shi R,Sims S,Singer SR,Sinharoy S,Sterck L,Viollet A,Wang BB,Wang K,Wang M,Wang X,Warfsmann J,Weissenbach J,White DD,White JD,Wiley GB,Wincker P,Xing Y,Yang L,Yao Z,Ying F,Zhai J,Zhou L,Zuber A,D?nari? J,Dixon RA,May GD,Schwartz DC,Rogers J,Qu?tier F,Town CD,Roe BA


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