LOC105644909 cDNA ORF clone, Jatropha curcas

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC105644909
Entrez Gene ID	105644909
Full Name	AP2-like ethylene-responsive transcription factor BBM
Gene Type	protein-coding
Organism	Jatropha curcas

mRNA and Protein(s)

mRNA	Protein	Name
XM_012230416.2	XP_012085806.1	AP2-like ethylene-responsive transcription factor BBM

Pathways from BioSystems
Gene Ontology

The following LOC105644909 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC105644909 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OJa60696	XM_012230416.2 Latest version!	Jatropha curcas AP2-like ethylene-responsive transcription factor BBM (LOC105644909), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC105644909 ( XM_012230416.2 ) cDNA ORF clone, Jatropha curcas -> XP_012085806.1 Jatropha curcas AP2-like ethylene-responsive transcription factor BBM (LOC105644909), mRNA.

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CloneID	OJa60696
Clone ID Related Accession (Same CDS sequence)	XM_012230416.2
Accession Version	XM_012230416.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2124bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-04-05
Organism	Jatropha curcas
Product	AP2-like ethylene-responsive transcription factor BBM
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012124748.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 6, 2017 this sequence version replaced XM_012230416.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Jatropha curcas Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAACAACT GGTTAGGTTT CTCTCTTTCT CCTCAACAGC TCCCATCACA ATCAGATCAT 
CATCAAGATC ACTCTCAAAC CACGGCTTCT CGCTTAGGTT TCCACTCAGA TGAAATCTCC 
GGTACCGGTG TCTCCGGAGA ATGCTTCGAT CTCACTTCAG ACTCAACTGT TCCTTCTCTC 
AACCTTCCTG CTCCTTTTGG TATACTTGAA GCTTTCAGAA ACAACCAATC TCAAGATTGG 
AATATGAAGG GTTTAAGCAT GAACCCAGAA ACTGCCTACA AAACAAACTC AGACTTGTGT 
ATGCTTATAG GTTCTTCATG CAATACTCAA AATCTTGATC AAAACCAGCA ACCCAAGCTT 
GAAAACTTTC TTGGCGGCCA TTCATTTGCC AATCATGAAA ACAAGCTTGC TACCATGTAT 
AATACTACAG GAGACTACAT GTTCCAAGAC TGCTCCTTGC AAGCAGCAAA TGATACAACC 
TGCAACGGAG AAGAAAATAA TAGTCTGAAT ACTGCTAATA ATAATAGTAA TAGCTCCATT 
GGATTATCCA TGATCAAGAC TTGGTTAAGA AATCAACCAG CACCGACACA ACAACAGCAA 
CAAGAAACCA AGAACATTAA TGGCGGTGGT GCGCAGAGTT TGTCTCTTTC TATGAGTACT 
GGAGAAGGAA ATATTAATAA TAACAGTGGT GGAGGAGATC ATAGTTCTTC TTCTGATAAT 
AACAAGCAGC AAAAAACGAC AAGCAGTGGT CTCGATAGCC AAACAGGTGC TATTGAATCA 
GTTCCCAGAA AATCTATTGA TACTTTTGGG CAAAGAACTT CTATATACCG TGGTGTAACT 
AGACATAGAT GGACGGGTAG ATATGAGGCT CATTTATGGG ATAATAGTTG CAGAAGAGAA 
GGACAAACTC GAAAGGGAAG GCAAGTTTAT TTGGGTGGTT ATGATAAAGA AGAAAAGGCA 
GCAAGAGCAT ATGATTTAGC TGCATTGAAA TACTGGGGTA CAACTACAAC TACAAATTTT 
CCAATTAGTA ACTATGAAAA AGAGTTAGAA GAAATGAAGC ACATGACCAG GCAAGAATAT 
GTTGCGTCTC TGCGAAGGAA GAGCAGTGGG TTTTCTCGTG GTGCATCCAT TTATCGAGGT 
GTAACTAGAC ACCATCAACA TGGGAGATGG CAAGCAAGAA TCGGAAGAGT TGCTGGCAAC 
AAAGACCTTT ACTTGGGAAC TTTCAGCACT CAAGAAGAAG CAGCAGAGGC ATATGACATT 
GCAGCCATAA AATTCCGAGG ATTGAACGCT GTGACCAACT TTGACATGAG CAGATATGAT 
GTTAACAGCA TCTTAGAGAG CAGCACATTG CCCATTGGAG GAGCAGCAAA GCGGTTGAAA 
GACGTAGAGC AAGCAGAAAT GATACTGGAT ACACAAAGAA CAGAAAATGA CAATATAACT 
TCACATTTTA CAGATGGTAT CAGCAGTGGC TATGGATGGC CCAGTTTGGC ATTTCAACAA 
ACACATCATC ATCATAACCA GCCATTTAGC ATGCACTATC CATATGGACA AAGACTTTGG 
TGCAAGCAAG AACAAGATTC TGATACTAAT AACCATAGCC TTCAAGATCT TCATCATCAA 
CAACTTCAAC TGGGCAATAC CCACAATTTC TTTCAGCCTT CTATTCTACA TAATCTAATG 
AGCATGGATT CTTCTTCAAT GGAACATAGT TCTGGGTCTA ACTCAGTTAT ATACAGCAAT 
GGAGGTGATG GTCAAGGAAT GAGTTATGGA AGCAATGGAA GTAGTGGGTA TGCAATTCCA 
ATGGCAACAG TTATATCCAA TAATAATAAC AATGGGAATC AAAATCAAGG GAATGGTTTT 
GGAGATGGAG AAGTGAAAGC AATTGGGTAT GATCATCAAA GTATATTTGG TTCATCAGAT 
GCTTACAATG CAAGAAACTT CTACTATCTA TCACAACAAC AATCATCATC TTCATCACCA 
GGTGCTGTGA AGGCAAGTGC ATATGATCAG GGCTCAACCT GTAACAACTG GGTGCCAACA 
GCAGTTCCTG CTCTTGCACC TAGGTCTAAC AATGTGGCTG TTTGCCATGG AGCTTCAACT 
TTCACAGTAT GGAATGATAC ATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012085806.1
CDS	250..2373
Translation	MNNWLGFSLSPQQLPSQSDHHQDHSQTTASRLGFHSDEISGTGVSGECFDLTSDSTVPSLNLPAPFGILEAFRNNQSQDWNMKGLSMNPETAYKTNSDLCMLIGSSCNTQNLDQNQQPKLENFLGGHSFANHENKLATMYNTTGDYMFQDCSLQAANDTTCNGEENNSLNTANNNSNSSIGLSMIKTWLRNQPAPTQQQQQETKNINGGGAQSLSLSMSTGEGNINNNSGGGDHSSSSDNNKQQKTTSSGLDSQTGAIESVPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPISNYEKELEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVNSILESSTLPIGGAAKRLKDVEQAEMILDTQRTENDNITSHFTDGISSGYGWPSLAFQQTHHHHNQPFSMHYPYGQRLWCKQEQDSDTNNHSLQDLHHQQLQLGNTHNFFQPSILHNLMSMDSSSMEHSSGSNSVIYSNGGDGQGMSYGSNGSSGYAIPMATVISNNNNNGNQNQGNGFGDGEVKAIGYDHQSIFGSSDAYNARNFYYLSQQQSSSSSPGAVKASAYDQGSTCNNWVPTAVPALAPRSNNVAVCHGASTFTVWNDT

Target ORF information:

RefSeq Version	XM_012230416.2
Organism	Jatropha curcas
Definition	Jatropha curcas AP2-like ethylene-responsive transcription factor BBM (LOC105644909), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012230416.2

ORF Insert Sequence:

ATGAACAACT GGTTAGGTTT CTCTCTTTCT CCTCAACAGC TCCCATCACA ATCAGATCAT 
CATCAAGATC ACTCTCAAAC CACGGCTTCT CGCTTAGGTT TCCACTCAGA TGAAATCTCC 
GGTACCGGTG TCTCCGGAGA ATGCTTCGAT CTCACTTCAG ACTCAACTGT TCCTTCTCTC 
AACCTTCCTG CTCCTTTTGG TATACTTGAA GCTTTCAGAA ACAACCAATC TCAAGATTGG 
AATATGAAGG GTTTAAGCAT GAACCCAGAA ACTGCCTACA AAACAAACTC AGACTTGTGT 
ATGCTTATAG GTTCTTCATG CAATACTCAA AATCTTGATC AAAACCAGCA ACCCAAGCTT 
GAAAACTTTC TTGGCGGCCA TTCATTTGCC AATCATGAAA ACAAGCTTGC TACCATGTAT 
AATACTACAG GAGACTACAT GTTCCAAGAC TGCTCCTTGC AAGCAGCAAA TGATACAACC 
TGCAACGGAG AAGAAAATAA TAGTCTGAAT ACTGCTAATA ATAATAGTAA TAGCTCCATT 
GGATTATCCA TGATCAAGAC TTGGTTAAGA AATCAACCAG CACCGACACA ACAACAGCAA 
CAAGAAACCA AGAACATTAA TGGCGGTGGT GCGCAGAGTT TGTCTCTTTC TATGAGTACT 
GGAGAAGGAA ATATTAATAA TAACAGTGGT GGAGGAGATC ATAGTTCTTC TTCTGATAAT 
AACAAGCAGC AAAAAACGAC AAGCAGTGGT CTCGATAGCC AAACAGGTGC TATTGAATCA 
GTTCCCAGAA AATCTATTGA TACTTTTGGG CAAAGAACTT CTATATACCG TGGTGTAACT 
AGACATAGAT GGACGGGTAG ATATGAGGCT CATTTATGGG ATAATAGTTG CAGAAGAGAA 
GGACAAACTC GAAAGGGAAG GCAAGTTTAT TTGGGTGGTT ATGATAAAGA AGAAAAGGCA 
GCAAGAGCAT ATGATTTAGC TGCATTGAAA TACTGGGGTA CAACTACAAC TACAAATTTT 
CCAATTAGTA ACTATGAAAA AGAGTTAGAA GAAATGAAGC ACATGACCAG GCAAGAATAT 
GTTGCGTCTC TGCGAAGGAA GAGCAGTGGG TTTTCTCGTG GTGCATCCAT TTATCGAGGT 
GTAACTAGAC ACCATCAACA TGGGAGATGG CAAGCAAGAA TCGGAAGAGT TGCTGGCAAC 
AAAGACCTTT ACTTGGGAAC TTTCAGCACT CAAGAAGAAG CAGCAGAGGC ATATGACATT 
GCAGCCATAA AATTCCGAGG ATTGAACGCT GTGACCAACT TTGACATGAG CAGATATGAT 
GTTAACAGCA TCTTAGAGAG CAGCACATTG CCCATTGGAG GAGCAGCAAA GCGGTTGAAA 
GACGTAGAGC AAGCAGAAAT GATACTGGAT ACACAAAGAA CAGAAAATGA CAATATAACT 
TCACATTTTA CAGATGGTAT CAGCAGTGGC TATGGATGGC CCAGTTTGGC ATTTCAACAA 
ACACATCATC ATCATAACCA GCCATTTAGC ATGCACTATC CATATGGACA AAGACTTTGG 
TGCAAGCAAG AACAAGATTC TGATACTAAT AACCATAGCC TTCAAGATCT TCATCATCAA 
CAACTTCAAC TGGGCAATAC CCACAATTTC TTTCAGCCTT CTATTCTACA TAATCTAATG 
AGCATGGATT CTTCTTCAAT GGAACATAGT TCTGGGTCTA ACTCAGTTAT ATACAGCAAT 
GGAGGTGATG GTCAAGGAAT GAGTTATGGA AGCAATGGAA GTAGTGGGTA TGCAATTCCA 
ATGGCAACAG TTATATCCAA TAATAATAAC AATGGGAATC AAAATCAAGG GAATGGTTTT 
GGAGATGGAG AAGTGAAAGC AATTGGGTAT GATCATCAAA GTATATTTGG TTCATCAGAT 
GCTTACAATG CAAGAAACTT CTACTATCTA TCACAACAAC AATCATCATC TTCATCACCA 
GGTGCTGTGA AGGCAAGTGC ATATGATCAG GGCTCAACCT GTAACAACTG GGTGCCAACA 
GCAGTTCCTG CTCTTGCACC TAGGTCTAAC AATGTGGCTG TTTGCCATGG AGCTTCAACT 
TTCACAGTAT GGAATGATAC ATAG