LOC107930486 cDNA ORF clone, Gossypium hirsutum(cotton)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC107930486
Entrez Gene ID	107930486
Full Name	polygalacturonase-like
Gene Type	protein-coding
Organism	Gossypium hirsutum(cotton)

mRNA and Protein(s)

mRNA	Protein	Name
XM_016862154.1	XP_016717643.1	probable polygalacturonase At3g15720 isoform X2
XM_016862153.1	XP_016717642.1	polygalacturonase-like isoform X1

Pathways from BioSystems
Gene Ontology

The following LOC107930486 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107930486 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OGo05134	XM_016862153.1 Latest version!	Gossypium hirsutum polygalacturonase-like (LOC107930486), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00
OGo05135	XM_016862154.1 Latest version!	Gossypium hirsutum polygalacturonase-like (LOC107930486), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC107930486 ( XM_016862153.1 ) cDNA ORF clone, Gossypium hirsutum(cotton) -> XP_016717642.1 Gossypium hirsutum polygalacturonase-like (LOC107930486), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OGo05134
Clone ID Related Accession (Same CDS sequence)	XM_016862153.1
Accession Version	XM_016862153.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1242bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-05-17
Organism	Gossypium hirsutum(cotton)
Product	polygalacturonase-like isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015962060.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Gossypium hirsutum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGGTTTAA AAATGTTGTT TTCTATTTCT TTCTTTCAAT GGGTTTTATT CGTTCAATCT 
ATGGAACCAT TTGTTTATGA CGTCAACCTT GCAGGAGCCA TTGGAGATGG AGAGAGTGAT 
GATACAGAGG CCTTCAAGAA TGCATGGAAT GTTGTCTGTA GTTCGCATAT CTCTTCAGGG 
ATATTTCGTG TTCCTTATGG ACAAAAGTTT TTGCTGCAAC CCTTGACTTT TAATGGTGAA 
TGTCGACCAA AAAACATTAC TTTTCAGATT GATGGCATAC TCATTGCCCC AAGTGATCCA 
TCTTCATGGA AATGCAAAGA AACAAACTGT AACAATTGGA TAACCTTTCA ACATTTCGAT 
GGCCTCATCA TTCAAGGAAC TGGAAGCCTC CATGGCCAAG GACAAAAATG GTGGCAAATG 
GGTTGCATGC ATAATAAAGT GCTTTGTTCT TCGCAAAAAG CAGCGAGTTT TGCCATCTTA 
GACTCTAAGA ATGTGCATAT TAGTGGCTTA ACTTCCATGG ACAGTCGAAA ATGGCATATT 
TCAATTGAAA GATCTTCATC CGTTCATGCT TCTAAACTCA ATATCAAAGC TCCAAAAGAT 
AGTCCCAACA CCGATGGCAT TCGCATCCAA CATTCCACCA ATGTTACCAT AGCCTCCTCA 
ATCATTAAGA CTGGTGATGA TTGTATAGGA ATTGGAGACG GGTCAAAATA TATTAACATT 
AATCGGATTT TTTGTGGTCC AGGTCATGGA ATTAGTATTG GAAGTCTTGG TGAAAATGGA 
AGAAGGAAGA CAGTTGAATA TGTTACTGTA AGGAGAGCTA ACTTTTATGC TACAGAGAAT 
GGTCTTAAAA TAAAGACATG GCAGGGAGGA CATGGATATG CAAGATATAT AAGATTTGAA 
CATATATCGT TTAGTAAAGT AATTAGACCT ATTATTATTG ATCAATACAC TTGCCCTCTT 
CATCAACATT GCAAGAATTA TAGTACAGCT GTGGAGATTA GCAATATCTT ATATAATGAT 
TTAAGAGGGA CAACAAACGG TGAAATTGCG GTGGAACTTT CATGCAGTAA GTCAGTTCCA 
TGCAAAAATA TCCGCATGAA AGACATACAG TTGGATTACG GAATAAATGG TAAAATGTAT 
GATGGGCACC CCAAATCTCA TTGTTTGAAT GTTGTTCAAA GTTGGGACGA AGGATATGTT 
TATCCAAATG TTCCTTGTTT AACAAAAAAA TTAAGTTACT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016717642.1
CDS	8..1249
Translation	MGLKMLFSISFFQWVLFVQSMEPFVYDVNLAGAIGDGESDDTEAFKNAWNVVCSSHISSGIFRVPYGQKFLLQPLTFNGECRPKNITFQIDGILIAPSDPSSWKCKETNCNNWITFQHFDGLIIQGTGSLHGQGQKWWQMGCMHNKVLCSSQKAASFAILDSKNVHISGLTSMDSRKWHISIERSSSVHASKLNIKAPKDSPNTDGIRIQHSTNVTIASSIIKTGDDCIGIGDGSKYININRIFCGPGHGISIGSLGENGRRKTVEYVTVRRANFYATENGLKIKTWQGGHGYARYIRFEHISFSKVIRPIIIDQYTCPLHQHCKNYSTAVEISNILYNDLRGTTNGEIAVELSCSKSVPCKNIRMKDIQLDYGINGKMYDGHPKSHCLNVVQSWDEGYVYPNVPCLTKKLSY

Target ORF information:

RefSeq Version	XM_016862153.1
Organism	Gossypium hirsutum(cotton)
Definition	Gossypium hirsutum polygalacturonase-like (LOC107930486), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016862153.1

ORF Insert Sequence:

ATGGGTTTAA AAATGTTGTT TTCTATTTCT TTCTTTCAAT GGGTTTTATT CGTTCAATCT 
ATGGAACCAT TTGTTTATGA CGTCAACCTT GCAGGAGCCA TTGGAGATGG AGAGAGTGAT 
GATACAGAGG CCTTCAAGAA TGCATGGAAT GTTGTCTGTA GTTCGCATAT CTCTTCAGGG 
ATATTTCGTG TTCCTTATGG ACAAAAGTTT TTGCTGCAAC CCTTGACTTT TAATGGTGAA 
TGTCGACCAA AAAACATTAC TTTTCAGATT GATGGCATAC TCATTGCCCC AAGTGATCCA 
TCTTCATGGA AATGCAAAGA AACAAACTGT AACAATTGGA TAACCTTTCA ACATTTCGAT 
GGCCTCATCA TTCAAGGAAC TGGAAGCCTC CATGGCCAAG GACAAAAATG GTGGCAAATG 
GGTTGCATGC ATAATAAAGT GCTTTGTTCT TCGCAAAAAG CAGCGAGTTT TGCCATCTTA 
GACTCTAAGA ATGTGCATAT TAGTGGCTTA ACTTCCATGG ACAGTCGAAA ATGGCATATT 
TCAATTGAAA GATCTTCATC CGTTCATGCT TCTAAACTCA ATATCAAAGC TCCAAAAGAT 
AGTCCCAACA CCGATGGCAT TCGCATCCAA CATTCCACCA ATGTTACCAT AGCCTCCTCA 
ATCATTAAGA CTGGTGATGA TTGTATAGGA ATTGGAGACG GGTCAAAATA TATTAACATT 
AATCGGATTT TTTGTGGTCC AGGTCATGGA ATTAGTATTG GAAGTCTTGG TGAAAATGGA 
AGAAGGAAGA CAGTTGAATA TGTTACTGTA AGGAGAGCTA ACTTTTATGC TACAGAGAAT 
GGTCTTAAAA TAAAGACATG GCAGGGAGGA CATGGATATG CAAGATATAT AAGATTTGAA 
CATATATCGT TTAGTAAAGT AATTAGACCT ATTATTATTG ATCAATACAC TTGCCCTCTT 
CATCAACATT GCAAGAATTA TAGTACAGCT GTGGAGATTA GCAATATCTT ATATAATGAT 
TTAAGAGGGA CAACAAACGG TGAAATTGCG GTGGAACTTT CATGCAGTAA GTCAGTTCCA 
TGCAAAAATA TCCGCATGAA AGACATACAG TTGGATTACG GAATAAATGG TAAAATGTAT 
GATGGGCACC CCAAATCTCA TTGTTTGAAT GTTGTTCAAA GTTGGGACGA AGGATATGTT 
TATCCAAATG TTCCTTGTTT AACAAAAAAA TTAAGTTACT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC107930486 ( XM_016862154.1 ) cDNA ORF clone, Gossypium hirsutum(cotton) -> XP_016717643.1 Gossypium hirsutum polygalacturonase-like (LOC107930486), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OGo05135
Clone ID Related Accession (Same CDS sequence)	XM_016862154.1
Accession Version	XM_016862154.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1218bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-05-17
Organism	Gossypium hirsutum(cotton)
Product	probable polygalacturonase At3g15720 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015962060.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Gossypium hirsutum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGGTTTAA AAATGTTGTT TTCTATTTCT TTCTTTCAAT GGGTTTTATT CGTTCAATCT 
ATGGAACCAT TTGTTTATGA CGTCAACCTT GCAGGAGCCA TTGGAGATGG AGAGAGTGAT 
GATACAGAGG CCTTCAAGAA TGCATGGAAT GTTGTCTGTA GTTCGCATAT CTCTTCAGGG 
ATATTTCGTG TTCCTTATGG ACAAAAGTTT TTGCTGCAAC CCTTGACTTT TAATGGTGAA 
TGTCGACCAA AAAACATTAC TTTTCAGATT GATGGCATAC TCATTGCCCC AAGTGATCCA 
TCTTCATGGA AATGCAAAGA AACAAACTGT AACAATTGGA TAACCTTTCA ACATTTCGAT 
GGCCTCATCA TTCAAGGAAC TGGAAGCCTC CATGGCCAAG GACAAAAATG GTGGCAAATG 
GGTTGCATGC ATAATAAAGT GAGTTTTGCC ATCTTAGACT CTAAGAATGT GCATATTAGT 
GGCTTAACTT CCATGGACAG TCGAAAATGG CATATTTCAA TTGAAAGATC TTCATCCGTT 
CATGCTTCTA AACTCAATAT CAAAGCTCCA AAAGATAGTC CCAACACCGA TGGCATTCGC 
ATCCAACATT CCACCAATGT TACCATAGCC TCCTCAATCA TTAAGACTGG TGATGATTGT 
ATAGGAATTG GAGACGGGTC AAAATATATT AACATTAATC GGATTTTTTG TGGTCCAGGT 
CATGGAATTA GTATTGGAAG TCTTGGTGAA AATGGAAGAA GGAAGACAGT TGAATATGTT 
ACTGTAAGGA GAGCTAACTT TTATGCTACA GAGAATGGTC TTAAAATAAA GACATGGCAG 
GGAGGACATG GATATGCAAG ATATATAAGA TTTGAACATA TATCGTTTAG TAAAGTAATT 
AGACCTATTA TTATTGATCA ATACACTTGC CCTCTTCATC AACATTGCAA GAATTATAGT 
ACAGCTGTGG AGATTAGCAA TATCTTATAT AATGATTTAA GAGGGACAAC AAACGGTGAA 
ATTGCGGTGG AACTTTCATG CAGTAAGTCA GTTCCATGCA AAAATATCCG CATGAAAGAC 
ATACAGTTGG ATTACGGAAT AAATGGTAAA ATGTATGATG GGCACCCCAA ATCTCATTGT 
TTGAATGTTG TTCAAAGTTG GGACGAAGGA TATGTTTATC CAAATGTTCC TTGTTTAACA 
AAAAAATTAA GTTACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_016717643.1
CDS	8..1225
Translation	MGLKMLFSISFFQWVLFVQSMEPFVYDVNLAGAIGDGESDDTEAFKNAWNVVCSSHISSGIFRVPYGQKFLLQPLTFNGECRPKNITFQIDGILIAPSDPSSWKCKETNCNNWITFQHFDGLIIQGTGSLHGQGQKWWQMGCMHNKVSFAILDSKNVHISGLTSMDSRKWHISIERSSSVHASKLNIKAPKDSPNTDGIRIQHSTNVTIASSIIKTGDDCIGIGDGSKYININRIFCGPGHGISIGSLGENGRRKTVEYVTVRRANFYATENGLKIKTWQGGHGYARYIRFEHISFSKVIRPIIIDQYTCPLHQHCKNYSTAVEISNILYNDLRGTTNGEIAVELSCSKSVPCKNIRMKDIQLDYGINGKMYDGHPKSHCLNVVQSWDEGYVYPNVPCLTKKLSY

Target ORF information:

RefSeq Version	XM_016862154.1
Organism	Gossypium hirsutum(cotton)
Definition	Gossypium hirsutum polygalacturonase-like (LOC107930486), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_016862154.1

ORF Insert Sequence:

ATGGGTTTAA AAATGTTGTT TTCTATTTCT TTCTTTCAAT GGGTTTTATT CGTTCAATCT 
ATGGAACCAT TTGTTTATGA CGTCAACCTT GCAGGAGCCA TTGGAGATGG AGAGAGTGAT 
GATACAGAGG CCTTCAAGAA TGCATGGAAT GTTGTCTGTA GTTCGCATAT CTCTTCAGGG 
ATATTTCGTG TTCCTTATGG ACAAAAGTTT TTGCTGCAAC CCTTGACTTT TAATGGTGAA 
TGTCGACCAA AAAACATTAC TTTTCAGATT GATGGCATAC TCATTGCCCC AAGTGATCCA 
TCTTCATGGA AATGCAAAGA AACAAACTGT AACAATTGGA TAACCTTTCA ACATTTCGAT 
GGCCTCATCA TTCAAGGAAC TGGAAGCCTC CATGGCCAAG GACAAAAATG GTGGCAAATG 
GGTTGCATGC ATAATAAAGT GAGTTTTGCC ATCTTAGACT CTAAGAATGT GCATATTAGT 
GGCTTAACTT CCATGGACAG TCGAAAATGG CATATTTCAA TTGAAAGATC TTCATCCGTT 
CATGCTTCTA AACTCAATAT CAAAGCTCCA AAAGATAGTC CCAACACCGA TGGCATTCGC 
ATCCAACATT CCACCAATGT TACCATAGCC TCCTCAATCA TTAAGACTGG TGATGATTGT 
ATAGGAATTG GAGACGGGTC AAAATATATT AACATTAATC GGATTTTTTG TGGTCCAGGT 
CATGGAATTA GTATTGGAAG TCTTGGTGAA AATGGAAGAA GGAAGACAGT TGAATATGTT 
ACTGTAAGGA GAGCTAACTT TTATGCTACA GAGAATGGTC TTAAAATAAA GACATGGCAG 
GGAGGACATG GATATGCAAG ATATATAAGA TTTGAACATA TATCGTTTAG TAAAGTAATT 
AGACCTATTA TTATTGATCA ATACACTTGC CCTCTTCATC AACATTGCAA GAATTATAGT 
ACAGCTGTGG AGATTAGCAA TATCTTATAT AATGATTTAA GAGGGACAAC AAACGGTGAA 
ATTGCGGTGG AACTTTCATG CAGTAAGTCA GTTCCATGCA AAAATATCCG CATGAAAGAC 
ATACAGTTGG ATTACGGAAT AAATGGTAAA ATGTATGATG GGCACCCCAA ATCTCATTGT 
TTGAATGTTG TTCAAAGTTG GGACGAAGGA TATGTTTATC CAAATGTTCC TTGTTTAACA 
AAAAAATTAA GTTACTAA