LOC110245338 cDNA ORF clone, Exaiptasia pallida

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC110245338
Entrez Gene ID	110245338
Full Name	acyl-CoA dehydrogenase family member 9, mitochondrial-like
Synonyms	Acad9
Gene Type	protein-coding
Organism	Exaiptasia pallida

mRNA and Protein(s)

mRNA	Protein	Name
XM_021051617.1	XP_020907276.1	acyl-CoA dehydrogenase family member 9, mitochondrial

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Developing the anemone Aiptasia as a tractable model for cnidarian-dinoflagellate symbiosis: the transcriptome of aposymbiotic A. pallida.
Lehnert EM, Burriesci MS, Pringle JR
BMC genomics13271(2012 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC110245338 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC110245338 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OEx84559	XM_021051617.1 Latest version!	Exaiptasia pallida acyl-CoA dehydrogenase family member 9, mitochondrial (LOC110245338), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC110245338 ( XM_021051617.1 ) cDNA ORF clone, Exaiptasia pallida -> XP_020907276.1 Exaiptasia pallida acyl-CoA dehydrogenase family member 9, mitochondrial (LOC110245338), mRNA.

Price & Availability↑

CloneID	OEx84559
Clone ID Related Accession (Same CDS sequence)	XM_021051617.1
Accession Version	XM_021051617.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1848bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-16
Organism	Exaiptasia pallida
Product	acyl-CoA dehydrogenase family member 9, mitochondrial
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_018386934.1) and transcript sequence (JV129305.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Exaiptasia pallida Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 246 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGGCTTCCC CAATAATGCT ATCAAGACAG TTTTTACGAG YTAGCGCCGT TTTTCGACAA 
AATCTGAACC GTCAACTTCA CATGTCSAGA GCTTGCTCTG CTGGTTTTGC CAAAGAACTT 
TTCATGGGAA GACTTAACAA AGAGAAAGTT TTTCCATATC CTGAACCATT AAACCAAGAA 
CAGAGAGATA CACTTGCCAT GTTAGTAGAC CCAGTACAAA AGTATTTTGA AGAAAAAGTT 
GATTCTACAA AAATTGACCG AGAGGCAAAT ATACCWAAAG AGGTTATGGA AGGATTAAAA 
GAGCTTGGAT TGTTTGGTCT GCAGATACCT GAAGAATATG GTGGTTTGGG TCTTATGAAC 
ACCAGCTATG CACGTGTTGC TGAAGCATTT GCCGTGGATG CAGCTATTAC GACAACGCTG 
ATGGCCCATC AGTCCATTGG WCTCAAAGGA ATCCTTATCT GTGGAAATGA TGAACAGAAG 
AAGAAATATT TACCAAAACT TGCAACAGGA GAACACATTG CAGCCTTCTG CCTCACTGAA 
CCATCAAGTG GAAGTGATGC TGCATCCATA CAAACAAGAG GGACWTTGAG CAAAGATGGT 
AAAACATTTT ATCTGAATGG ATCAAAGATA TGGATATCCA ATGGTGGATG GGCTGATGTT 
ATGACTGTAT TTGCTCAAAC AGAAGTTATT AACTCTAAGG GTGAGAAAGT GGACAAGATA 
ACAGCTTTCA TTGTCGAGAG AGCTTTCGGT GGTGTATCAA ATGGCAAACC AGAGGATAAA 
CTAGGGATTA GAGGATCTAA CACCTGTGAA GTCTTTTTTG AAGACACACC TGTTCCTATT 
GAAAATGTTC TTGGTGAAGT TGGGAGTGGA TTCAAGGTTG CTATGAATAT TCTTAACAGT 
GGCAGGTTTG GAATGGGTGC CGCTTCAGCA GGTGGACTAA GAAAACTGAT AGCTACCGCT 
GCAGAGCATG CCACCACAAG AACTCAGTTT GGCAGTAAGC TCAGCTCATT TGGTCAAATC 
CAGGAAAAAT TTGCACGTAT GTGTTTGAAT GAGTATGCTA TTGAATCCAT GTCGTACATG 
ACCAGTGGCA TGATGGATAT TGACACTGAA GATGCTTCCC TTGAGGCTGC CATGTGTAAG 
GTATATGGGT CAGAGAGTAT ATGGAGTGGT GTCAACGAAG CTCTGCAGAC CCTTGGAGGT 
CTGGGCTACA TGAAGACATA TCCCTATGAA CAACTTCTAA GAGACACTAG AATTATGCTG 
ATATATGAGG GAACCAATGA AATTCTACGG ATGTATATTG CTCTMACTGG CATGAAATAT 
GCTGGYGATC AGCTCAAAGA TGTTGTTAAG GCAATGAAGA ATCCATTCCA GAACCCAGGG 
GTACTATGGA ATGCATTACG GAAGAGAGGS CTGTACTCAC TTGGCGTGAA AGGATCATTG 
GGTGTGGCTG AAGACGTACA CCCACAATTA GCGGATTGTG TAAAGTTGCT TGAAGAGAAT 
GTCATTGACT TTGGAATGCA TTCTGAAAAA CTWCTTGCCA AGTTTGGAAA GAACATTGTC 
CATGAACAAC TGCTGCTCAA AAGGATGGCA GACACAGCTA TTAATATCTT CGCCATGACA 
GCAGTGTTGT CAAGATGCAC GCGGACACTT TACAGAGGAG GACCCGCAGC TGAACATGAA 
ACCCTTTTGA CAACCACCAT TTGTCGAGAT GCTTATGATA AAAATACACG ATTACTGAAA 
GAAGTTGCCA AAGGTTCCAA AAGAAATGGT GACAACAATG TCAAACAAAT TGCCGAAGAC 
CTATTTGCCC AAGGAGGATG TGTAGCCAAA CATGTACTTG AAGTTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_020907276.1
CDS	112..1959
Translation	MASPIMLSRQFLRnullSAVFRQNLNRQLHMnullRACSAGFAKELFMGRLNKEKVFPYPEPLNQEQRDTLAMLVDPVQKYFEEKVDSTKIDREANInullKEVMEGLKELGLFGLQIPEEYGGLGLMNTSYARVAEAFAVDAAITTTLMAHQSInullLKGILICGNDEQKKKYLPKLATGEHIAAFCLTEPSSGSDAASIQTRGnullLSKDGKTFYLNGSKIWISNGGWADVMTVFAQTEVINSKGEKVDKITAFIVERAFGGVSNGKPEDKLGIRGSNTCEVFFEDTPVPIENVLGEVGSGFKVAMNILNSGRFGMGAASAGGLRKLIATAAEHATTRTQFGSKLSSFGQIQEKFARMCLNEYAIESMSYMTSGMMDIDTEDASLEAAMCKVYGSESIWSGVNEALQTLGGLGYMKTYPYEQLLRDTRIMLIYEGTNEILRMYIAnullTGMKYAnullDQLKDVVKAMKNPFQNPGVLWNALRKRnullLYSLGVKGSLGVAEDVHPQLADCVKLLEENVIDFGMHSEKnullLAKFGKNIVHEQLLLKRMADTAINIFAMTAVLSRCTRTLYRGGPAAEHETLLTTTICRDAYDKNTRLLKEVAKGSKRNGDNNVKQIAEDLFAQGGCVAKHVLEV

Target ORF information:

RefSeq Version	XM_021051617.1
Organism	Exaiptasia pallida
Definition	Exaiptasia pallida acyl-CoA dehydrogenase family member 9, mitochondrial (LOC110245338), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_021051617.1

ORF Insert Sequence:

ATGGCTTCCC CAATAATGCT ATCAAGACAG TTTTTACGAG YTAGCGCCGT TTTTCGACAA 
AATCTGAACC GTCAACTTCA CATGTCSAGA GCTTGCTCTG CTGGTTTTGC CAAAGAACTT 
TTCATGGGAA GACTTAACAA AGAGAAAGTT TTTCCATATC CTGAACCATT AAACCAAGAA 
CAGAGAGATA CACTTGCCAT GTTAGTAGAC CCAGTACAAA AGTATTTTGA AGAAAAAGTT 
GATTCTACAA AAATTGACCG AGAGGCAAAT ATACCWAAAG AGGTTATGGA AGGATTAAAA 
GAGCTTGGAT TGTTTGGTCT GCAGATACCT GAAGAATATG GTGGTTTGGG TCTTATGAAC 
ACCAGCTATG CACGTGTTGC TGAAGCATTT GCCGTGGATG CAGCTATTAC GACAACGCTG 
ATGGCCCATC AGTCCATTGG WCTCAAAGGA ATCCTTATCT GTGGAAATGA TGAACAGAAG 
AAGAAATATT TACCAAAACT TGCAACAGGA GAACACATTG CAGCCTTCTG CCTCACTGAA 
CCATCAAGTG GAAGTGATGC TGCATCCATA CAAACAAGAG GGACWTTGAG CAAAGATGGT 
AAAACATTTT ATCTGAATGG ATCAAAGATA TGGATATCCA ATGGTGGATG GGCTGATGTT 
ATGACTGTAT TTGCTCAAAC AGAAGTTATT AACTCTAAGG GTGAGAAAGT GGACAAGATA 
ACAGCTTTCA TTGTCGAGAG AGCTTTCGGT GGTGTATCAA ATGGCAAACC AGAGGATAAA 
CTAGGGATTA GAGGATCTAA CACCTGTGAA GTCTTTTTTG AAGACACACC TGTTCCTATT 
GAAAATGTTC TTGGTGAAGT TGGGAGTGGA TTCAAGGTTG CTATGAATAT TCTTAACAGT 
GGCAGGTTTG GAATGGGTGC CGCTTCAGCA GGTGGACTAA GAAAACTGAT AGCTACCGCT 
GCAGAGCATG CCACCACAAG AACTCAGTTT GGCAGTAAGC TCAGCTCATT TGGTCAAATC 
CAGGAAAAAT TTGCACGTAT GTGTTTGAAT GAGTATGCTA TTGAATCCAT GTCGTACATG 
ACCAGTGGCA TGATGGATAT TGACACTGAA GATGCTTCCC TTGAGGCTGC CATGTGTAAG 
GTATATGGGT CAGAGAGTAT ATGGAGTGGT GTCAACGAAG CTCTGCAGAC CCTTGGAGGT 
CTGGGCTACA TGAAGACATA TCCCTATGAA CAACTTCTAA GAGACACTAG AATTATGCTG 
ATATATGAGG GAACCAATGA AATTCTACGG ATGTATATTG CTCTMACTGG CATGAAATAT 
GCTGGYGATC AGCTCAAAGA TGTTGTTAAG GCAATGAAGA ATCCATTCCA GAACCCAGGG 
GTACTATGGA ATGCATTACG GAAGAGAGGS CTGTACTCAC TTGGCGTGAA AGGATCATTG 
GGTGTGGCTG AAGACGTACA CCCACAATTA GCGGATTGTG TAAAGTTGCT TGAAGAGAAT 
GTCATTGACT TTGGAATGCA TTCTGAAAAA CTWCTTGCCA AGTTTGGAAA GAACATTGTC 
CATGAACAAC TGCTGCTCAA AAGGATGGCA GACACAGCTA TTAATATCTT CGCCATGACA 
GCAGTGTTGT CAAGATGCAC GCGGACACTT TACAGAGGAG GACCCGCAGC TGAACATGAA 
ACCCTTTTGA CAACCACCAT TTGTCGAGAT GCTTATGATA AAAATACACG ATTACTGAAA 
GAAGTTGCCA AAGGTTCCAA AAGAAATGGT GACAACAATG TCAAACAAAT TGCCGAAGAC 
CTATTTGCCC AAGGAGGATG TGTAGCCAAA CATGTACTTG AAGTTTAG