LOC109545627 cDNA ORF clone, Dendroctonus ponderosae(mountain pine beetle)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC109545627
Entrez Gene ID	109545627
Full Name	putative transcription factor SOX-15
Gene Type	protein-coding
Organism	Dendroctonus ponderosae(mountain pine beetle)

mRNA and Protein(s)

mRNA	Protein	Name
XM_019916421.1	XP_019771980.1	putative transcription factor SOX-15

Pathways from BioSystems
Gene Ontology

The following LOC109545627 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC109545627 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODe50634	XM_019916421.1 Latest version!	Dendroctonus ponderosae putative transcription factor SOX-15 (LOC109545627), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC109545627 ( XM_019916421.1 ) cDNA ORF clone, Dendroctonus ponderosae(mountain pine beetle) -> XP_019771980.1 Dendroctonus ponderosae putative transcription factor SOX-15 (LOC109545627), mRNA.

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CloneID	ODe50634
Clone ID Related Accession (Same CDS sequence)	XM_019916421.1
Accession Version	XM_019916421.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1986bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-01-09
Organism	Dendroctonus ponderosae(mountain pine beetle)
Product	putative transcription factor SOX-15
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017852382.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Dendroctonus ponderosae Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGATGGCCT CAGATGAAGA CTGCACTGGC GGTTATCCGA ATTACTCATT GATAGATGAA 
CATGCGTGCA CTCCGTCCCC ATCAGCGCAG TCCTCCCACT ACAACAGCTG CCTGTCGCCC 
TCGAACTCGC CCTCCCCCTT GTTGCAGTCC TACCAACTGA GTCGCTATTC CCAGGACTAC 
CCCAGTGGGG ACCCGCAGGA AATGATCCCC GCCAGCCAGG TGCTTCCCCA AGCGCTCCCC 
AAAGCGGGAG AAATGTGGAC AGCTGGCAAC GCCATGGACG CCTACGGGGA CTATCGGGCA 
TATGACAACC GATACGAGTA TGCGCGTCAG CAGACCTACG CAGACGCGAT GCCCGTGTAT 
GGCTCGAGGG GCGGGTTCCC GCACAAACTT GGGGGGCCCA ATCAGAGCCA AAAAGCCAGC 
AAAGAGGCGC GAATCCGGAG GCCCATGAAT GCGTTTATGG TGTGGGCAAA GGTGGAACGC 
AAGAAGCTGG CGGATGAAAA TCCCGACTTG CATAACGCGG ATCTCAGCAA AATGCTAGGG 
AAAAAGTGGC GCTCGCTCAC CCCGCAGGAT CGCCGCCCGT TTGTGGAGGA GGCTGAACGT 
CTTCGGGTGA TTCACATGAC GGAACACCCC AATTACAAGT ACCGGCCGAG GAGGAGGAAG 
CACAACAAGC AAAGAACAAC ACCGGGTGGG CCAAGGGCGG CTGGTTCTTT GCCTAGTCCG 
GGCCTGTCTA GCATGTCCCC CAGGTACCAG GGCTACGTCC CCAACGCCGG GCTTTCCCCT 
ACGGTGGCGG GATATGCGTC GCCTCTGGAC TTTCCTAGCC CGGGAGGCAG CGCCCCAGGC 
GACTACAGCC AGGACAAGAG GTACAGCCCC GATACGTACA AGTTCAGCAA CTACGCCTAC 
GCGGCCTACC AAAACTACCC GGAAAAGTCG CCCTACTCCA TTCACACGCC CGAGACTTCG 
CCCACTCATA GTCCGGAGCC GAAGCGGTCA TCGAATAGTC CCCAGGACGG CGGATCCAAA 
GAGTCGAATC AAAGTCAAGA AAAGGATACG CAACTGCCCA CGCCCGAACT GAGCCCAATG 
GGGCAACAGG ATAATCAGGA GCGCGTGTCC AGCATTCAGC ACACCAGCAA TGTGACCAGC 
AGCATGAGTA TGACGGCGCC CAATCAGCAA AGCTACACCT CCAAGGTGCA CACCTACAGG 
CAAATGAACC CCCACTACAC CAACACGCAG CCAATCACAT CAGTGCCCAT GTCCAATGGC 
ATGTACGTTA TGTGCGCCAA TAAGAGCAGC ATGGAGCAAG GCCATGTGGT GACCGGGACC 
TTCTATCCCC CAGTGGCCAC CAGTCAGGAC CAGCAACTGC TCGGCGTCAA TCAGCAAACG 
TCAATGAACA CAGTGATTGC GAACTCATCC GGCAACATTC AGTACTATCA CGGCCTGAGC 
TACTACAGCC CGCACGCTCA GAAGGAATAC GCCGCTTATG AGCAGCACGC TGCTCAGGAG 
AACAAGGATA GTTTCATCGG ATACCCACCC ATGAAACCCA TGGACAGTCT GCACGCGTAT 
CAGGAGTACG CAGCGCATCA GCACGACCAA TCGCAGCACA GCCTTGTGCA GACCTACTTG 
CCGGAAGAGC GCAGCGACGT GGACAGTGAA GTTGACGGAC AAGAGTTTGA CAAGTACCTC 
AAATATGACG GCTCGGTCAA TGACAGCAAG TACCTGGTGG GGGGGATGGA TGGGCGGAGC 
ATCGACTCGA ACCACAACTA TCATCGGAGT GAGGGCATGA GTGCGCAATC GCCGGTAGTG 
AGCAGTGCCT ATCCGTATCA GGCGAACCAT ACGAGTGTAA TCCTGCAGAC TGCGCCCACT 
ATGGTTGAAG CCGGACTTAG GCCGGAAGTG TACGATCTGG CTCCGAATGG CGTAGCTGCG 
CCGAAAAGCG AGGACGAGTT TAGTGAAATT CTGGCCGGGG TGCGAAAAAC TTGCTTCAGC 
ACGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_019771980.1
CDS	251..2236
Translation	MMASDEDCTGGYPNYSLIDEHACTPSPSAQSSHYNSCLSPSNSPSPLLQSYQLSRYSQDYPSGDPQEMIPASQVLPQALPKAGEMWTAGNAMDAYGDYRAYDNRYEYARQQTYADAMPVYGSRGGFPHKLGGPNQSQKASKEARIRRPMNAFMVWAKVERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPFVEEAERLRVIHMTEHPNYKYRPRRRKHNKQRTTPGGPRAAGSLPSPGLSSMSPRYQGYVPNAGLSPTVAGYASPLDFPSPGGSAPGDYSQDKRYSPDTYKFSNYAYAAYQNYPEKSPYSIHTPETSPTHSPEPKRSSNSPQDGGSKESNQSQEKDTQLPTPELSPMGQQDNQERVSSIQHTSNVTSSMSMTAPNQQSYTSKVHTYRQMNPHYTNTQPITSVPMSNGMYVMCANKSSMEQGHVVTGTFYPPVATSQDQQLLGVNQQTSMNTVIANSSGNIQYYHGLSYYSPHAQKEYAAYEQHAAQENKDSFIGYPPMKPMDSLHAYQEYAAHQHDQSQHSLVQTYLPEERSDVDSEVDGQEFDKYLKYDGSVNDSKYLVGGMDGRSIDSNHNYHRSEGMSAQSPVVSSAYPYQANHTSVILQTAPTMVEAGLRPEVYDLAPNGVAAPKSEDEFSEILAGVRKTCFST

Target ORF information:

RefSeq Version	XM_019916421.1
Organism	Dendroctonus ponderosae(mountain pine beetle)
Definition	Dendroctonus ponderosae putative transcription factor SOX-15 (LOC109545627), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_019916421.1

ORF Insert Sequence:

ATGATGGCCT CAGATGAAGA CTGCACTGGC GGTTATCCGA ATTACTCATT GATAGATGAA 
CATGCGTGCA CTCCGTCCCC ATCAGCGCAG TCCTCCCACT ACAACAGCTG CCTGTCGCCC 
TCGAACTCGC CCTCCCCCTT GTTGCAGTCC TACCAACTGA GTCGCTATTC CCAGGACTAC 
CCCAGTGGGG ACCCGCAGGA AATGATCCCC GCCAGCCAGG TGCTTCCCCA AGCGCTCCCC 
AAAGCGGGAG AAATGTGGAC AGCTGGCAAC GCCATGGACG CCTACGGGGA CTATCGGGCA 
TATGACAACC GATACGAGTA TGCGCGTCAG CAGACCTACG CAGACGCGAT GCCCGTGTAT 
GGCTCGAGGG GCGGGTTCCC GCACAAACTT GGGGGGCCCA ATCAGAGCCA AAAAGCCAGC 
AAAGAGGCGC GAATCCGGAG GCCCATGAAT GCGTTTATGG TGTGGGCAAA GGTGGAACGC 
AAGAAGCTGG CGGATGAAAA TCCCGACTTG CATAACGCGG ATCTCAGCAA AATGCTAGGG 
AAAAAGTGGC GCTCGCTCAC CCCGCAGGAT CGCCGCCCGT TTGTGGAGGA GGCTGAACGT 
CTTCGGGTGA TTCACATGAC GGAACACCCC AATTACAAGT ACCGGCCGAG GAGGAGGAAG 
CACAACAAGC AAAGAACAAC ACCGGGTGGG CCAAGGGCGG CTGGTTCTTT GCCTAGTCCG 
GGCCTGTCTA GCATGTCCCC CAGGTACCAG GGCTACGTCC CCAACGCCGG GCTTTCCCCT 
ACGGTGGCGG GATATGCGTC GCCTCTGGAC TTTCCTAGCC CGGGAGGCAG CGCCCCAGGC 
GACTACAGCC AGGACAAGAG GTACAGCCCC GATACGTACA AGTTCAGCAA CTACGCCTAC 
GCGGCCTACC AAAACTACCC GGAAAAGTCG CCCTACTCCA TTCACACGCC CGAGACTTCG 
CCCACTCATA GTCCGGAGCC GAAGCGGTCA TCGAATAGTC CCCAGGACGG CGGATCCAAA 
GAGTCGAATC AAAGTCAAGA AAAGGATACG CAACTGCCCA CGCCCGAACT GAGCCCAATG 
GGGCAACAGG ATAATCAGGA GCGCGTGTCC AGCATTCAGC ACACCAGCAA TGTGACCAGC 
AGCATGAGTA TGACGGCGCC CAATCAGCAA AGCTACACCT CCAAGGTGCA CACCTACAGG 
CAAATGAACC CCCACTACAC CAACACGCAG CCAATCACAT CAGTGCCCAT GTCCAATGGC 
ATGTACGTTA TGTGCGCCAA TAAGAGCAGC ATGGAGCAAG GCCATGTGGT GACCGGGACC 
TTCTATCCCC CAGTGGCCAC CAGTCAGGAC CAGCAACTGC TCGGCGTCAA TCAGCAAACG 
TCAATGAACA CAGTGATTGC GAACTCATCC GGCAACATTC AGTACTATCA CGGCCTGAGC 
TACTACAGCC CGCACGCTCA GAAGGAATAC GCCGCTTATG AGCAGCACGC TGCTCAGGAG 
AACAAGGATA GTTTCATCGG ATACCCACCC ATGAAACCCA TGGACAGTCT GCACGCGTAT 
CAGGAGTACG CAGCGCATCA GCACGACCAA TCGCAGCACA GCCTTGTGCA GACCTACTTG 
CCGGAAGAGC GCAGCGACGT GGACAGTGAA GTTGACGGAC AAGAGTTTGA CAAGTACCTC 
AAATATGACG GCTCGGTCAA TGACAGCAAG TACCTGGTGG GGGGGATGGA TGGGCGGAGC 
ATCGACTCGA ACCACAACTA TCATCGGAGT GAGGGCATGA GTGCGCAATC GCCGGTAGTG 
AGCAGTGCCT ATCCGTATCA GGCGAACCAT ACGAGTGTAA TCCTGCAGAC TGCGCCCACT 
ATGGTTGAAG CCGGACTTAG GCCGGAAGTG TACGATCTGG CTCCGAATGG CGTAGCTGCG 
CCGAAAAGCG AGGACGAGTT TAGTGAAATT CTGGCCGGGG TGCGAAAAAC TTGCTTCAGC 
ACGTGA