LOC109542537 cDNA ORF clone, Dendroctonus ponderosae(mountain pine beetle)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC109542537
Entrez Gene ID	109542537
Full Name	arf-GAP domain and FG repeat-containing protein 1
Gene Type	protein-coding
Organism	Dendroctonus ponderosae(mountain pine beetle)

mRNA and Protein(s)

mRNA	Protein	Name
XM_019911799.1	XP_019767358.1	arf-GAP domain and FG repeat-containing protein 1

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Quantitative metabolome, proteome and transcriptome analysis of midgut and fat body tissues in the mountain pine beetle, Dendroctonus ponderosae Hopkins, and insights into pheromone biosynthesis.
Keeling CI, Li M, Sandhu HK, Henderson H, Yuen MM, Bohlmann J
Insect biochemistry and molecular biology70170-83(2016 Mar)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC109542537 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC109542537 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODe47019	XM_019911799.1 Latest version!	Dendroctonus ponderosae arf-GAP domain and FG repeat-containing protein 1 (LOC109542537), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC109542537 ( XM_019911799.1 ) cDNA ORF clone, Dendroctonus ponderosae(mountain pine beetle) -> XP_019767358.1 Dendroctonus ponderosae arf-GAP domain and FG repeat-containing protein 1 (LOC109542537), mRNA.

Price & Availability↑

CloneID	ODe47019
Clone ID Related Accession (Same CDS sequence)	XM_019911799.1
Accession Version	XM_019911799.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1380bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-01-09
Organism	Dendroctonus ponderosae(mountain pine beetle)
Product	arf-GAP domain and FG repeat-containing protein 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017852296.1) and transcript sequences (GAFX01012486.1 and GDAR01006393.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Dendroctonus ponderosae Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 425 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGGCTACAG CGCGTAAAAA ATTGGACGAA CTCAACCTGA AAACCCTCCG GGAATTAGTA 
GGACTTCCTC AGAATAAGTT TTGTTTCGAT TGTGGTCAAA GGGGCCCCAC ATACGTTAAC 
GTAACTGTAG GATCCTTCGT TTGCACGAAA TGTTCTGGAA TTCTGCGCGG AATCACTCCT 
CCACACAGAG TAAAGTCAAT ATCAATGGCA ACTTTCTCCC TAGACGAAAT TGAAACCCTT 
AGAAGCAAAG GTAACGGCTT TTGCAAGAAA GTCTGGTTAG GTCTATACGA AGGTACACCG 
CCGATTTTCT CCGACGAGCA ACTAGTTAGA GATTTTATGA TAGAGAAATA CGAGAAAAAA 
AGATTCTACC TAGAAAAAAG CGAAATGAAA ACCACCATAA CTTCAGAGGT ACCAAACACA 
AAGCAATGGT CGACGGGTTC CACGAATGGC ACTAGCGCGA AACTTCAAAA TGGAACCAAG 
AACGGATTTA GTAAAATATC GACAAACCAC ATTTCTAATG GTACATTCAC TAATGGGACT 
ACAAGAAGTC GACCAGAAGT CAAGAACCAT CACCAGAACG GGACTAACAA TAATAATTTA 
GGCAATGGTT TTGCTGTTGA TTTTGATAAG GCCGAGATTT TTAACAATGC ACCCACGATC 
AGTACGAAGT TGGAAAATGG TTTTGCAGAT TTCGAACACA ACCAAGTCTA CAATGCAAAT 
AGTGATTGTA ATAATGGTAC GCCAACTCCA TCGAATCTCA ATGCTTGGGC TTCAACTTAT 
CAGACGCCGC TTAATCCTCA AAACTCCGTG AGAGGCAACT CTCACGGACC CGCCAATTAT 
ACTTCATCTA ATGAGGACAA ATATGCTGCT CTTAAGGATC TGGATAATGA AATGAAACAG 
CAGCAACATC AGGATGTCTG GTCGACTTCA ACCAATAGTT CAACAGGATC TCTGTACAGT 
TCTTCTACGC CGAATACCGG ATCAGCGTAT GGATCACCCT CCCCACAAAG CTCTATTTTT 
GGATCACCTA GTCAAGGCCA GTTTATGAGC GCTTTCAATA ATTTGCAAGA GAACAATTCG 
CAAATAGTCA ACCCATTTGG AATTAGTCAG TCTTCGTCAC CTTGGTCAGT TGGCAATGGT 
TTTAGCAACG GTTATTCGAA TGGGCCCAAT GGTTTAAGCG GAATGAACGC GTTAAATAGT 
ACACAGTCGT CCCACGGACA GATCAATCCA TTTCAGGATC AACTGGCAAA GAGCAATGGT 
TTGTCTAATG GAGTACAGTC ATTGTTTCCT AGTGATGGAA TGAAGGGAAG TTGGAGTGGA 
AACCCATTTA AGCTTGGAAC GGTTTCCTCT TCAATGAACA TCAACAACCC GTTTTTATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_019767358.1
CDS	162..1541
Translation	MATARKKLDELNLKTLRELVGLPQNKFCFDCGQRGPTYVNVTVGSFVCTKCSGILRGITPPHRVKSISMATFSLDEIETLRSKGNGFCKKVWLGLYEGTPPIFSDEQLVRDFMIEKYEKKRFYLEKSEMKTTITSEVPNTKQWSTGSTNGTSAKLQNGTKNGFSKISTNHISNGTFTNGTTRSRPEVKNHHQNGTNNNNLGNGFAVDFDKAEIFNNAPTISTKLENGFADFEHNQVYNANSDCNNGTPTPSNLNAWASTYQTPLNPQNSVRGNSHGPANYTSSNEDKYAALKDLDNEMKQQQHQDVWSTSTNSSTGSLYSSSTPNTGSAYGSPSPQSSIFGSPSQGQFMSAFNNLQENNSQIVNPFGISQSSSPWSVGNGFSNGYSNGPNGLSGMNALNSTQSSHGQINPFQDQLAKSNGLSNGVQSLFPSDGMKGSWSGNPFKLGTVSSSMNINNPFL

Target ORF information:

RefSeq Version	XM_019911799.1
Organism	Dendroctonus ponderosae(mountain pine beetle)
Definition	Dendroctonus ponderosae arf-GAP domain and FG repeat-containing protein 1 (LOC109542537), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_019911799.1

ORF Insert Sequence:

ATGGCTACAG CGCGTAAAAA ATTGGACGAA CTCAACCTGA AAACCCTCCG GGAATTAGTA 
GGACTTCCTC AGAATAAGTT TTGTTTCGAT TGTGGTCAAA GGGGCCCCAC ATACGTTAAC 
GTAACTGTAG GATCCTTCGT TTGCACGAAA TGTTCTGGAA TTCTGCGCGG AATCACTCCT 
CCACACAGAG TAAAGTCAAT ATCAATGGCA ACTTTCTCCC TAGACGAAAT TGAAACCCTT 
AGAAGCAAAG GTAACGGCTT TTGCAAGAAA GTCTGGTTAG GTCTATACGA AGGTACACCG 
CCGATTTTCT CCGACGAGCA ACTAGTTAGA GATTTTATGA TAGAGAAATA CGAGAAAAAA 
AGATTCTACC TAGAAAAAAG CGAAATGAAA ACCACCATAA CTTCAGAGGT ACCAAACACA 
AAGCAATGGT CGACGGGTTC CACGAATGGC ACTAGCGCGA AACTTCAAAA TGGAACCAAG 
AACGGATTTA GTAAAATATC GACAAACCAC ATTTCTAATG GTACATTCAC TAATGGGACT 
ACAAGAAGTC GACCAGAAGT CAAGAACCAT CACCAGAACG GGACTAACAA TAATAATTTA 
GGCAATGGTT TTGCTGTTGA TTTTGATAAG GCCGAGATTT TTAACAATGC ACCCACGATC 
AGTACGAAGT TGGAAAATGG TTTTGCAGAT TTCGAACACA ACCAAGTCTA CAATGCAAAT 
AGTGATTGTA ATAATGGTAC GCCAACTCCA TCGAATCTCA ATGCTTGGGC TTCAACTTAT 
CAGACGCCGC TTAATCCTCA AAACTCCGTG AGAGGCAACT CTCACGGACC CGCCAATTAT 
ACTTCATCTA ATGAGGACAA ATATGCTGCT CTTAAGGATC TGGATAATGA AATGAAACAG 
CAGCAACATC AGGATGTCTG GTCGACTTCA ACCAATAGTT CAACAGGATC TCTGTACAGT 
TCTTCTACGC CGAATACCGG ATCAGCGTAT GGATCACCCT CCCCACAAAG CTCTATTTTT 
GGATCACCTA GTCAAGGCCA GTTTATGAGC GCTTTCAATA ATTTGCAAGA GAACAATTCG 
CAAATAGTCA ACCCATTTGG AATTAGTCAG TCTTCGTCAC CTTGGTCAGT TGGCAATGGT 
TTTAGCAACG GTTATTCGAA TGGGCCCAAT GGTTTAAGCG GAATGAACGC GTTAAATAGT 
ACACAGTCGT CCCACGGACA GATCAATCCA TTTCAGGATC AACTGGCAAA GAGCAATGGT 
TTGTCTAATG GAGTACAGTC ATTGTTTCCT AGTGATGGAA TGAAGGGAAG TTGGAGTGGA 
AACCCATTTA AGCTTGGAAC GGTTTCCTCT TCAATGAACA TCAACAACCC GTTTTTATAA