LOC109534040 cDNA ORF clone, Dendroctonus ponderosae(mountain pine beetle)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC109534040
Entrez Gene ID	109534040
Full Name	radial spoke head protein 6 homolog A-like
Gene Type	protein-coding
Organism	Dendroctonus ponderosae(mountain pine beetle)

mRNA and Protein(s)

mRNA	Protein	Name
XM_019899587.1	XP_019755146.1	radial spoke head protein 6 homolog A-like

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Quantitative metabolome, proteome and transcriptome analysis of midgut and fat body tissues in the mountain pine beetle, Dendroctonus ponderosae Hopkins, and insights into pheromone biosynthesis.
Keeling CI, Li M, Sandhu HK, Henderson H, Yuen MM, Bohlmann J
Insect biochemistry and molecular biology70170-83(2016 Mar)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC109534040 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC109534040 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODe37479	XM_019899587.1 Latest version!	Dendroctonus ponderosae radial spoke head protein 6 homolog A-like (LOC109534040), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$342.30 $489.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC109534040 ( XM_019899587.1 ) cDNA ORF clone, Dendroctonus ponderosae(mountain pine beetle) -> XP_019755146.1 Dendroctonus ponderosae radial spoke head protein 6 homolog A-like (LOC109534040), mRNA.

Price & Availability↑

CloneID	ODe37479
Clone ID Related Accession (Same CDS sequence)	XM_019899587.1
Accession Version	XM_019899587.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1740bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-01-09
Organism	Dendroctonus ponderosae(mountain pine beetle)
Product	radial spoke head protein 6 homolog A-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017851686.1) and transcript sequence (GDAR01012960.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Dendroctonus ponderosae Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 1137 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

ATGCTGTTCG GCTACTCGGT CACGCAAAAT GCCGGCGAAG CGGCGGAAGA GCTGCCGAAC 
AACGAGGCGG AATTCTTCAA CGCCAAGACT TTCCTGCAAA CGGCCAGCGG CAACACCGGC 
GACAACCTCT ACGACCACCT GACCGAGGTG CTCAACCGGA TCCTGGCGGA GCGGCCCGAG 
AATGTGATCG ACTTCTTCGA GGAGTACAGC CGCAAGGTGA AGGAGCGCCG CTACCGCCCG 
CTGACCGACC GTTTGGAGGA CTGCTACATC ACGCCCGCCG CCTTCGAGCT CGCCTCCCAC 
ATGCTGAGGG CGCTGCGCCC GCTGCCAGCC CCCGCCCCCT CCACCTTGGA CCCGGAGGAC 
CTGGAGCTGG CCGACATGTC CAGGAACAAC CTGCTGGAGA TGCTCTTCTA TCTGGAACAG 
GCGGGGCTGG GCCTGCCCCG GCCGGAGATG GTCTTTGTCA TGCTGTCCAT GAGGCAGCTG 
GTGGCGGCCA AGCCGATCGC CTCCATCCGC TTCTGGGGGA AGGTCCTGGG GACCTTCCAG 
AACTACCTGG TGCTGGAGGC GGAGCTGAAG GAGGAGGAGT ATGTGCGGCG GAACGAGGAG 
TTTGCGGAGC AAACCGCCCA GCTGCCCAGC GCCCCGATGA GCCAGCTGGA CGAGGCGCTG 
GCCCACCTGT CCCTGGCGGG AGAAGGGGCA ACTTCCAAAG TCCCCAGGGC CCTGCCGGCG 
GAGCCCCAGA TCCACTTCCT GCCTCCGGCG GAGGCCCCCA TGGAGCCCTC GGGCGTGGGC 
CTCAACAAGA AGGCCTACTT CGTGTGCCCC GGGATAGGGG AGCCCTGGAC CGAGCTGCCG 
GACGTCTCCC CACAACAGAT CCGAGTGGCG CGCCAGATCC ACAAGGCCTT CAGCGGACGG 
TTGGACACGC CCATCCAGAC CCACCCAGAG TTCCCCGGCC AGGAGAGGCA CCTGCTCAGG 
GCGCAGATTG CCAGGATCTC CTCGGCCACC CTGGTGGCCC CTCTGGGGTT CTACACCTTC 
GGCGCAGAGG AGCTGGGGGA GGGCGCCGAA GAGGAGGAGG AGGAGGCAGC AGGTGGGGAG 
CCGAAAACCG TCTACAGCCC CAACCCCCAC TACCAGCCCC CCGCCCTGAA GGATCTCCTG 
GACTCGTCCA TGTCGTTCTG GGTGCACACG GCGCCCTACA TTCTGCCGCA AGGCAGGACC 
AGCTGGTGGA ACCCCGGGCC CGACCTGGAG GGCGCGGGCG ATGAGGAGGA CGAGGGCGAG 
CAACTGGGCG AGGAGGAGCA GGAGGAGGAG CCGAAAGCCA CGCGGGTGGA GCCGGAAAGC 
GGGCCGCCCC TTCTCACGCC CCTCTCGGAG GACGCCTCCC TGGAGACCAC CAATCCGTGG 
ACGGTGCGCC CCACCGCCAG CGTTCTGGAC ATGTTCTCCT TGGCGGTGGT GCGCTCCAAC 
CTGTGGCCTG GCGGCCACGC CCTTGCCACG CCCACCAGCG GCTTCTACAA CGTCTACATA 
GGCGACGGGC TGAAGTACAT GCAGACCAAC TTCACGCCGC TGCCTCTGCC TGCTGTGCAG 
CAGGAGTATC CGGTGGGGCC GGAGGTTCTG GAGGTGTTGG ACCCGTCCGG GCAGGAGGAG 
GAGCAGTGGC GCATCGACCA CTTGCCCAAG CCGAAACCGC AGCTGGGAGA GGGAGGCGAG 
GAGGCCGAGC CCGAGCAGGA GGAGGAGGAG GAGGATGAGG AAGAGGACGA CGAGGACTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_019755146.1
CDS	23..1762
Translation	MLFGYSVTQNAGEAAEELPNNEAEFFNAKTFLQTASGNTGDNLYDHLTEVLNRILAERPENVIDFFEEYSRKVKERRYRPLTDRLEDCYITPAAFELASHMLRALRPLPAPAPSTLDPEDLELADMSRNNLLEMLFYLEQAGLGLPRPEMVFVMLSMRQLVAAKPIASIRFWGKVLGTFQNYLVLEAELKEEEYVRRNEEFAEQTAQLPSAPMSQLDEALAHLSLAGEGATSKVPRALPAEPQIHFLPPAEAPMEPSGVGLNKKAYFVCPGIGEPWTELPDVSPQQIRVARQIHKAFSGRLDTPIQTHPEFPGQERHLLRAQIARISSATLVAPLGFYTFGAEELGEGAEEEEEEAAGGEPKTVYSPNPHYQPPALKDLLDSSMSFWVHTAPYILPQGRTSWWNPGPDLEGAGDEEDEGEQLGEEEQEEEPKATRVEPESGPPLLTPLSEDASLETTNPWTVRPTASVLDMFSLAVVRSNLWPGGHALATPTSGFYNVYIGDGLKYMQTNFTPLPLPAVQQEYPVGPEVLEVLDPSGQEEEQWRIDHLPKPKPQLGEGGEEAEPEQEEEEEDEEEDDED

Target ORF information:

RefSeq Version	XM_019899587.1
Organism	Dendroctonus ponderosae(mountain pine beetle)
Definition	Dendroctonus ponderosae radial spoke head protein 6 homolog A-like (LOC109534040), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_019899587.1

ORF Insert Sequence:

ATGCTGTTCG GCTACTCGGT CACGCAAAAT GCCGGCGAAG CGGCGGAAGA GCTGCCGAAC 
AACGAGGCGG AATTCTTCAA CGCCAAGACT TTCCTGCAAA CGGCCAGCGG CAACACCGGC 
GACAACCTCT ACGACCACCT GACCGAGGTG CTCAACCGGA TCCTGGCGGA GCGGCCCGAG 
AATGTGATCG ACTTCTTCGA GGAGTACAGC CGCAAGGTGA AGGAGCGCCG CTACCGCCCG 
CTGACCGACC GTTTGGAGGA CTGCTACATC ACGCCCGCCG CCTTCGAGCT CGCCTCCCAC 
ATGCTGAGGG CGCTGCGCCC GCTGCCAGCC CCCGCCCCCT CCACCTTGGA CCCGGAGGAC 
CTGGAGCTGG CCGACATGTC CAGGAACAAC CTGCTGGAGA TGCTCTTCTA TCTGGAACAG 
GCGGGGCTGG GCCTGCCCCG GCCGGAGATG GTCTTTGTCA TGCTGTCCAT GAGGCAGCTG 
GTGGCGGCCA AGCCGATCGC CTCCATCCGC TTCTGGGGGA AGGTCCTGGG GACCTTCCAG 
AACTACCTGG TGCTGGAGGC GGAGCTGAAG GAGGAGGAGT ATGTGCGGCG GAACGAGGAG 
TTTGCGGAGC AAACCGCCCA GCTGCCCAGC GCCCCGATGA GCCAGCTGGA CGAGGCGCTG 
GCCCACCTGT CCCTGGCGGG AGAAGGGGCA ACTTCCAAAG TCCCCAGGGC CCTGCCGGCG 
GAGCCCCAGA TCCACTTCCT GCCTCCGGCG GAGGCCCCCA TGGAGCCCTC GGGCGTGGGC 
CTCAACAAGA AGGCCTACTT CGTGTGCCCC GGGATAGGGG AGCCCTGGAC CGAGCTGCCG 
GACGTCTCCC CACAACAGAT CCGAGTGGCG CGCCAGATCC ACAAGGCCTT CAGCGGACGG 
TTGGACACGC CCATCCAGAC CCACCCAGAG TTCCCCGGCC AGGAGAGGCA CCTGCTCAGG 
GCGCAGATTG CCAGGATCTC CTCGGCCACC CTGGTGGCCC CTCTGGGGTT CTACACCTTC 
GGCGCAGAGG AGCTGGGGGA GGGCGCCGAA GAGGAGGAGG AGGAGGCAGC AGGTGGGGAG 
CCGAAAACCG TCTACAGCCC CAACCCCCAC TACCAGCCCC CCGCCCTGAA GGATCTCCTG 
GACTCGTCCA TGTCGTTCTG GGTGCACACG GCGCCCTACA TTCTGCCGCA AGGCAGGACC 
AGCTGGTGGA ACCCCGGGCC CGACCTGGAG GGCGCGGGCG ATGAGGAGGA CGAGGGCGAG 
CAACTGGGCG AGGAGGAGCA GGAGGAGGAG CCGAAAGCCA CGCGGGTGGA GCCGGAAAGC 
GGGCCGCCCC TTCTCACGCC CCTCTCGGAG GACGCCTCCC TGGAGACCAC CAATCCGTGG 
ACGGTGCGCC CCACCGCCAG CGTTCTGGAC ATGTTCTCCT TGGCGGTGGT GCGCTCCAAC 
CTGTGGCCTG GCGGCCACGC CCTTGCCACG CCCACCAGCG GCTTCTACAA CGTCTACATA 
GGCGACGGGC TGAAGTACAT GCAGACCAAC TTCACGCCGC TGCCTCTGCC TGCTGTGCAG 
CAGGAGTATC CGGTGGGGCC GGAGGTTCTG GAGGTGTTGG ACCCGTCCGG GCAGGAGGAG 
GAGCAGTGGC GCATCGACCA CTTGCCCAAG CCGAAACCGC AGCTGGGAGA GGGAGGCGAG 
GAGGCCGAGC CCGAGCAGGA GGAGGAGGAG GAGGATGAGG AAGAGGACGA CGAGGACTAG