ciao1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	ciao1
Entrez Gene ID	795104
Full Name	cytosolic iron-sulfur assembly component 1
Synonyms	wdr39,zgc:55911,zgc:77394
General protein information	Preferred Names cytosolic iron-sulfur assembly component 1 Names probable cytosolic iron-sulfur protein assembly protein ciao1 WD repeat domain 39 cytosolic iron-sulfur protein assembly 1 homolog
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_200147.2	NP_956441.2	probable cytosolic iron-sulfur protein assembly protein ciao1

Pathways from BioSystems

Homologies

Homo sapiens (human)	CIAO1	NP_004795.1
	CIAO1	XP_001098395.1
Bos taurus (cattle)	CIAO1	NP_001032559.1
Kluyveromyces lactis	KLLA0E21781g	XP_454937.1
Eremothecium gossypii	AGOS_ACR091W	NP_983493.1
Danio rerio (zebrafish)	ciao1	NP_956441.2
Drosophila melanogaster (fruit fly)	Ciao1	NP_610996.1
Anopheles gambiae (African malaria mosquito)	CIAO1_ANOGA	XP_310648.3
Saccharomyces cerevisiae (baker's yeast)	CIA1	NP_010553.3
Neurospora crassa	NCU05426	XP_963249.1
Xenopus tropicalis (tropical clawed frog)	ciao1	NP_001016887.1
Canis lupus familiaris (dog)	CIAO1	XP_532950.2
Arabidopsis thaliana (thale cress)	AT4G32990	NP_195025.5
Mus musculus (house mouse)	Ciao1	NP_079572.2
Rattus norvegicus (Norway rat)	Ciao1	NP_001008766.1
Oryza sativa (rice)	Os07g0252000	NP_001059302.1
Pan troglodytes (chimpanzee)	CIAO1	XP_001144741.2
Gallus gallus (chicken)	CIAO1	XP_423992.4
Caenorhabditis elegans (roundworm)	CELE_Y18D10A.9	NP_493247.2
Magnaporthe oryzae (rice blast fungus)	MGG_03150	XP_003716845.1
Arabidopsis thaliana (thale cress)	emb1345	NP_565615.1

Gene Ontology
Bibliography

Related articles in PubMed

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Many genes in fish have species-specific asymmetric rates of molecular evolution.
Steinke D, Salzburger W, Braasch I, Meyer A
BMC genomics720(2006 Feb)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following ciao1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ciao1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa02525	NM_200147.2 Latest version!	Danio rerio cytosolic iron-sulfur assembly component 1 (ciao1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

ciao1 ( NM_200147.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_956441.2 Danio rerio cytosolic iron-sulfur assembly component 1 (ciao1), mRNA.

Price & Availability↑

CloneID	ODa02525
Clone ID Related Accession (Same CDS sequence)	NM_200147.2
Accession Version	NM_200147.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 993bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	probable cytosolic iron-sulfur protein assembly protein ciao1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC065658.1. On or before Jan 24, 2008 this sequence version replaced XM_001332755.1, XM_001332841.1, NM_200147.1. ##Evidence-Data-START## Transcript exon combination :: BC065658.1, BC044534.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGAAGGGCG CGCTGGAGCT ACAGCACAGG GTGAGCGCGC ACCCGGACTC GCGCTGCTGG 
TACGTCGCGT GGAATCCCGC GGGCACGACG CTCGCCACCT GCGGCGGAGA CCGCGCAATA 
AGAATATGGG GCAAAGAAGG GGACAGTTGG GAATGTAAGT GTGTCCTTTC TGATGGACAC 
CAGCGCACAG TCAGAAAAGT AGCCTGGTCT CCCTGTGGGA AATACCTGGC TTCAGCCAGC 
TTTGATGCCA CAACATGCAT CTGGAAGAAG ACGGATGAGG ATTTTGAGTG CCTGACGGTG 
TTAGAAGGTC ATGAGAATGA GGTGAAATGT GTAGCTTGGG CTCCATCTGG AAGCTTACTG 
GCCACCTGCA GCAGAGACAA AAGCGTTTGG ATTTGGGAAG TGGATGAGGA GGACGAATAC 
GAGTGTTTAA GTGTTGTGAA TTCACACACG CAGGACGTAA AACATGTCGT CTGGCACCCG 
ACGCAGGAGC TTCTCGCATC AGCCAGTTAC GACAACAAGA TCTGTATTTA TAAAGAGGAA 
GATGATGACT GGGAATGCAG AGCCACGCTA GAAGGACATG AATCCACTGT CTGGAGTTTG 
ACCTTTGACC CTGAGGGACG GAGATTGGCT TCTTGTAGCG ACGATCGAAC CGTAAAGATC 
TGGAAAGAGT CGACAACTGG AGATGGTTCT TCGGATGAGT CCTGGAAGTG TATATGCACC 
TTGTCTGGAT TCCATGGGAG AACAATATAT GATATTGCAT GGTGTCGCCT GACCGGTGCT 
TTAGCCACCG CATGTGGTGA TGATGGAGTG CGTGTGTTCA GTGAAGACCC CACTGCTGAC 
CCAGAGCAGC CCATCTTCGC CCTGTCAGCC CACGTGCCCA AAGCCCACAA TCAGGACGTC 
AACTGCGTGT CCTGGAACCC GAAAGAAGCA GGACTTCTAG CCACATGCAG CGACAACGGA 
GAGTTCGCCA TCTGGAAATA CAACTCTGCC TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_956441.2
CDS	110..1102
Translation	MKGALELQHRVSAHPDSRCWYVAWNPAGTTLATCGGDRAIRIWGKEGDSWECKCVLSDGHQRTVRKVAWSPCGKYLASASFDATTCIWKKTDEDFECLTVLEGHENEVKCVAWAPSGSLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQELLASASYDNKICIYKEEDDDWECRATLEGHESTVWSLTFDPEGRRLASCSDDRTVKIWKESTTGDGSSDESWKCICTLSGFHGRTIYDIAWCRLTGALATACGDDGVRVFSEDPTADPEQPIFALSAHVPKAHNQDVNCVSWNPKEAGLLATCSDNGEFAIWKYNSA

Target ORF information:

RefSeq Version	NM_200147.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio cytosolic iron-sulfur assembly component 1 (ciao1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_200147.2

ORF Insert Sequence:

ATGAAGGGCG CGCTGGAGCT ACAGCACAGG GTGAGCGCGC ACCCGGACTC GCGCTGCTGG 
TACGTCGCGT GGAATCCCGC GGGCACGACG CTCGCCACCT GCGGCGGAGA CCGCGCAATA 
AGAATATGGG GCAAAGAAGG GGACAGTTGG GAATGTAAGT GTGTCCTTTC TGATGGACAC 
CAGCGCACAG TCAGAAAAGT AGCCTGGTCT CCCTGTGGGA AATACCTGGC TTCAGCCAGC 
TTTGATGCCA CAACATGCAT CTGGAAGAAG ACGGATGAGG ATTTTGAGTG CCTGACGGTG 
TTAGAAGGTC ATGAGAATGA GGTGAAATGT GTAGCTTGGG CTCCATCTGG AAGCTTACTG 
GCCACCTGCA GCAGAGACAA AAGCGTTTGG ATTTGGGAAG TGGATGAGGA GGACGAATAC 
GAGTGTTTAA GTGTTGTGAA TTCACACACG CAGGACGTAA AACATGTCGT CTGGCACCCG 
ACGCAGGAGC TTCTCGCATC AGCCAGTTAC GACAACAAGA TCTGTATTTA TAAAGAGGAA 
GATGATGACT GGGAATGCAG AGCCACGCTA GAAGGACATG AATCCACTGT CTGGAGTTTG 
ACCTTTGACC CTGAGGGACG GAGATTGGCT TCTTGTAGCG ACGATCGAAC CGTAAAGATC 
TGGAAAGAGT CGACAACTGG AGATGGTTCT TCGGATGAGT CCTGGAAGTG TATATGCACC 
TTGTCTGGAT TCCATGGGAG AACAATATAT GATATTGCAT GGTGTCGCCT GACCGGTGCT 
TTAGCCACCG CATGTGGTGA TGATGGAGTG CGTGTGTTCA GTGAAGACCC CACTGCTGAC 
CCAGAGCAGC CCATCTTCGC CCTGTCAGCC CACGTGCCCA AAGCCCACAA TCAGGACGTC 
AACTGCGTGT CCTGGAACCC GAAAGAAGCA GGACTTCTAG CCACATGCAG CGACAACGGA 
GAGTTCGCCA TCTGGAAATA CAACTCTGCC TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Many genes in fish have species-specific asymmetric rates of molecular evolution.
BMC genomics720(2006 Feb)
Steinke D,Salzburger W,Braasch I,Meyer A