rab40c cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	rab40c
Entrez Gene ID	678600
Full Name	RAB40c, member RAS oncogene family
Synonyms	cb453,wu:fk50d06,zgc:136966
General protein information	Preferred Names RAB40c, member RAS oncogene family Names ras-related protein Rab-40C
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001040348.1	NP_001035438.1	ras-related protein Rab-40C

Pathways from BioSystems

Homologies

Rattus norvegicus (Norway rat)	Rab40c	NP_872616.1
Pan troglodytes (chimpanzee)	RAB40C	XP_003314936.1
Canis lupus familiaris (dog)	RAB40C	XP_005622162.1
Bos taurus (cattle)	RAB40C	NP_001075014.1
Mus musculus (house mouse)	Rab40c	NP_631893.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP000841	XP_316810.5
Gallus gallus (chicken)	RAB40C	NP_001166133.1
Drosophila melanogaster (fruit fly)	Rab40	NP_727611.1
Homo sapiens (human)	RAB40C	NP_066991.3
Xenopus tropicalis (tropical clawed frog)	rab40c	XP_004918048.1
Danio rerio (zebrafish)	rab40c	NP_001035438.1

Gene Ontology
Bibliography

Related articles in PubMed

A plasmid library of full-length zebrafish rab proteins for
Hall TE, Martel N, Lo HP, Xiong Z, Parton RG
Cellular logistics7(1)e1301151(2017)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Disruption of RAB40AL function leads to Martin--Probst syndrome, a rare X-linked multisystem neurodevelopmental human disorder.
Bedoyan JK, Schaibley VM, Peng W, Bai Y, Mondal K, Shetty AC, Durham M, Micucci JA, Dhiraaj A, Skidmore JM, Kaplan JB, Skinner C, Schwartz CE, Antonellis A, Zwick ME, Cavalcoli JD, Li JZ, Martin DM
Journal of medical genetics49(5)332-40(2012 May)

Transcriptional enhancers in protein-coding exons of vertebrate developmental genes.
Ritter DI, Dong Z, Guo S, Chuang JH
PloS one7(5)e35202(2012)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following rab40c gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the rab40c cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa34221	NM_001040348.1 Latest version!	Danio rerio RAB40c, member RAS oncogene family (rab40c), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

rab40c ( NM_001040348.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001035438.1 Danio rerio RAB40c, member RAS oncogene family (rab40c), mRNA.

Price & Availability↑

CloneID	ODa34221
Clone ID Related Accession (Same CDS sequence)	NM_001040348.1
Accession Version	NM_001040348.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 840bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	ras-related protein Rab-40C
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC115347.1. ##Evidence-Data-START## Transcript exon combination :: BC115347.1, EB958004.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGGGCACCC AGGGAAGCCC TGTGAAGAGC TACGACTACC TGCTCAAGTT CCTCCTGGTC 
GGAGACAGCG ACGTGGGCAA GGGAGAGATC CTGGATAGCC TTCAAGACGG ATCTGCTGAG 
TCTCCATATG CCTACAGCAG CGGAATCGAC TACAAGACAA CCACGATCCT GTTGGATGGA 
CGGAGAGTTA AACTAGAGCT TTGGGACACT TCGGGACAAG GCAGGTTTTG CACCATTTTC 
AGGTCGTACT CCAGGGGAGC GCAGGGGATC TTGTTGGTGT ATGACATCAC CAACCGCTGG 
TCATTTGATG GGATAGACCG CTGGATCAGG GAGATTGATG AGCATGCACC TGGAGTGCCC 
CGTATTCTAG TGGGTAACCG GCTACACCTG GCGTTCAAGC GACAGGTTCC CACAGAACAG 
GCACGGGCAT ACGCAGAAAA GAATGGCATG ACATTTTTTG AAGTGAGTCC TCTCTGCAAC 
TTCAACGTCA TCGAGTCCTT TACAGAGCTC TCGCGCATCG TCCTGATGAG GCATGGGATG 
GAGAAGTTCT GGAGGCCCAA CAGAGTATTC AGTCTGCAGG ACTTGTGCTG CCGTGCCATT 
GTTTCCTGCA CCCCTGTGCA CCTAATCGAT AAGCTGCCAC TTCCTGTGGC CATCAAGAGC 
CATTTGAAGT CATTCTCCAT GGCGAACGGC ATGAATGCTG TCATGATGCA CGGCCGCTCG 
TATTCGCTGG CCAATGCCGC CGGAGGCAGC AAAGGTAACA GTCTTAAACG CTCCAAATCC 
ATCCGGCCGC CACAAAGTCC ACCACAGAAC TGCACCAGGA ACAACTGTAA GATCTCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001035438.1
CDS	100..939
Translation	MGTQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYAYSSGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKFWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMMHGRSYSLANAAGGSKGNSLKRSKSIRPPQSPPQNCTRNNCKIS

Target ORF information:

RefSeq Version	NM_001040348.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio RAB40c, member RAS oncogene family (rab40c), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001040348.1

ORF Insert Sequence:

ATGGGCACCC AGGGAAGCCC TGTGAAGAGC TACGACTACC TGCTCAAGTT CCTCCTGGTC 
GGAGACAGCG ACGTGGGCAA GGGAGAGATC CTGGATAGCC TTCAAGACGG ATCTGCTGAG 
TCTCCATATG CCTACAGCAG CGGAATCGAC TACAAGACAA CCACGATCCT GTTGGATGGA 
CGGAGAGTTA AACTAGAGCT TTGGGACACT TCGGGACAAG GCAGGTTTTG CACCATTTTC 
AGGTCGTACT CCAGGGGAGC GCAGGGGATC TTGTTGGTGT ATGACATCAC CAACCGCTGG 
TCATTTGATG GGATAGACCG CTGGATCAGG GAGATTGATG AGCATGCACC TGGAGTGCCC 
CGTATTCTAG TGGGTAACCG GCTACACCTG GCGTTCAAGC GACAGGTTCC CACAGAACAG 
GCACGGGCAT ACGCAGAAAA GAATGGCATG ACATTTTTTG AAGTGAGTCC TCTCTGCAAC 
TTCAACGTCA TCGAGTCCTT TACAGAGCTC TCGCGCATCG TCCTGATGAG GCATGGGATG 
GAGAAGTTCT GGAGGCCCAA CAGAGTATTC AGTCTGCAGG ACTTGTGCTG CCGTGCCATT 
GTTTCCTGCA CCCCTGTGCA CCTAATCGAT AAGCTGCCAC TTCCTGTGGC CATCAAGAGC 
CATTTGAAGT CATTCTCCAT GGCGAACGGC ATGAATGCTG TCATGATGCA CGGCCGCTCG 
TATTCGCTGG CCAATGCCGC CGGAGGCAGC AAAGGTAACA GTCTTAAACG CTCCAAATCC 
ATCCGGCCGC CACAAAGTCC ACCACAGAAC TGCACCAGGA ACAACTGTAA GATCTCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A plasmid library of full-length zebrafish rab proteins for
Cellular logistics7(1)e1301151(2017)
Hall TE,Martel N,Lo HP,Xiong Z,Parton RG

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Disruption of RAB40AL function leads to Martin--Probst syndrome, a rare X-linked multisystem neurodevelopmental human disorder.
Journal of medical genetics49(5)332-40(2012 May)
Bedoyan JK,Schaibley VM,Peng W,Bai Y,Mondal K,Shetty AC,Durham M,Micucci JA,Dhiraaj A,Skidmore JM,Kaplan JB,Skinner C,Schwartz CE,Antonellis A,Zwick ME,Cavalcoli JD,Li JZ,Martin DM

Transcriptional enhancers in protein-coding exons of vertebrate developmental genes.
PloS one7(5)e35202(2012)
Ritter DI,Dong Z,Guo S,Chuang JH