lpp cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	lpp
Entrez Gene ID	573024
Full Name	LIM domain containing preferred translocation partner in lipoma
Synonyms	fc26e09,wu:fc26e09,zgc:56152
General protein information	Preferred Names LIM domain containing preferred translocation partner in lipoma Names lipoma-preferred partner
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_201198.1	NP_957492.1	lipoma-preferred partner

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	LPP	XP_001159438.1
Mus musculus (house mouse)	Lpp	NP_848780.3
Gallus gallus (chicken)	LPP	NP_001026738.1
Danio rerio (zebrafish)	lpp	NP_957492.1
Xenopus tropicalis (tropical clawed frog)	lpp	NP_001107348.1
Homo sapiens (human)	LPP	NP_005569.1
Canis lupus familiaris (dog)	LPP	XP_005639875.1
Bos taurus (cattle)	LPP	NP_001179520.1
Rattus norvegicus (Norway rat)	Lpp	NP_001013886.1

Gene Ontology
Bibliography

Related articles in PubMed

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Rbfox-regulated alternative splicing is critical for zebrafish cardiac and skeletal muscle functions.
Gallagher TL, Arribere JA, Geurts PA, Exner CR, McDonald KL, Dill KK, Marr HL, Adkar SS, Garnett AT, Amacher SL, Conboy JG
Developmental biology359(2)251-61(2011 Nov)

Comprehensive profiling of zebrafish hepatic proximal promoter CpG island methylation and its modification during chemical carcinogenesis.
Mirbahai L, Williams TD, Zhan H, Gong Z, Chipman JK
BMC genomics123(2011 Jan)

Lpp is involved in Wnt/PCP signaling and acts together with Scrib to mediate convergence and extension movements during zebrafish gastrulation.
Vervenne HB, Crombez KR, Lambaerts K, Carvalho L, K?ppen M, Heisenberg CP, Van de Ven WJ, Petit MM
Developmental biology320(1)267-77(2008 Aug)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Lpp interacts with the PCP protein Scrib in zebrafish, and that Lpp and Scrib cooperate for the mediation of convergence and extension.
Title: Lpp is involved in Wnt/PCP signaling and acts together with Scrib to mediate convergence and extension movements during zebrafish gastrulation.

The following lpp gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the lpp cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa30479	NM_201198.1 Latest version!	Danio rerio LIM domain containing preferred translocation partner in lipoma (lpp), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

lpp ( NM_201198.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_957492.1 Danio rerio LIM domain containing preferred translocation partner in lipoma (lpp), mRNA.

Price & Availability↑

CloneID	ODa30479
Clone ID Related Accession (Same CDS sequence)	NM_201198.1
Accession Version	NM_201198.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1671bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-08-10
Organism	Danio rerio(zebrafish)
Product	lipoma-preferred partner
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC050503.1. On Dec 21, 2007 this sequence version replaced XM_684073.2. ##Evidence-Data-START## Transcript exon combination :: BC050503.1, BC171497.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705, SAMN06350654 [ECO:0000348] ##Evidence-Data-END##

ATGTGGGGCG GACATAATGA TGGTGACCAG CAAGGTCATG TGAGTGCTCG AATGGAGACC 
AGCTTACCCA TGGGTACAAC CAGCATTTCT ATATCCCAGC AGCAGGCTCC GAAAAAGTTT 
GCCCCTGTTG TGGCTCCCAA ACCCAAGTTC AACCCTTATA AACAACCCGG GGATGCAACA 
CACGAGGGTG ACTATCCTCC ACCTCCTCCA CCTGTGGTTG ACCCCAGTGG GCTGCCCTCC 
CCTTCTAGCT TCCCACCTCC TCCACCCATG GATGAGACTT CTCTTGGCTT TCAGATAAAA 
GGACCTGAGA AAACTCTAGA AGAGAGACGC TCCAGTCTGG ATGCTGAGAT TGATTCGCTG 
ACCAGTATCC TGGCTGACCT AGAGAGCAGT TCACCTTATA AACCGCGCAC ACAGCAGAAT 
TCTGCCAGTC CTGCTGCAAC AGGCTCTACC GCCCCTGTTA CAGGCTATCG GCGCATGGTG 
ATTCCAACCC AACCCCCTCT TACCGCCACC AAGAAATCCA CCCCGAAACC ACAGGCGCCT 
CAAAACGTCA CTCCACCAGC TTCATCTTCT CCAAGACCCC AGTACCAGCC TGCACCCCAG 
CCTGTTCCAG CATCCTACAC CACCGCCTCC ACACCGAGCC AGCCCACCTT CAATGTTCAG 
GTGAGGGCTG CTCAGCCTGC CCCTCAGCAG CAACCGGTGC GTGGTCCAGG ACAGGTACAG 
TACATGCCGG CTCAACCCAG AGCTCCAGAA TTCGCATATG GGCCTCCACA ACCTGGATTC 
TGCCCTGCTC CATCTGGAGG CTACCAGGAC CAGCATTATG GTGGAGCTCC TGGTTATGGA 
GGACAGAACA CATGGAGGGC TGAACCGAGC CACCACCCTG CTCCAACACC CAGCCAAGGG 
TACCAGCCCG CTCCTCCCAA AAAAACCTAC ATCACTGACC CTCCTGCCAG CCTGGCACCC 
TTCGCTGGTG GGTCCTCTGC TCCTCATAAG GGTCGTCCAG AGGAGGAACT GGACCGCTTG 
ACTAAGAAGA TGCTGTATGA CATGGATAAT CCCCCATCTG AGGAGTATTT CGGTCGGTGT 
TCAAGCTGTG GGGAGAATGT GGTTGGCGAG GGCACAGGTT GTACCGCCAT GGACCAGGTC 
TTCCATGTGG ACTGCTTCAT CTGCATGACC TGTGGCTCTA AGCTAAGAGG GAAGCCCTTT 
TATGCCGTGG AGAAGAAGGC TTACTGTGAA CCCTGCTATA TCAACACTCT GGAGACCTGC 
AACATATGTT ATAAGCCCAT AATGGAGCGC ATTCTGAGGG CTACTGGGAA GGCCTATCAT 
CCCCAGTGCT TCACCTGCGT GGTCTGCCAT CGGAGTCTGG ACGGCATTCC CTTTACTGTG 
GATGCCTCCA ACCACATCCA CTGCATCGAG GACTTTCACA AGAAATTTGC TCCTCGTTGC 
TCTGTGTGTA ACGAGCCCAT AATGCCAGCA CCTGGTCAGG AGGAGACCGT GCGTATTGTT 
GCCTTAGACC GTGACTTCCA TGTGCAGTGC TATCGCTGTG AGGATTGCGG CTGTCTTCTC 
TCTGAGGGAG ACAACCAGGG TTGTTACCCT CTGGATGGCC ATGTCCTCTG CAAAAACTGC 
AACACCAGTC GCATCCAGGC CCTCACCGCC AAGGCCACGA CTGACCTCTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_957492.1
CDS	209..1879
Translation	MWGGHNDGDQQGHVSARMETSLPMGTTSISISQQQAPKKFAPVVAPKPKFNPYKQPGDATHEGDYPPPPPPVVDPSGLPSPSSFPPPPPMDETSLGFQIKGPEKTLEERRSSLDAEIDSLTSILADLESSSPYKPRTQQNSASPAATGSTAPVTGYRRMVIPTQPPLTATKKSTPKPQAPQNVTPPASSSPRPQYQPAPQPVPASYTTASTPSQPTFNVQVRAAQPAPQQQPVRGPGQVQYMPAQPRAPEFAYGPPQPGFCPAPSGGYQDQHYGGAPGYGGQNTWRAEPSHHPAPTPSQGYQPAPPKKTYITDPPASLAPFAGGSSAPHKGRPEEELDRLTKKMLYDMDNPPSEEYFGRCSSCGENVVGEGTGCTAMDQVFHVDCFICMTCGSKLRGKPFYAVEKKAYCEPCYINTLETCNICYKPIMERILRATGKAYHPQCFTCVVCHRSLDGIPFTVDASNHIHCIEDFHKKFAPRCSVCNEPIMPAPGQEETVRIVALDRDFHVQCYRCEDCGCLLSEGDNQGCYPLDGHVLCKNCNTSRIQALTAKATTDL

Target ORF information:

RefSeq Version	NM_201198.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio LIM domain containing preferred translocation partner in lipoma (lpp), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_201198.1

ORF Insert Sequence:

ATGTGGGGCG GACATAATGA TGGTGACCAG CAAGGTCATG TGAGTGCTCG AATGGAGACC 
AGCTTACCCA TGGGTACAAC CAGCATTTCT ATATCCCAGC AGCAGGCTCC GAAAAAGTTT 
GCCCCTGTTG TGGCTCCCAA ACCCAAGTTC AACCCTTATA AACAACCCGG GGATGCAACA 
CACGAGGGTG ACTATCCTCC ACCTCCTCCA CCTGTGGTTG ACCCCAGTGG GCTGCCCTCC 
CCTTCTAGCT TCCCACCTCC TCCACCCATG GATGAGACTT CTCTTGGCTT TCAGATAAAA 
GGACCTGAGA AAACTCTAGA AGAGAGACGC TCCAGTCTGG ATGCTGAGAT TGATTCGCTG 
ACCAGTATCC TGGCTGACCT AGAGAGCAGT TCACCTTATA AACCGCGCAC ACAGCAGAAT 
TCTGCCAGTC CTGCTGCAAC AGGCTCTACC GCCCCTGTTA CAGGCTATCG GCGCATGGTG 
ATTCCAACCC AACCCCCTCT TACCGCCACC AAGAAATCCA CCCCGAAACC ACAGGCGCCT 
CAAAACGTCA CTCCACCAGC TTCATCTTCT CCAAGACCCC AGTACCAGCC TGCACCCCAG 
CCTGTTCCAG CATCCTACAC CACCGCCTCC ACACCGAGCC AGCCCACCTT CAATGTTCAG 
GTGAGGGCTG CTCAGCCTGC CCCTCAGCAG CAACCGGTGC GTGGTCCAGG ACAGGTACAG 
TACATGCCGG CTCAACCCAG AGCTCCAGAA TTCGCATATG GGCCTCCACA ACCTGGATTC 
TGCCCTGCTC CATCTGGAGG CTACCAGGAC CAGCATTATG GTGGAGCTCC TGGTTATGGA 
GGACAGAACA CATGGAGGGC TGAACCGAGC CACCACCCTG CTCCAACACC CAGCCAAGGG 
TACCAGCCCG CTCCTCCCAA AAAAACCTAC ATCACTGACC CTCCTGCCAG CCTGGCACCC 
TTCGCTGGTG GGTCCTCTGC TCCTCATAAG GGTCGTCCAG AGGAGGAACT GGACCGCTTG 
ACTAAGAAGA TGCTGTATGA CATGGATAAT CCCCCATCTG AGGAGTATTT CGGTCGGTGT 
TCAAGCTGTG GGGAGAATGT GGTTGGCGAG GGCACAGGTT GTACCGCCAT GGACCAGGTC 
TTCCATGTGG ACTGCTTCAT CTGCATGACC TGTGGCTCTA AGCTAAGAGG GAAGCCCTTT 
TATGCCGTGG AGAAGAAGGC TTACTGTGAA CCCTGCTATA TCAACACTCT GGAGACCTGC 
AACATATGTT ATAAGCCCAT AATGGAGCGC ATTCTGAGGG CTACTGGGAA GGCCTATCAT 
CCCCAGTGCT TCACCTGCGT GGTCTGCCAT CGGAGTCTGG ACGGCATTCC CTTTACTGTG 
GATGCCTCCA ACCACATCCA CTGCATCGAG GACTTTCACA AGAAATTTGC TCCTCGTTGC 
TCTGTGTGTA ACGAGCCCAT AATGCCAGCA CCTGGTCAGG AGGAGACCGT GCGTATTGTT 
GCCTTAGACC GTGACTTCCA TGTGCAGTGC TATCGCTGTG AGGATTGCGG CTGTCTTCTC 
TCTGAGGGAG ACAACCAGGG TTGTTACCCT CTGGATGGCC ATGTCCTCTG CAAAAACTGC 
AACACCAGTC GCATCCAGGC CCTCACCGCC AAGGCCACGA CTGACCTCTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Rbfox-regulated alternative splicing is critical for zebrafish cardiac and skeletal muscle functions.
Developmental biology359(2)251-61(2011 Nov)
Gallagher TL,Arribere JA,Geurts PA,Exner CR,McDonald KL,Dill KK,Marr HL,Adkar SS,Garnett AT,Amacher SL,Conboy JG

Comprehensive profiling of zebrafish hepatic proximal promoter CpG island methylation and its modification during chemical carcinogenesis.
BMC genomics123(2011 Jan)
Mirbahai L,Williams TD,Zhan H,Gong Z,Chipman JK

Lpp is involved in Wnt/PCP signaling and acts together with Scrib to mediate convergence and extension movements during zebrafish gastrulation.
Developmental biology320(1)267-77(2008 Aug)
Vervenne HB,Crombez KR,Lambaerts K,Carvalho L,K?ppen M,Heisenberg CP,Van de Ven WJ,Petit MM