capn7 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	capn7
Entrez Gene ID	556792
Full Name	calpain 7
General protein information	Preferred Names calpain 7 Names calpain-7
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001135108.2	NP_001128580.1	calpain-7

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	CAPN7	XP_001158948.1
Bos taurus (cattle)	CAPN7	NP_001180110.1
Magnaporthe oryzae (rice blast fungus)	MGG_06335	XP_003717247.1
Homo sapiens (human)	CAPN7	NP_055111.1
Mus musculus (house mouse)	Capn7	NP_033926.1
Danio rerio (zebrafish)	capn7	NP_001128580.1
Neurospora crassa	NCU00317	XP_957788.1
	CAPN7	XP_001082446.2
Rattus norvegicus (Norway rat)	Capn7	NP_001025208.1
Xenopus tropicalis (tropical clawed frog)	capn7	NP_998853.1
Canis lupus familiaris (dog)	CAPN7	XP_851263.1
Gallus gallus (chicken)	CAPN7	XP_418783.3
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP010834	XP_309874.4
Caenorhabditis elegans (roundworm)	clp-2	NP_497964.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Phenotype anchoring in zebrafish reveals a potential role for matrix metalloproteinases (MMPs) in tamoxifen's effects on skin epithelium.
Bugel SM, Wehmas LC, La Du JK, Tanguay RL
Toxicology and applied pharmacology29631-41(2016 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following capn7 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the capn7 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa33575	NM_001135108.2 Latest version!	Danio rerio calpain 7 (capn7), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

capn7 ( NM_001135108.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001128580.1 Danio rerio calpain 7 (capn7), mRNA.

Price & Availability↑

CloneID	ODa33575
Clone ID Related Accession (Same CDS sequence)	NM_001135108.2
Accession Version	NM_001135108.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2448bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-08-17
Organism	Danio rerio(zebrafish)
Product	calpain-7
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC167953.1. On Aug 30, 2012 this sequence version replaced NM_001135108.1. ##Evidence-Data-START## Transcript exon combination :: BC167953.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGGATTGTA CAGCTCTTGA GCTCGACGCT ATTAAATTTG CCAAATCAGC TGTTTTGTAT 
GATCAACGAG GGAAATACAA TGAAGCTGTT TTCTACTATA AGGAGGCTGC CCAGGCCCTC 
ATCTATGCAG GGATGGCTGG ATCCAAACTA GAGAACATTC AAGACAAGGT GAACGAGTAC 
CTGGACAGAG TACAGACTCT TCTCAGTGCT GTTCAAGCAC AGAGCAGTGA CCCTTTGAAG 
AGCAAGCATC AGCTGGATCT GGAAAGAGCG TATTTCCTGG TGACACAGGC TTTTGAAGAG 
GATGAGAAGG AAAACGCGGA TGAGGCCATT GAGCTCTACA CTCAGGCTGT AGAGTTGTGC 
ATTCAAGCGT CCAATGAGAC GTCAGATCCA GCGCTACAGG CGAAACTGAA GCAGCTTGCT 
CGACAGGCTC TTGATAGGGC AGAGGGACTG AAAGACTCTG TTAGTAAACC TGCAAGCCAG 
GACAAGCCCG GCTCATCTGC ATCTAAAGGC CCTGCTCAGG TTAGACAGTT CTTTCCACTC 
GGTCCAGACT TCTCTATCCA TGACAAAGCT CAGCCGGTGC GAGCAGCACA GTCCAGTGAG 
CCGCAGGGCC AGCGTTACAC GGCCGAGGAG ATCGAGGTGC TCAGGAAGAC CTCCAAGGTA 
AATGGGATTG AATATGTTCC CTTCATGAGT GTTGACCTGA GGGAGCGTTT TGCTTTTCCT 
GTTCCGTTCT CTGACAAATG TGGGAAACTG GCACTGTCGC CGAAGCAGAG AGCCATATTT 
TCTCGCTGGG TTCGACCTGA TGACATCTGC AATAACCCCA CAATGATCTT CACTGTGTCC 
AGCTTCAGCA TCAAGCAGAC GGTTGTGTCG GACTGTTCTT TTGTTGCATC ATTGGCCATC 
AGCGCAGCAT ACGAGAGACG CTACAGCAAA AAGTTAATCA CAAGCATCAT CTACCCGCAG 
AACAGAAAAG GAGAGCCAGA GTATAACCCC TGTGGGAAGT ACATGGTGAA GCTTCATATT 
AATGGCGTCC CAAGAAAGGT GATCATTGAC GATTTTCTCC CGGTGGACCG CAATGGTGAG 
CTGCTTTGCT CCTACTCAAG TAATCGCAAT GAACTCTGGG TATCGCTCAT CGAGAAGGCC 
TACATGAAGG TTATGGGTGG ATATGATTTC CCTGGCTCCA ACTCTAATAT TGATTTACAC 
GCTCTCACTG GCTGGATCCC AGAGCGTATT GCTATGCACT CAGACAATCA GTCCTTTAAC 
AAAGATGACA CTTTCCGCAT GCTTTACCAG AGGTTTCATA GAGGAGATGT TCTCATCACA 
ACCGCCACAG GGGTCATGAC AGAAGAGGAG GGCGAGAGAT GGGGTTTAGT GCCCACACAT 
GCTTACGCCG TACTAGATAT CAGGCAATAC AAGGATAAAC GTTTCCTCCA GCTGAAGAAC 
CCGTGGAGTC ACCTCAGGTG GAAAGGCAGC TATAGCGAAC GTGATGAAAA AAACTGGACA 
CCAGATCTTC TCAAATACCT CAATTTTGAC CCCAAAACCG CACAGAAGTT TGACAATGGG 
GTGTTTTGGA TTATCTGGGA AGACTTGTGC CAGTATTACG ACGTCATCTA CTTGAGCTGG 
AATCCTGCGC TGTTCAAAGA GTCCTCATGT ATTCACAGTA GCTGGGATGG CAAACAGGGA 
CCAGTGAAGG ACGTCTACAG TTTGGCCAAT AACCCTCAGT ACAAGCTGGA GGTGCAGTGT 
CCTCAAGGGG GCGCTGCTGT ATGGGTACTG CTGACTAGAC ACATCACTGA CAAGGATGAC 
TTTGCTCAAA ACCGGGAGTT TATTACGTTA GTGGTTTACA AGACTAATGG AAAGAAAGTT 
TACTATCCAG CTGAACCTCC TCCCTACATT GATGGCATCA GGATCAACAG CCCTCACTAC 
TTAACCAAGA TTAAGCTGAC CAGTCCAGGA ACACACACCT TTACACTCGT GGTCTCCCAG 
TATGAGAAAC AAAACACCAT CAACTACACA TTAAGAGTGT ACTCGGTGTG CAAATTTAAT 
TTCTCCAAAA TCCCAACACC CTTCACCAAC ACCAAAAGGA TTAATGGCCA ATGGAAGGGT 
GCCAGCGCTG GAGGATGTGG GAATTACAAA GACACCTACA AGAACAACCC CATATACCAG 
CTCAACATGG AGAAACCAGG CCCTCTGCTC ATTGAACTCC GCGGCTCCAG GCAGTACAGT 
GTGGGCTTTG AGGTGGTGAC CGTATCGACT ACGGGGGATT CTGGATCATC AGGCTTTCAA 
AAGAGAGCGA GCGGAGATTA CCGATGCGGT TTTTGCTACA TGGAGGTTGA GAGTTTACCT 
GCTGGGATTT ACAATGTCAT CCCTACGACC TTCCTGCCCA AACAGGAAGG CCCATTTTTC 
CTGGACTTCA GCAGTGTCGC CCCGCTGCGG GTTTCTCAGC TGCAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001128580.1
CDS	293..2740
Translation	MDCTALELDAIKFAKSAVLYDQRGKYNEAVFYYKEAAQALIYAGMAGSKLENIQDKVNEYLDRVQTLLSAVQAQSSDPLKSKHQLDLERAYFLVTQAFEEDEKENADEAIELYTQAVELCIQASNETSDPALQAKLKQLARQALDRAEGLKDSVSKPASQDKPGSSASKGPAQVRQFFPLGPDFSIHDKAQPVRAAQSSEPQGQRYTAEEIEVLRKTSKVNGIEYVPFMSVDLRERFAFPVPFSDKCGKLALSPKQRAIFSRWVRPDDICNNPTMIFTVSSFSIKQTVVSDCSFVASLAISAAYERRYSKKLITSIIYPQNRKGEPEYNPCGKYMVKLHINGVPRKVIIDDFLPVDRNGELLCSYSSNRNELWVSLIEKAYMKVMGGYDFPGSNSNIDLHALTGWIPERIAMHSDNQSFNKDDTFRMLYQRFHRGDVLITTATGVMTEEEGERWGLVPTHAYAVLDIRQYKDKRFLQLKNPWSHLRWKGSYSERDEKNWTPDLLKYLNFDPKTAQKFDNGVFWIIWEDLCQYYDVIYLSWNPALFKESSCIHSSWDGKQGPVKDVYSLANNPQYKLEVQCPQGGAAVWVLLTRHITDKDDFAQNREFITLVVYKTNGKKVYYPAEPPPYIDGIRINSPHYLTKIKLTSPGTHTFTLVVSQYEKQNTINYTLRVYSVCKFNFSKIPTPFTNTKRINGQWKGASAGGCGNYKDTYKNNPIYQLNMEKPGPLLIELRGSRQYSVGFEVVTVSTTGDSGSSGFQKRASGDYRCGFCYMEVESLPAGIYNVIPTTFLPKQEGPFFLDFSSVAPLRVSQLQ

Target ORF information:

RefSeq Version	NM_001135108.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio calpain 7 (capn7), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001135108.2

ORF Insert Sequence:

ATGGATTGTA CAGCTCTTGA GCTCGACGCT ATTAAATTTG CCAAATCAGC TGTTTTGTAT 
GATCAACGAG GGAAATACAA TGAAGCTGTT TTCTACTATA AGGAGGCTGC CCAGGCCCTC 
ATCTATGCAG GGATGGCTGG ATCCAAACTA GAGAACATTC AAGACAAGGT GAACGAGTAC 
CTGGACAGAG TACAGACTCT TCTCAGTGCT GTTCAAGCAC AGAGCAGTGA CCCTTTGAAG 
AGCAAGCATC AGCTGGATCT GGAAAGAGCG TATTTCCTGG TGACACAGGC TTTTGAAGAG 
GATGAGAAGG AAAACGCGGA TGAGGCCATT GAGCTCTACA CTCAGGCTGT AGAGTTGTGC 
ATTCAAGCGT CCAATGAGAC GTCAGATCCA GCGCTACAGG CGAAACTGAA GCAGCTTGCT 
CGACAGGCTC TTGATAGGGC AGAGGGACTG AAAGACTCTG TTAGTAAACC TGCAAGCCAG 
GACAAGCCCG GCTCATCTGC ATCTAAAGGC CCTGCTCAGG TTAGACAGTT CTTTCCACTC 
GGTCCAGACT TCTCTATCCA TGACAAAGCT CAGCCGGTGC GAGCAGCACA GTCCAGTGAG 
CCGCAGGGCC AGCGTTACAC GGCCGAGGAG ATCGAGGTGC TCAGGAAGAC CTCCAAGGTA 
AATGGGATTG AATATGTTCC CTTCATGAGT GTTGACCTGA GGGAGCGTTT TGCTTTTCCT 
GTTCCGTTCT CTGACAAATG TGGGAAACTG GCACTGTCGC CGAAGCAGAG AGCCATATTT 
TCTCGCTGGG TTCGACCTGA TGACATCTGC AATAACCCCA CAATGATCTT CACTGTGTCC 
AGCTTCAGCA TCAAGCAGAC GGTTGTGTCG GACTGTTCTT TTGTTGCATC ATTGGCCATC 
AGCGCAGCAT ACGAGAGACG CTACAGCAAA AAGTTAATCA CAAGCATCAT CTACCCGCAG 
AACAGAAAAG GAGAGCCAGA GTATAACCCC TGTGGGAAGT ACATGGTGAA GCTTCATATT 
AATGGCGTCC CAAGAAAGGT GATCATTGAC GATTTTCTCC CGGTGGACCG CAATGGTGAG 
CTGCTTTGCT CCTACTCAAG TAATCGCAAT GAACTCTGGG TATCGCTCAT CGAGAAGGCC 
TACATGAAGG TTATGGGTGG ATATGATTTC CCTGGCTCCA ACTCTAATAT TGATTTACAC 
GCTCTCACTG GCTGGATCCC AGAGCGTATT GCTATGCACT CAGACAATCA GTCCTTTAAC 
AAAGATGACA CTTTCCGCAT GCTTTACCAG AGGTTTCATA GAGGAGATGT TCTCATCACA 
ACCGCCACAG GGGTCATGAC AGAAGAGGAG GGCGAGAGAT GGGGTTTAGT GCCCACACAT 
GCTTACGCCG TACTAGATAT CAGGCAATAC AAGGATAAAC GTTTCCTCCA GCTGAAGAAC 
CCGTGGAGTC ACCTCAGGTG GAAAGGCAGC TATAGCGAAC GTGATGAAAA AAACTGGACA 
CCAGATCTTC TCAAATACCT CAATTTTGAC CCCAAAACCG CACAGAAGTT TGACAATGGG 
GTGTTTTGGA TTATCTGGGA AGACTTGTGC CAGTATTACG ACGTCATCTA CTTGAGCTGG 
AATCCTGCGC TGTTCAAAGA GTCCTCATGT ATTCACAGTA GCTGGGATGG CAAACAGGGA 
CCAGTGAAGG ACGTCTACAG TTTGGCCAAT AACCCTCAGT ACAAGCTGGA GGTGCAGTGT 
CCTCAAGGGG GCGCTGCTGT ATGGGTACTG CTGACTAGAC ACATCACTGA CAAGGATGAC 
TTTGCTCAAA ACCGGGAGTT TATTACGTTA GTGGTTTACA AGACTAATGG AAAGAAAGTT 
TACTATCCAG CTGAACCTCC TCCCTACATT GATGGCATCA GGATCAACAG CCCTCACTAC 
TTAACCAAGA TTAAGCTGAC CAGTCCAGGA ACACACACCT TTACACTCGT GGTCTCCCAG 
TATGAGAAAC AAAACACCAT CAACTACACA TTAAGAGTGT ACTCGGTGTG CAAATTTAAT 
TTCTCCAAAA TCCCAACACC CTTCACCAAC ACCAAAAGGA TTAATGGCCA ATGGAAGGGT 
GCCAGCGCTG GAGGATGTGG GAATTACAAA GACACCTACA AGAACAACCC CATATACCAG 
CTCAACATGG AGAAACCAGG CCCTCTGCTC ATTGAACTCC GCGGCTCCAG GCAGTACAGT 
GTGGGCTTTG AGGTGGTGAC CGTATCGACT ACGGGGGATT CTGGATCATC AGGCTTTCAA 
AAGAGAGCGA GCGGAGATTA CCGATGCGGT TTTTGCTACA TGGAGGTTGA GAGTTTACCT 
GCTGGGATTT ACAATGTCAT CCCTACGACC TTCCTGCCCA AACAGGAAGG CCCATTTTTC 
CTGGACTTCA GCAGTGTCGC CCCGCTGCGG GTTTCTCAGC TGCAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

Phenotype anchoring in zebrafish reveals a potential role for matrix metalloproteinases (MMPs) in tamoxifen's effects on skin epithelium.
Toxicology and applied pharmacology29631-41(2016 Apr)
Bugel SM,Wehmas LC,La Du JK,Tanguay RL